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OFFICE OF SCHOLARLY COMMUNICATIONS
Science in the Time of Openness
Dr. Bruce Herbert, Director
Office of Scholarly Communications
OFFICE OF SCHOLARLY COMMUNICATIONS
Science Has Evolved
OFFICE OF SCHOLARLY COMMUNICATIONS
The Fourth Paradigm:
Early Information Technology Influences
on My Career as a Scientist
Dooge, J.C.I. 1986. Looking for hydrologic laws.
Water Resourc. Res. 22(9)46S-58S.
1980’s
1990’s
OFFICE OF SCHOLARLY COMMUNICATIONS
The Fourth Paradigm:
Data-Intensive Scientific Discovery
“In Jim Gray’s last talk to the Computer Science
and Telecommunications Board on January 11,
2007, he described his vision of the fourth
paradigm of scientific research.
He outlined a two-part plea for the funding of
tools for data capture, curation, and analysis,
and for a communication and publication
infrastructure.
He argued for the establishment of modern
stores for data and documents that are on par
with traditional libraries.”
http://research.microsoft.com/en-us/collaboration/fourthparadigm/
OFFICE OF SCHOLARLY COMMUNICATIONS
Jim Gray on eScience:
A Transformed Scientific Method
Cyber-
infrastructure
Networking
Technologies
Policies & Laws
Disciplinary Practices
Collaboration
Communication
Across Space & Time
Data Management
Data Analysis
Access
Dissemination
OFFICE OF SCHOLARLY COMMUNICATIONS
Team Collaboration: Coauthorship
Milojevic (2014). PNAS 111(11): 3984-3989.
OFFICE OF SCHOLARLY COMMUNICATIONS
Wuchty et al. (2007).
Science 316(5827):
1036-1039.
Impact of Team
Collaboration
OFFICE OF SCHOLARLY COMMUNICATIONS
Collaboration Across Institutions
Jones et al. (2008). Science 322: 1259-1262.
OFFICE OF SCHOLARLY COMMUNICATIONS
Science in the Age of Openness
OFFICE OF SCHOLARLY COMMUNICATIONS
Challenges Remain
■ Open access
■ Data management &
access
■ Public engagement
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Access
OFFICE OF SCHOLARLY COMMUNICATIONS
Emerging Issue: Open Access
Open Access
■ Open Access literature is digital, online, free
of charge, and free of most copyright and
licensing restrictions
■ Works are still covered by copyright law, but
Open Access terms apply to allow sharing
and reuse
■ All major OA initiatives for scientific and
scholarly literature insist on the importance
of peer review
A movement in higher education to increase access to scholarly research and
communication, not limiting it solely to subscribers or purchasers of works.
http://sparc.arl.org/issues/open-access
Texas A&M University
A Land Grant, Space Grant, and
Sea Grant Institution
OFFICE OF SCHOLARLY COMMUNICATIONS
Emerging Issue: Open Access
Federal Mandates For Public Access to Research
Publication repositories
Tools to create data
management plans
Data repositories (soon)
http://www.whitehouse.gov/blog/2013/02/22/expanding-
public-access-results-federally-funded-research
The Library Supports:
http://guides.library.tamu.edu/
DataManagement
OFFICE OF SCHOLARLY COMMUNICATIONS
Impact of Open Access on
Citation Rates
The report: http://www.nature.com/press_releases/ncommsreport2014.pdf
The Research Information
Network, a British
research center, recently
analyzed the distribution
and impact of articles
published in hybrid
science journal Nature
Communications.
0
500
1000
1500
2000
2500
30 day views 180 views 30 day
downloads
180 day
downloads
Frequency
Median Frequency Use of Nature Communications
Articles
Subscription Articles OA Articles
OFFICE OF SCHOLARLY COMMUNICATIONS
Impact of Open Access on
Citation Rates
The report: http://www.nature.com/press_releases/ncommsreport2014.pdf
The Research Information Network, a British research center, recently analyzed the distribution
and impact of articles published in hybrid science journal Nature Communications.
