- Populous is a tool that allows domain experts without OWL expertise to annotate data in spreadsheets according to ontologies and automatically generates corresponding OWL axioms.
- It uses a familiar spreadsheet interface for data entry and validation according to ontologies. The OPPL scripting language can then automatically generate complex OWL modeling patterns from the spreadsheet data.
- Demos showed Populous in use for annotating biological data from spreadsheets according to an anatomy ontology and generating the corresponding OWL axioms using OPPL scripts. This allows engaging domain experts in ontology population and knowledge base development.
Towards ubiquitous OWL computing: Simplifying programmatic authoring of and q...Hilmar Lapp
Presentation about two small tools addressing gaps commonly encountered when computing and programming with OWL (the Web Ontology Language) at scale. Given at the 2014 Bioinformatics Open Source Conference (BOSC).
The video of the talk is here: http://youtu.be/K0SlYwMyn-A
Investigating Term Reuse and Overlap in Biomedical OntologiesMaulik Kamdar
Our conference presentation at the 6th International Conference on Biomedical Ontology (ICBO), held at Lisbon, Portugal, during 27th-30th July 2015. Conference Proceedings: http://icbo2015.fc.ul.pt/ICBO2015Proceedings.pdf
Transparencias de las clases sobre Linked Data en el Máster de Bioinformática de la Universidad de Murcia. Para un mejor efecto, http://biordf.org:8080/UM_LSLD/Clases/UM_Bioinformatics_LD.html
Biomedical ontologies are key to the success of Semantic Web technologies in Life Sciences; therefore, it is important to provide appropriate tools for their development and further exploitation. The Ontology Pre Processor Language (OPPL) can be used for automating the complex manipulation needed to devise biomedical ontologies with richer axiomatic content, which in turn pave the way towards advanced biological data analyses. We present OPPL-Galaxy, an OPPL wrapper for the Galaxy platform, and a series of examples demonstrating its functionality for enriching ontologies. As Galaxy provides an integrated framework to make use of various bioinformatics tools, the functionality delivered by OPPL to manipulate ontologies can be combined along with the tools and workflows devised in Galaxy. As a result, those workflows can be used to perform more thorough analyses of biological information by exploiting extant biological knowledge codified in (enriched) biomedical ontologies
Towards ubiquitous OWL computing: Simplifying programmatic authoring of and q...Hilmar Lapp
Presentation about two small tools addressing gaps commonly encountered when computing and programming with OWL (the Web Ontology Language) at scale. Given at the 2014 Bioinformatics Open Source Conference (BOSC).
The video of the talk is here: http://youtu.be/K0SlYwMyn-A
Investigating Term Reuse and Overlap in Biomedical OntologiesMaulik Kamdar
Our conference presentation at the 6th International Conference on Biomedical Ontology (ICBO), held at Lisbon, Portugal, during 27th-30th July 2015. Conference Proceedings: http://icbo2015.fc.ul.pt/ICBO2015Proceedings.pdf
Transparencias de las clases sobre Linked Data en el Máster de Bioinformática de la Universidad de Murcia. Para un mejor efecto, http://biordf.org:8080/UM_LSLD/Clases/UM_Bioinformatics_LD.html
Biomedical ontologies are key to the success of Semantic Web technologies in Life Sciences; therefore, it is important to provide appropriate tools for their development and further exploitation. The Ontology Pre Processor Language (OPPL) can be used for automating the complex manipulation needed to devise biomedical ontologies with richer axiomatic content, which in turn pave the way towards advanced biological data analyses. We present OPPL-Galaxy, an OPPL wrapper for the Galaxy platform, and a series of examples demonstrating its functionality for enriching ontologies. As Galaxy provides an integrated framework to make use of various bioinformatics tools, the functionality delivered by OPPL to manipulate ontologies can be combined along with the tools and workflows devised in Galaxy. As a result, those workflows can be used to perform more thorough analyses of biological information by exploiting extant biological knowledge codified in (enriched) biomedical ontologies
Publicar datos de manera inteligente en la Web: la filosofía y la práctica de los datos enlazados (Linked Data)
Reuniónde de la red de Observatorios de Sostenibilidad
Synthetic Fiber Construction in lab .pptxPavel ( NSTU)
Synthetic fiber production is a fascinating and complex field that blends chemistry, engineering, and environmental science. By understanding these aspects, students can gain a comprehensive view of synthetic fiber production, its impact on society and the environment, and the potential for future innovations. Synthetic fibers play a crucial role in modern society, impacting various aspects of daily life, industry, and the environment. ynthetic fibers are integral to modern life, offering a range of benefits from cost-effectiveness and versatility to innovative applications and performance characteristics. While they pose environmental challenges, ongoing research and development aim to create more sustainable and eco-friendly alternatives. Understanding the importance of synthetic fibers helps in appreciating their role in the economy, industry, and daily life, while also emphasizing the need for sustainable practices and innovation.
