Email:	
  info@scibite.com	
  
We Monitor Drug Discovery On The Internet, 24/7
Using The Latest Text-Analytics Tools
Science Professionals Use Our Data, Developers Use Our Software
Data
Intelligence
Text
Analysis
SciBite.com	
  
SciBite.com:	
  A	
  free	
  “Twi9er®”	
  like	
  
news	
  feed	
  for	
  pharma	
  &	
  biotech	
  
SciBite	
  Plus:	
  A	
  rich	
  therapeuCc	
  
intelligence	
  dashboard	
  for	
  scienCfic	
  &	
  
business	
  analysts	
  
SciBite	
  API:	
  Access	
  to	
  a	
  rich	
  data	
  feed	
  for	
  
data-­‐mining	
  in	
  target	
  discovery	
  and	
  drug	
  repurposing	
  
Termite:	
  A	
  highly-­‐tuned	
  text-­‐mining	
  
engine	
  for	
  pharma	
  and	
  biotechnology	
  
Termite-­‐Search:	
  Powerful	
  
detecCon	
  of	
  biomedical	
  topics	
  in	
  text	
  
Termite-­‐Ontologies:	
  Ontologies	
  
and	
  text-­‐mining	
  thesauri	
  for	
  life	
  science	
  
industry	
  
What is Therapeutic Intelligence?
I	
  care	
  about	
  asthma.	
  
	
  	
  
What	
  does	
  the	
  current	
  landscape	
  of	
  
(Drugs,	
  Targets,	
  Companies,	
  Trials,	
  
Collabora:ons…)	
  look	
  like?	
  
SciBite.com	
  
Well, a bit like this actually >>
Coloured	
  bars	
  tell	
  us	
  type	
  
of	
  arCcle	
  (news,	
  patent,	
  
paper…)	
  
SemanCc	
  tags	
  tell	
  us	
  
exactly	
  which	
  topics	
  
menConed,	
  regardless	
  of	
  
synonyms	
  
Spikes	
  when	
  
interesCng	
  stuff	
  
happening	
  
Never	
  miss	
  a	
  thing,	
  
email	
  or	
  RSS	
  updates	
  
Not	
  just	
  “things”,	
  context	
  too.	
  
Scibite.com: “.. like Twitter® for Pharma..”
Best of all, its completely free! SciBite.com	
  
But That’s Just The Tip Of The Iceberg
Our	
  database	
  contains	
  millions	
  of	
  
papers,	
  clinical	
  trials	
  summaries,	
  grants,	
  
patents,	
  news	
  arCcles,	
  blog	
  posts,	
  
Tweets,	
  press	
  releases,	
  FDA	
  noCces	
  and	
  
much	
  more…	
  
SciBite.com	
  
Interrogate Our Data,
Understand The Landscape >>
NewsScape	
  plot	
  shows	
  
topic-­‐topic	
  
relaConships	
  by	
  Cme	
  
and	
  frequency	
  
InteracCve	
  charts	
  
highlighCng	
  hot	
  
targets,	
  drugs,	
  
companies,	
  
indicaCons	
  
SciBite Plus: Understand & Exploit
The Drug Discovery Landscape
SciBite.com	
  
Commercial	
  Landscape	
  
map	
  shows	
  who’s	
  working	
  
on	
  your	
  target…	
  for	
  what.	
  
Target	
  relaConship	
  
matrix,	
  find	
  new	
  targets	
  
by	
  precedence	
  	
  
&	
  Much	
  More	
  Coming	
  Soon…..	
  
h9p://scibite.com/site/p3/prod/scibite_api.html	
  
	
  