OFFICE OF SCHOLARLY COMMUNICATIONS
Data Management & Access
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Data
Open Sharing of the Paper and the Data
https://peerj.com/articles/182/#su
pplemental-information
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Data
Open Sharing of
the Paper and the
Data
http://figshare.com/articles/Segm
entation_data_for_braincase_of_P
arasaurolophus_sp_Hadrosauridae
_Dinosauria_/664171
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Data
Open Sharing of
the Paper and
the Data
http://dinosaurjoe.org/joes-
bones/digital-joe/joes-skull-
reconstruction/
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Data
Open Sharing of
the Paper and
the Data
http://journals.plos.org/plosone/arti
cle?id=10.1371/journal.pone.000030
8
OFFICE OF SCHOLARLY COMMUNICATIONS
Public Engagement
OFFICE OF SCHOLARLY COMMUNICATIONS
Roscoe Collegiate High School
■ Roscoe Collegiate became the
first rural Early College in Texas
in 2009 – a college readiness
program
■ Intent of the Roscoe Collegiate
Model
■ Each student to complete the
Associate Degree as an
indicator of college readiness,
■ Students earn a STEM field
endorsement as an indicator
of workforce readiness.
http://www.wtc.edu/students/distancelearni
ng/roscoecollegiate.html
OFFICE OF SCHOLARLY COMMUNICATIONS
Roscoe Collegiate Capstone STEM Research
Experience
■ As alternatives to standardize testing, students engage in
authentic research projects
■ Student-led questioning, data collection and analysis,
poster development & presentation
■ All students in grades 3-11 conduct 4H-based (agricultural)
research projects
■ Grade 12 year-long, career path relevant capstone
research project.
■ Bond approval to construct STEM Research Center
OFFICE OF SCHOLARLY COMMUNICATIONS
Open Access to Knowledge Search (OAKSearch)
■ “It was very helpful to me
as I used it for writing
some curriculum material.
■ Another teacher I know
used it for her work on her
masters degree.
■ We used it in our college
readiness program to
teach students the
differences between lower
level sources and academic
sources.
■ Lastly, our STEM research
class students used it to
find sources!“
http://library.tamu.edu/oaksearch/
QR Code
OFFICE OF SCHOLARLY COMMUNICATIONS
Take Action
OFFICE OF SCHOLARLY COMMUNICATIONS
Online Identity & Scholarly Profile
OFFICE OF SCHOLARLY COMMUNICATIONS
Online Identity and Scholarly Profile
Tell Your Story
Build an Online Profile
Know Your Impact
OFFICE OF SCHOLARLY COMMUNICATIONS
The research community has
lacked the ability to link
researchers and scholars with
their professional activities.
28
Emerging Issue: Identity & Reputation
Scholarly Identity on the Internet
• Name ambiguity
• Discoverability within and across databases
• Author, grantee, and faculty record management
• Output tracking
• Research reporting and impact assessment
OFFICE OF SCHOLARLY COMMUNICATIONS
The research community has
lacked the ability to link
researchers and scholars with
their professional activities.
29
Emerging Issue: Identity & Reputation
Scholarly Identity on the Internet
• Name ambiguity
• Discoverability within and across databases
• Author, grantee, and faculty record management
• Output tracking
• Research reporting and impact assessment
OFFICE OF SCHOLARLY COMMUNICATIONS
Emerging Issue: Identity & Reputation
ORCIDs
http://orcid.org/
OFFICE OF SCHOLARLY COMMUNICATIONS
“Nature journals authors can link
their ORCID to their account in our
manuscript submission and
tracking system, and we[are now]
publishing authors’ ORCIDs in
papers.”