June 3, 2024 Anti-Semitism Letter Sent to MIT President Kornbluth and MIT Cor...Levi Shapiro
Letter from the Congress of the United States regarding Anti-Semitism sent June 3rd to MIT President Sally Kornbluth, MIT Corp Chair, Mark Gorenberg
Dear Dr. Kornbluth and Mr. Gorenberg,
The US House of Representatives is deeply concerned by ongoing and pervasive acts of antisemitic
harassment and intimidation at the Massachusetts Institute of Technology (MIT). Failing to act decisively to ensure a safe learning environment for all students would be a grave dereliction of your responsibilities as President of MIT and Chair of the MIT Corporation.
This Congress will not stand idly by and allow an environment hostile to Jewish students to persist. The House believes that your institution is in violation of Title VI of the Civil Rights Act, and the inability or
unwillingness to rectify this violation through action requires accountability.
Postsecondary education is a unique opportunity for students to learn and have their ideas and beliefs challenged. However, universities receiving hundreds of millions of federal funds annually have denied
students that opportunity and have been hijacked to become venues for the promotion of terrorism, antisemitic harassment and intimidation, unlawful encampments, and in some cases, assaults and riots.
The House of Representatives will not countenance the use of federal funds to indoctrinate students into hateful, antisemitic, anti-American supporters of terrorism. Investigations into campus antisemitism by the Committee on Education and the Workforce and the Committee on Ways and Means have been expanded into a Congress-wide probe across all relevant jurisdictions to address this national crisis. The undersigned Committees will conduct oversight into the use of federal funds at MIT and its learning environment under authorities granted to each Committee.
• The Committee on Education and the Workforce has been investigating your institution since December 7, 2023. The Committee has broad jurisdiction over postsecondary education, including its compliance with Title VI of the Civil Rights Act, campus safety concerns over disruptions to the learning environment, and the awarding of federal student aid under the Higher Education Act.
• The Committee on Oversight and Accountability is investigating the sources of funding and other support flowing to groups espousing pro-Hamas propaganda and engaged in antisemitic harassment and intimidation of students. The Committee on Oversight and Accountability is the principal oversight committee of the US House of Representatives and has broad authority to investigate “any matter” at “any time” under House Rule X.
• The Committee on Ways and Means has been investigating several universities since November 15, 2023, when the Committee held a hearing entitled From Ivory Towers to Dark Corners: Investigating the Nexus Between Antisemitism, Tax-Exempt Universities, and Terror Financing. The Committee followed the hearing with letters to those institutions on January 10, 202
Model Attribute Check Company Auto PropertyCeline George
In Odoo, the multi-company feature allows you to manage multiple companies within a single Odoo database instance. Each company can have its own configurations while still sharing common resources such as products, customers, and suppliers.