SciBite API : A World Of Opportunity For Data Miners
SciBite.com	
  
Termite® The SciBite Text-Mining Engine
SciBite.com	
  
Termite Makes Text-Mining Easy
•  Simple architecture, runs on any Unix/Linux/OSX system
•  High throughput, easily scaled to process MB of text per second
•  “On-demand” and batch-mode processing
•  Combines thesauri and algorithms in a best-of-both platform
•  Professionally curated modules to identify gene, disease, side effect,
biochemical, companies, procedures, drugs, cells, and many more
Termite Is Uniquely Tuned For Biomedicine
•  There are many text-mining tools out there, but none of them provide
the range of capabilities offered by Termite
•  While other engines struggle with the ambiguity of everyday
biomedical text, Termite embraces it.
•  For example:
•  Termite knows when “GSK” means Glucose Synthase Kinase
and when it means GlaxoSmithKline
•  Termite knows when “Hedgehog” means the developmental
protein and not the animal
•  Termite knows that ERK1/2 means the proteins ERK1 and
ERK2
•  Termite knows there are at least five diseases known as “Pick
Disease” and can work out which exact one the text concerns
For	
  many	
  more	
  examples	
  where	
  other	
  engines	
  fail,	
  see	
  our	
  presentaCon:	
  
h9p://www.slideshare.net/scibitely/termite-­‐dealing-­‐with-­‐real-­‐world	
  
Try Termite Now!
Go	
  to	
  
h9p://scibite.com/site/p3/webconnect.html	
  
	
  
	
  
Then find an article
http://www.ncbi.nlm.nih.gov/pubmed/23144792
Install The Bookmarklet Watch Termite In Action
Internal	
  installa7on	
  for	
  private	
  documents	
  is	
  available	
   SciBite.com	
  
Augmenting Enterprise Search
Document	
  
Repositories	
  
Extracted	
  	
  
Files	
  
Termite	
  
Enhancement	
  
SemanCc	
  
“Tags”	
  
Your	
  search	
  tool	
  
here	
  
Generic Search Tools Just Don’t Cut It!
•  Standard Enterprise Search systems are
built to serve a wide audience. They can’t
deal with the nuances of biomedicine
•  Which means your users get annoyed when
they can’t find the right drug, target or
indication
•  Termite can be installed as part of your
indexing workflow, creating rich (and correct)
meta-data that allows users to search more
accurately
•  Documents can be extracted and tagged in
batch, or on-the-fly using the Termite-On-
Demand web service
SciBite.com	
  
..	
  And	
  Now…	
  
Cell	
  Line	
  
Species	
  
InvesCgaCve	
  Procedure	
  
Phenotype	
  
MedDRA	
  
Termite Ontologies & Thesauri
Custom	
  Ontologies	
  
Created	
  For	
  You	
  
	
  
Extensive	
  ontologies	
  and	
  
thesauri,	
  curated	
  by	
  
experts	
  with	
  decades	
  of	
  
drug-­‐discovery	
  
experience	
  
SciBite.com	
  
Contact Us At
info@scibite.com
To Discuss How We Can Help Your Organisation
Thanks For Reading!

Scibite - We Do.