ORCID iDs are being received by
CrossRef and PubMed
Diehl LA, Souza RM, Alves JB, Gordan PA, Esteves RZ, Jorge ML, Coelho IC. InsuOnline, a Serious Game to
Teach Insulin Therapy to Primary Care Physicians: Design of the Game and a Randomized Controlled Trial for
Educational Validation. JMIR Res Protoc. 2013 Jan 21;2(1):e5. doi: 10.2196/resprot.2431. PubMed PMID:
23612462, AUID- ORCID: 0000-0002-9958-7213
31
Emerging Issue: Identity & Reputation
ORCIDs in the Publication Process
OFFICE OF SCHOLARLY COMMUNICATIONS
Import information
from ORCID record
Link grant application to
ORCID identifier
The U.S. National Institutes of
Health (NIH) SciENcv includes
ORCID iDs
32
Emerging Issue: Identity & Reputation
ORCIDs in the Grant Application Process
OFFICE OF SCHOLARLY COMMUNICATIONS
Publish as Open Access
OFFICE OF SCHOLARLY COMMUNICATIONS
OAK Trust:
TAMU’s
Institutional
Repository
http://repository.tamu.edu/
OFFICE OF SCHOLARLY COMMUNICATIONS
OAK Fund: Funding Publication in OA Journals
http://scholarlycommunication.library.tamu.edu/oak-fund/
OFFICE OF SCHOLARLY COMMUNICATIONS
National Science Foundation Broader Impacts
Open Access Textbooks Project
Source: www.goa.gov/products/GAO-13-368
OFFICE OF SCHOLARLY COMMUNICATIONS
National Science Foundation Broader Impacts
Open Access Textbooks Project
http://openstaxcollege.org/
■ Review Existing
Textbooks
■ Adopt an OA Textbook
■ NSF Broader Impacts
■ Write Chapter
■ Develop digital
collection
OFFICE OF SCHOLARLY COMMUNICATIONS
Partner with the Library

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Science in the Time of Openness

  • 1. OFFICE OF SCHOLARLY COMMUNICATIONS Science in the Time of Openness Dr. Bruce Herbert, Director Office of Scholarly Communications
  • 2. OFFICE OF SCHOLARLY COMMUNICATIONS Science Has Evolved
  • 3. OFFICE OF SCHOLARLY COMMUNICATIONS The Fourth Paradigm: Early Information Technology Influences on My Career as a Scientist Dooge, J.C.I. 1986. Looking for hydrologic laws. Water Resourc. Res. 22(9)46S-58S. 1980’s 1990’s
  • 4. OFFICE OF SCHOLARLY COMMUNICATIONS The Fourth Paradigm: Data-Intensive Scientific Discovery “In Jim Gray’s last talk to the Computer Science and Telecommunications Board on January 11, 2007, he described his vision of the fourth paradigm of scientific research. He outlined a two-part plea for the funding of tools for data capture, curation, and analysis, and for a communication and publication infrastructure. He argued for the establishment of modern stores for data and documents that are on par with traditional libraries.” http://research.microsoft.com/en-us/collaboration/fourthparadigm/
  • 5. OFFICE OF SCHOLARLY COMMUNICATIONS Jim Gray on eScience: A Transformed Scientific Method Cyber- infrastructure Networking Technologies Policies & Laws Disciplinary Practices Collaboration Communication Across Space & Time Data Management Data Analysis Access Dissemination
  • 6. OFFICE OF SCHOLARLY COMMUNICATIONS Team Collaboration: Coauthorship Milojevic (2014). PNAS 111(11): 3984-3989.
  • 7. OFFICE OF SCHOLARLY COMMUNICATIONS Wuchty et al. (2007). Science 316(5827): 1036-1039. Impact of Team Collaboration
  • 8. OFFICE OF SCHOLARLY COMMUNICATIONS Collaboration Across Institutions Jones et al. (2008). Science 322: 1259-1262.