Embracing GenAI - A Strategic ImperativePeter Windle
Artificial Intelligence (AI) technologies such as Generative AI, Image Generators and Large Language Models have had a dramatic impact on teaching, learning and assessment over the past 18 months. The most immediate threat AI posed was to Academic Integrity with Higher Education Institutes (HEIs) focusing their efforts on combating the use of GenAI in assessment. Guidelines were developed for staff and students, policies put in place too. Innovative educators have forged paths in the use of Generative AI for teaching, learning and assessments leading to pockets of transformation springing up across HEIs, often with little or no top-down guidance, support or direction.
This Gasta posits a strategic approach to integrating AI into HEIs to prepare staff, students and the curriculum for an evolving world and workplace. We will highlight the advantages of working with these technologies beyond the realm of teaching, learning and assessment by considering prompt engineering skills, industry impact, curriculum changes, and the need for staff upskilling. In contrast, not engaging strategically with Generative AI poses risks, including falling behind peers, missed opportunities and failing to ensure our graduates remain employable. The rapid evolution of AI technologies necessitates a proactive and strategic approach if we are to remain relevant.
The Roman Empire A Historical Colossus.pdfkaushalkr1407
The Roman Empire, a vast and enduring power, stands as one of history's most remarkable civilizations, leaving an indelible imprint on the world. It emerged from the Roman Republic, transitioning into an imperial powerhouse under the leadership of Augustus Caesar in 27 BCE. This transformation marked the beginning of an era defined by unprecedented territorial expansion, architectural marvels, and profound cultural influence.
The empire's roots lie in the city of Rome, founded, according to legend, by Romulus in 753 BCE. Over centuries, Rome evolved from a small settlement to a formidable republic, characterized by a complex political system with elected officials and checks on power. However, internal strife, class conflicts, and military ambitions paved the way for the end of the Republic. Julius Caesar’s dictatorship and subsequent assassination in 44 BCE created a power vacuum, leading to a civil war. Octavian, later Augustus, emerged victorious, heralding the Roman Empire’s birth.
Under Augustus, the empire experienced the Pax Romana, a 200-year period of relative peace and stability. Augustus reformed the military, established efficient administrative systems, and initiated grand construction projects. The empire's borders expanded, encompassing territories from Britain to Egypt and from Spain to the Euphrates. Roman legions, renowned for their discipline and engineering prowess, secured and maintained these vast territories, building roads, fortifications, and cities that facilitated control and integration.
The Roman Empire’s society was hierarchical, with a rigid class system. At the top were the patricians, wealthy elites who held significant political power. Below them were the plebeians, free citizens with limited political influence, and the vast numbers of slaves who formed the backbone of the economy. The family unit was central, governed by the paterfamilias, the male head who held absolute authority.
Culturally, the Romans were eclectic, absorbing and adapting elements from the civilizations they encountered, particularly the Greeks. Roman art, literature, and philosophy reflected this synthesis, creating a rich cultural tapestry. Latin, the Roman language, became the lingua franca of the Western world, influencing numerous modern languages.
Roman architecture and engineering achievements were monumental. They perfected the arch, vault, and dome, constructing enduring structures like the Colosseum, Pantheon, and aqueducts. These engineering marvels not only showcased Roman ingenuity but also served practical purposes, from public entertainment to water supply.
Introduction to AI for Nonprofits with Tapp NetworkTechSoup
Dive into the world of AI! Experts Jon Hill and Tareq Monaur will guide you through AI's role in enhancing nonprofit websites and basic marketing strategies, making it easy to understand and apply.
Unit 8 - Information and Communication Technology (Paper I).pdfThiyagu K
This slides describes the basic concepts of ICT, basics of Email, Emerging Technology and Digital Initiatives in Education. This presentations aligns with the UGC Paper I syllabus.