  • 1.
  • 2.
    We Monitor DrugDiscovery On The Internet, 24/7 Using The Latest Text-Analytics Tools Science Professionals Use Our Data, Developers Use Our Software Data Intelligence Text Analysis SciBite.com   SciBite.com:  A  free  “Twi9er®”  like   news  feed  for  pharma  &  biotech   SciBite  Plus:  A  rich  therapeuCc   intelligence  dashboard  for  scienCfic  &   business  analysts   SciBite  API:  Access  to  a  rich  data  feed  for   data-­‐mining  in  target  discovery  and  drug  repurposing   Termite:  A  highly-­‐tuned  text-­‐mining   engine  for  pharma  and  biotechnology   Termite-­‐Search:  Powerful   detecCon  of  biomedical  topics  in  text   Termite-­‐Ontologies:  Ontologies   and  text-­‐mining  thesauri  for  life  science   industry  
  • 3.
    What is TherapeuticIntelligence? I  care  about  asthma.       What  does  the  current  landscape  of   (Drugs,  Targets,  Companies,  Trials,   Collabora:ons…)  look  like?   SciBite.com   Well, a bit like this actually >>
  • 4.
    Coloured  bars  tell  us  type   of  arCcle  (news,  patent,   paper…)   SemanCc  tags  tell  us   exactly  which  topics   menConed,  regardless  of   synonyms   Spikes  when   interesCng  stuff   happening   Never  miss  a  thing,   email  or  RSS  updates   Not  just  “things”,  context  too.   Scibite.com: “.. like Twitter® for Pharma..” Best of all, its completely free! SciBite.com  
  • 5.
    But That’s JustThe Tip Of The Iceberg Our  database  contains  millions  of   papers,  clinical  trials  summaries,  grants,   patents,  news  arCcles,  blog  posts,   Tweets,  press  releases,  FDA  noCces  and   much  more…   SciBite.com   Interrogate Our Data, Understand The Landscape >>
  • 6.
    NewsScape  plot  shows   topic-­‐topic   relaConships  by  Cme   and  frequency   InteracCve  charts   highlighCng  hot   targets,  drugs,   companies,   indicaCons   SciBite Plus: Understand & Exploit The Drug Discovery Landscape SciBite.com   Commercial  Landscape   map  shows  who’s  working   on  your  target…  for  what.   Target  relaConship   matrix,  find  new  targets   by  precedence     &  Much  More  Coming  Soon…..  
  • 7.
    h9p://scibite.com/site/p3/prod/scibite_api.html     SciBiteAPI : A World Of Opportunity For Data Miners SciBite.com  
  • 8.
    Termite® The SciBiteText-Mining Engine SciBite.com   Termite Makes Text-Mining Easy •  Simple architecture, runs on any Unix/Linux/OSX system •  High throughput, easily scaled to process MB of text per second •  “On-demand” and batch-mode processing •  Combines thesauri and algorithms in a best-of-both platform •  Professionally curated modules to identify gene, disease, side effect, biochemical, companies, procedures, drugs, cells, and many more Termite Is Uniquely Tuned For Biomedicine •  There are many text-mining tools out there, but none of them provide the range of capabilities offered by Termite •  While other engines struggle with the ambiguity of everyday biomedical text, Termite embraces it. •  For example: •  Termite knows when “GSK” means Glucose Synthase Kinase and when it means GlaxoSmithKline •  Termite knows when “Hedgehog” means the developmental protein and not the animal •  Termite knows that ERK1/2 means the proteins ERK1 and ERK2 •  Termite knows there are at least five diseases known as “Pick Disease” and can work out which exact one the text concerns For  many  more  examples  where  other  engines  fail,  see  our  presentaCon:   h9p://www.slideshare.net/scibitely/termite-­‐dealing-­‐with-­‐real-­‐world  
  • 9.
    Try Termite Now! Go  to   h9p://scibite.com/site/p3/webconnect.html       Then find an article http://www.ncbi.nlm.nih.gov/pubmed/23144792 Install The Bookmarklet Watch Termite In Action Internal  installa7on  for  private  documents  is  available   SciBite.com  
  • 10.
    Augmenting Enterprise Search Document   Repositories   Extracted     Files   Termite   Enhancement   SemanCc   “Tags”   Your  search  tool   here   Generic Search Tools Just Don’t Cut It! •  Standard Enterprise Search systems are built to serve a wide audience. They can’t deal with the nuances of biomedicine •  Which means your users get annoyed when they can’t find the right drug, target or indication •  Termite can be installed as part of your indexing workflow, creating rich (and correct) meta-data that allows users to search more accurately •  Documents can be extracted and tagged in batch, or on-the-fly using the Termite-On- Demand web service SciBite.com  
  • 11.
    ..  And  Now…   Cell  Line   Species   InvesCgaCve  Procedure   Phenotype   MedDRA   Termite Ontologies & Thesauri Custom  Ontologies   Created  For  You     Extensive  ontologies  and   thesauri,  curated  by   experts  with  decades  of   drug-­‐discovery   experience   SciBite.com  
  • 12.
    Contact Us At info@scibite.com ToDiscuss How We Can Help Your Organisation Thanks For Reading!