  • 9. OFFICE OF SCHOLARLY COMMUNICATIONS Science in the Age of Openness
  • 10. OFFICE OF SCHOLARLY COMMUNICATIONS Challenges Remain ■ Open access ■ Data management & access ■ Public engagement
  • 11. OFFICE OF SCHOLARLY COMMUNICATIONS Open Access
  • 12. OFFICE OF SCHOLARLY COMMUNICATIONS Emerging Issue: Open Access Open Access ■ Open Access literature is digital, online, free of charge, and free of most copyright and licensing restrictions ■ Works are still covered by copyright law, but Open Access terms apply to allow sharing and reuse ■ All major OA initiatives for scientific and scholarly literature insist on the importance of peer review A movement in higher education to increase access to scholarly research and communication, not limiting it solely to subscribers or purchasers of works. http://sparc.arl.org/issues/open-access Texas A&M University A Land Grant, Space Grant, and Sea Grant Institution
  • 13. OFFICE OF SCHOLARLY COMMUNICATIONS Emerging Issue: Open Access Federal Mandates For Public Access to Research Publication repositories Tools to create data management plans Data repositories (soon) http://www.whitehouse.gov/blog/2013/02/22/expanding- public-access-results-federally-funded-research The Library Supports: http://guides.library.tamu.edu/ DataManagement
  • 14. OFFICE OF SCHOLARLY COMMUNICATIONS Impact of Open Access on Citation Rates The report: http://www.nature.com/press_releases/ncommsreport2014.pdf The Research Information Network, a British research center, recently analyzed the distribution and impact of articles published in hybrid science journal Nature Communications. 0 500 1000 1500 2000 2500 30 day views 180 views 30 day downloads 180 day downloads Frequency Median Frequency Use of Nature Communications Articles Subscription Articles OA Articles
  • 15. OFFICE OF SCHOLARLY COMMUNICATIONS Impact of Open Access on Citation Rates The report: http://www.nature.com/press_releases/ncommsreport2014.pdf The Research Information Network, a British research center, recently analyzed the distribution and impact of articles published in hybrid science journal Nature Communications.
  • 16. OFFICE OF SCHOLARLY COMMUNICATIONS Data Management & Access
  • 17. OFFICE OF SCHOLARLY COMMUNICATIONS Open Data Open Sharing of the Paper and the Data https://peerj.com/articles/182/#su pplemental-information
  • 18. OFFICE OF SCHOLARLY COMMUNICATIONS Open Data Open Sharing of the Paper and the Data http://figshare.com/articles/Segm entation_data_for_braincase_of_P arasaurolophus_sp_Hadrosauridae _Dinosauria_/664171
  • 19. OFFICE OF SCHOLARLY COMMUNICATIONS Open Data Open Sharing of the Paper and the Data http://dinosaurjoe.org/joes- bones/digital-joe/joes-skull- reconstruction/
  • 20. OFFICE OF SCHOLARLY COMMUNICATIONS Open Data Open Sharing of the Paper and the Data http://journals.plos.org/plosone/arti cle?id=10.1371/journal.pone.000030 8
  • 21. OFFICE OF SCHOLARLY COMMUNICATIONS Public Engagement
  • 22. OFFICE OF SCHOLARLY COMMUNICATIONS Roscoe Collegiate High School ■ Roscoe Collegiate became the first rural Early College in Texas in 2009 – a college readiness program ■ Intent of the Roscoe Collegiate Model ■ Each student to complete the Associate Degree as an indicator of college readiness, ■ Students earn a STEM field endorsement as an indicator of workforce readiness. http://www.wtc.edu/students/distancelearni ng/roscoecollegiate.html
  • 23. OFFICE OF SCHOLARLY COMMUNICATIONS Roscoe Collegiate Capstone STEM Research Experience ■ As alternatives to standardize testing, students engage in authentic research projects ■ Student-led questioning, data collection and analysis, poster development & presentation ■ All students in grades 3-11 conduct 4H-based (agricultural) research projects ■ Grade 12 year-long, career path relevant capstone research project. ■ Bond approval to construct STEM Research Center
  • 24. OFFICE OF SCHOLARLY COMMUNICATIONS Open Access to Knowledge Search (OAKSearch) ■ “It was very helpful to me as I used it for writing some curriculum material. ■ Another teacher I know used it for her work on her masters degree. ■ We used it in our college readiness program to teach students the differences between lower level sources and academic sources. ■ Lastly, our STEM research class students used it to find sources!“ http://library.tamu.edu/oaksearch/ QR Code