Unit 8 - Information and Communication Technology (Paper I).pdf
Populous swat4ls slides_slideshare
1. Spreadsheets to OWL with Populous 8/12/2011 Mikel Egaña Aranguren 3205 School of Computer Science Universidad Politécnica de Madrid (UPM) 28660 Boadilla del Monte Spain Ontology Engineering Group (OEG) http://www.oeg-upm.net [email_address] http://mikeleganaaranguren.com Simon Jupp Functional Genomic Group European Bioinfomatics Institute Wellcome Trust Genome Campus Hinxton UK [email_address] Robert Stevens Biohealth Informatics Group School of Computer Science University of Manchester Manchester UK [email_address]
2. Motivation Engaging life scientists in data annotation and ontology population Protégé and OWL are scary.. Need for simple “ form filling ” style of knowledge gathering and describing data - so we use spreadsheets. Q1 How do we get people to annotate data in spreadhseets accoridng to ontologies? Q2 How do we transform those spreadsheets into sets of axioms? Populous
3. Writing ontologies in OWL is hard Especially if one doesn ’ t know OWL; Hard to do complex patterns of axioms; Hard to be consistent and conform to a style; Hard to re-factor an ontology ’ s content Doing all this in bulk is tedious and error prone Populous
4. Separation of concerns Populous All Eukaryotic Cells are either nucleated or anucleate, some cells are multinucleate Knowledge ‘ Eukaryotic Cells’ has_nucleation some ‘Nucleation’ ‘ Nucleation’ subClassOf {mononucleate , binucleate , polynucleate , anucleate} Ontologically ‘ Eukaryotic Cells’ has_nucleation some ‘Nucleation’ ‘ Nucleation’ subClassOf {mononucleate , binucleate , polynucleate , anucleate} Differentia ‘ Eukaryotic Cells’ ‘Nucleation’ Mononuclear phagocyte mononucleate Flight Muscle cell multinucleate Red Blood cell anucleate Real Examples
5. Ontology patterns Axioms often added in regular ways There are often patterns of axioms for a particular way of representation There are also design patterns – standard well recognised solutions Analogous to software patterns Doing the same thing in the same way… it ’ s a good thing Populous ‘ Protein’ has_molecular_function some ‘Molecular Function’ is_capable_of some ‘Biological Process’ located_in some ‘Cellualr component’ Repetative pattern
6. Some requirements Want consistent axiom generation Want to write axioms according to patterns Separate knowledge gathering from axiom generation Engage domain experts not experts in OWL and/or ontologies Validate content to go into the ontology Do all of this in a familiar environment i.e. spreadsheets Populous
7. Using spreadsheets Spreadsheets are often used simply to organise data Basic tabulation Saying the same kinds of things repeatedly A very familiar environment Want to capitalise on this… Populous
16. OWL generation Populous Class: CL:0003523 Annotation: rdfs:label ‘Kidney Cell’ EquivalentTo: CL:0000000 and OBO_REL:part_of some MAO_000629 Manchester OWL syntax
17. Introduction to OPPL Ontology Pre Processor Language (oppl.sf.net) Scripting language to automate the manipulation of OWL ontologies Apply pre-defined very complex OWL modelling automatically Based in Manchester OWL Syntax Populous
18. OPPL script anatomy OPPL for Populous OPPL script Variable declaration, Variable declaration, ... SELECT Query, Query, ... WHERE Constraint, Constraint, ... BEGIN ADD/REMOVE Axiom, ADD/REMOVE Axiom, ... END;
27. OPPL for Populous More information OPPL publications: http://oppl2.sourceforge.net/documentation.html OPPL documentation: http://oppl2.sourceforge.net/oppl_documentation.html OPPL patterns: http://oppl2.sourceforge.net/patterns_documentation.html OPPL Manual: http://oppl2.sourceforge.net/manual.pdf OPPL sample scripts: http://oppl2.sourceforge.net/taggedexamples/
28. Populous Demo 2 Demo 2 -converting spreadsheets to OWL using OPPL
29. Populous Populous and RightField Ontological annotation by stealth Real biological data + high quality meta-data Development of a Kidney and Urinary Pathway Knowledge Base
30. Populous Demo 3 Demo 3 - Experiment template for data annotation
31.
Editor's Notes
This slide shows a piece of knowledge in free text about cells, then we show how this could be represented ontologically. Then we highlight the differentia in the pattern. Finally show some real examples of values that could fit the pattern
Screenshot of drop down validation list from excel