  • 25. OFFICE OF SCHOLARLY COMMUNICATIONS Take Action
  • 26. OFFICE OF SCHOLARLY COMMUNICATIONS Online Identity & Scholarly Profile
  • 27. OFFICE OF SCHOLARLY COMMUNICATIONS Online Identity and Scholarly Profile Tell Your Story Build an Online Profile Know Your Impact
  • 28. OFFICE OF SCHOLARLY COMMUNICATIONS The research community has lacked the ability to link researchers and scholars with their professional activities. 28 Emerging Issue: Identity & Reputation Scholarly Identity on the Internet • Name ambiguity • Discoverability within and across databases • Author, grantee, and faculty record management • Output tracking • Research reporting and impact assessment
  • 29. OFFICE OF SCHOLARLY COMMUNICATIONS The research community has lacked the ability to link researchers and scholars with their professional activities. 29 Emerging Issue: Identity & Reputation Scholarly Identity on the Internet • Name ambiguity • Discoverability within and across databases • Author, grantee, and faculty record management • Output tracking • Research reporting and impact assessment
  • 30. OFFICE OF SCHOLARLY COMMUNICATIONS Emerging Issue: Identity & Reputation ORCIDs http://orcid.org/
  • 31. OFFICE OF SCHOLARLY COMMUNICATIONS “Nature journals authors can link their ORCID to their account in our manuscript submission and tracking system, and we[are now] publishing authors’ ORCIDs in papers.” ORCID iDs are being received by CrossRef and PubMed Diehl LA, Souza RM, Alves JB, Gordan PA, Esteves RZ, Jorge ML, Coelho IC. InsuOnline, a Serious Game to Teach Insulin Therapy to Primary Care Physicians: Design of the Game and a Randomized Controlled Trial for Educational Validation. JMIR Res Protoc. 2013 Jan 21;2(1):e5. doi: 10.2196/resprot.2431. PubMed PMID: 23612462, AUID- ORCID: 0000-0002-9958-7213 31 Emerging Issue: Identity & Reputation ORCIDs in the Publication Process
  • 32. OFFICE OF SCHOLARLY COMMUNICATIONS Import information from ORCID record Link grant application to ORCID identifier The U.S. National Institutes of Health (NIH) SciENcv includes ORCID iDs 32 Emerging Issue: Identity & Reputation ORCIDs in the Grant Application Process
  • 33. OFFICE OF SCHOLARLY COMMUNICATIONS Publish as Open Access
  • 34. OFFICE OF SCHOLARLY COMMUNICATIONS OAK Trust: TAMU’s Institutional Repository http://repository.tamu.edu/
  • 35. OFFICE OF SCHOLARLY COMMUNICATIONS OAK Fund: Funding Publication in OA Journals http://scholarlycommunication.library.tamu.edu/oak-fund/
  • 36. OFFICE OF SCHOLARLY COMMUNICATIONS National Science Foundation Broader Impacts Open Access Textbooks Project Source: www.goa.gov/products/GAO-13-368
  • 37. OFFICE OF SCHOLARLY COMMUNICATIONS National Science Foundation Broader Impacts Open Access Textbooks Project http://openstaxcollege.org/ ■ Review Existing Textbooks ■ Adopt an OA Textbook ■ NSF Broader Impacts ■ Write Chapter ■ Develop digital collection
  • 38. OFFICE OF SCHOLARLY COMMUNICATIONS Partner with the Library

Editor's Notes

  1. Data-intensive science consists of three basic activities: capture, curation, and analysis. Scientific communication, including peer review, is also undergoing fundamental changes.
  2. The model assumes that each lead author forms a core team through a Poisson process. Extended teams arise from core teams by adding new members in proportion to the productivity of the team. This process of cumulative advantage leads to the appearance of the power-law component of large teams at later times.
  3. The model assumes that each lead author forms a core team through a Poisson process. Extended teams arise from core teams by adding new members in proportion to the productivity of the team. This process of cumulative advantage leads to the appearance of the power-law component of large teams at later times.
  4. The model assumes that each lead author forms a core team through a Poisson process. Extended teams arise from core teams by adding new members in proportion to the productivity of the team. This process of cumulative advantage leads to the appearance of the power-law component of large teams at later times.
  5. One elementary school and one high school Small, rural school district that serves 583 students Student population is predominantely hispanic (57%) and economically disadvantaged (69%)
  6. Roscoe Collegiate Capstone STEM Research Center   WHAT: The Roscoe Collegiate Independent School District (RCISD) Board of Trustees (Board) has approved a bond election for the construction of a $3.5 million Capstone Science, Technology, Engineering, and Math (STEM) Research Center.   WHEN: Saturday, May 11, 2013 from 7 am to 7 pm (early voting April 29 –May 7)   WHERE: Roscoe Collegiate ISD Cafetorium, 1201 West 7th Street, Roscoe, Texas   HOW: No increase in the I&S Tax Rate! (Based upon conservative tax base and interest rate projections, RCISD can issue $3.5 million without increasing the debt service tax rate over its current level, because property values are significantly higher than estimated when the current debt service rate was approved by voters in November, 2008.)   WHY: Multiple Logic Points for a Capstone STEM Research Center   In 2009, RCISD became the first rural Early College High School (ECHS) in Texas, with the expectation for students to complete the Associate Degree through Western Texas College in Snyder upon graduation from high school.   Since 2009, RCISD has been working closely with the Texas Education Agency (TEA) and Educate Texas (formerly Texas High School Project) to create a sustainable model for early college that can be duplicated by other rural schools in Texas and the U.S.   In 2011, TEA began merging Early College and STEM programs. As a result, RCISD is now in the application process to become a STEM Academy, which requires Project Based Learning (PBL) to create the real world experiential relevance necessary to demand the rigor required for success in ECHS.   Emphasis upon prioritizing STEM Education is the result of Texas’ current inability to satisfy even 50% of the skilled workforce needs in the STEM related workforce.   In 2012, RCISD was named to the Texas High Performance Schools Consortium (THPSC), a 23 district consortium of Texas public school districts authorized by SB 1557 from the 82nd Legislature to transform public schools to better prepare students to meet the higher education and workforce demands of the 21st Century.   One charge of the THPSC is to develop a multiple measure accountability system that results in students earning certificates, certifications, and endorsements in STEM related fields, in addition to completing a Capstone Research Project that will serve as the culmination to Evidence Based Student Developed Portfolios that begin in grade 3.   Capstone Research requires a laboratory setting for experiential learning. Thus, the Research Center will be a High Tech Facility that includes: Environmental (solar, wind, water, petroleum), Engineering (robotics, etc.), Biotechnology (plant, animal), and Animal Science (nutrition, production, health) Laboratories, as well as multi-dimensional classrooms.   RCISD is in need of additional classroom and laboratory space to accommodate growth: (2007-2008 = 315 students), (2011-2012 = 361 students), (2012-2013 = 455 students ‘21% growth’), (2014-2015? = New housing development platted north of Roscoe).
  7. Bypasses the need for authentication Provides public access to a large collection of open access scholarly documents This search portal is drawing from a number of open access collections, including more than 6,500,000 resources from: BioMed Central arXiv DataCite Directory of Open Access Journals HathiTrust Project Gutenberg Public Library of Science (PLoS) Research Papers in Economics (RePEc) Institutional Repositories at Harvard, Iowa State, University of California system, and many others.
  8. Name ambiguity is a fundamental issue we need to address and solve. Ambiguity may be the result of a common name, by a person with several language variants of their name, or by variations in how name information is collected. But, even after addressing name ambiguity, to support discoverability, we need to connect information across databases, disciplines, organizations, and nations. A persistent name identifier addresses both challenges.
  9. Name ambiguity is a fundamental issue we need to address and solve. Ambiguity may be the result of a common name, by a person with several language variants of their name, or by variations in how name information is collected. But, even after addressing name ambiguity, to support discoverability, we need to connect information across databases, disciplines, organizations, and nations. A persistent name identifier addresses both challenges.
  10. Notes for presenter: Here are the three simple steps you should take to enjoy all of the benefits. The following slides provide additional detail and support. You can go to http://orcid.org to begin this process.
  11. Now have two publishers that have implemented end-to-end integration of ORCID identifiers, Hindawi and Nature. The first ORCID iDs were submitted with manusciupt metadata to CrossRef in March and to PubMed in April. We’ll see a demo od the Hindawi process today.
  12. NIH is piloting ORCID identifiers in its ScienCV system. The public, beta version will be released in late summer 2013.