OpenAIRE initiatives and events during the #OAWeek2014. Special newsletter issue, New animation clip, Webinars slides and recordings, Services and Resources of the day.
OpenAIRE compatibility for repositories - Webinar on the OpenAIRE GuidelinesPedro Príncipe
Webinar on the OpenAIRE Guidelines - OpenAIRE compatibility for repositories, by Pedro Príncipe and José Carvalho. 18 March 2014 (11:00 – 12:00 CET (DSpace repository platform))
Enabling better science - Results and vision of the OpenAIRE infrastructure a...Paolo Manghi
Enabling better science: presentation on the results and vision of the OpenAIRE infrastructure and RDA Publishing Data Services Working Group in this direction.
OpenAIRE initiatives and events during the #OAWeek2014. Special newsletter issue, New animation clip, Webinars slides and recordings, Services and Resources of the day.
OpenAIRE compatibility for repositories - Webinar on the OpenAIRE GuidelinesPedro Príncipe
Webinar on the OpenAIRE Guidelines - OpenAIRE compatibility for repositories, by Pedro Príncipe and José Carvalho. 18 March 2014 (11:00 – 12:00 CET (DSpace repository platform))
Enabling better science - Results and vision of the OpenAIRE infrastructure a...Paolo Manghi
Enabling better science: presentation on the results and vision of the OpenAIRE infrastructure and RDA Publishing Data Services Working Group in this direction.
OpenAIRE "How to make your repository OpenAIRE compliant: EPrints"OpenAIRE
Want to support and monitor the implementation of the FP7 Open Access pilot? Want to help your faculty members comply with the Open Access requirements of the European Commission (EC)? Interested in learning more about making your repository compliant with the OpenAIRE infrastructure? Want to add EC project data to your repository records and use OpenAIRE value-added functionality (post authoring tools, monitoring tools through analysis of document and usage statistics)? See the slides from our online workshop! In order to harvest and connect publications to related EC FP7 grant agreement and calculate the percentage of Open Access versus non-Open Access publications, the OpenAIRE project requires repositories to adapt to the OpenAIRE Guidelines. These are low-barrier requirements for OAI-PMH compliant repositories that build on the oai_dc and DRIVER Guidelines. When your repository is OpenAIRE compliant, its FP7 funded content is harvested periodically, indexed within the OpenAIRE portal and presented in the OpenAIRE search and browse section. In this way, FP7 funded research results deposited in your repository can achieve wider visibility and distribution – and be read, used and cited more widely by the global research community. Research managers in your institution will be able to compare your institutional performance in FP7 projects with the performance of other institutions in your country and within the European Union using the OpenAIRE FP7 publication statistics tool. You will also save time for researchers at your institution. Repositories, successfully harvested by the OpenAIRE, are entitled to display the OpenAIRE logo on their website, to certify quality and the global networked status of their content. The OpenAIRE project team can help you with your targeted advocacy activities to ensure that high quality content is deposited into your repository and then harvested by the OpenAIRE portal. We reach out to the researchers publishing FP7 funded articles and encourage them to self-archive in your repository.
Making your Repository or Open Access Journal OpenAIRE compatible with OA Hor...OpenAIRE
Webinar: "Making your OA repository or OA journal OpenAIRE compatible with OA Horizon 2020 requirements" - Thursday 26 November 2015, 11:00am - 12:00pm.
The webinar is a part of FOSTER e-learning course “Making your OA repository or OA journal OpenAIRE compatible with OA Horizon 2020 requirements”.
OSDC 2011 | Open Source Software for Public Administration by Dr. George Kolo...NETWAYS
This presentation aims to explore OSOR.eu, the online communication platform of the Open Source Observatory and Repository. OSOR.eu is an initiative of the European Commission with the scope to promote, exchange experience and share information on the use of open source software by Public Administrations. More particularly, OSOR.eu provides helpful information for open source software developers who work on software that may be used to address the needs of public administrations.
The presentation will begin with an outline of what the platform provides in terms of information, databases, networking, and who and why can benefit from its use. Public administrations and software developers can stay updated on current relevant activities and can use the platform to facilitate communication of needs, requirements, and evolution.Following the general introduction on how the public sector and the open source community can benefit from OSOR.eu, the speaker will then move into explaining more technical details on how the platform works in relation to the specific areas of interest for the audience and will discuss how to choose the appropriate open source license when starting from scratch or when reusing other OSS components. Furthermore, an outline will be given on the benefits of the European Public License in an environment of different languages and legal systems, such as Europe.
Las redes sociales cara a cara
XII Jornadas sobre Infancia y Juventud, Unidad de Prevención Comunitaria en Conductas Adictivas (UPCCA)
Villena, 23 de octubre de 2015
Mesa redonda moderada por Gersón Beltrán (@gersonbeltran) con la participación de Clara Montesinos (@claramontesinos), Susana Lluna (@susanalluna), Mayte Vañó (@maytevs) y Eva María Marcos (@evamariamarcos)
http://jornadaprevencionvillena.blogspot.com.es/
OpenAIRE "How to make your repository OpenAIRE compliant: EPrints"OpenAIRE
Want to support and monitor the implementation of the FP7 Open Access pilot? Want to help your faculty members comply with the Open Access requirements of the European Commission (EC)? Interested in learning more about making your repository compliant with the OpenAIRE infrastructure? Want to add EC project data to your repository records and use OpenAIRE value-added functionality (post authoring tools, monitoring tools through analysis of document and usage statistics)? See the slides from our online workshop! In order to harvest and connect publications to related EC FP7 grant agreement and calculate the percentage of Open Access versus non-Open Access publications, the OpenAIRE project requires repositories to adapt to the OpenAIRE Guidelines. These are low-barrier requirements for OAI-PMH compliant repositories that build on the oai_dc and DRIVER Guidelines. When your repository is OpenAIRE compliant, its FP7 funded content is harvested periodically, indexed within the OpenAIRE portal and presented in the OpenAIRE search and browse section. In this way, FP7 funded research results deposited in your repository can achieve wider visibility and distribution – and be read, used and cited more widely by the global research community. Research managers in your institution will be able to compare your institutional performance in FP7 projects with the performance of other institutions in your country and within the European Union using the OpenAIRE FP7 publication statistics tool. You will also save time for researchers at your institution. Repositories, successfully harvested by the OpenAIRE, are entitled to display the OpenAIRE logo on their website, to certify quality and the global networked status of their content. The OpenAIRE project team can help you with your targeted advocacy activities to ensure that high quality content is deposited into your repository and then harvested by the OpenAIRE portal. We reach out to the researchers publishing FP7 funded articles and encourage them to self-archive in your repository.
Making your Repository or Open Access Journal OpenAIRE compatible with OA Hor...OpenAIRE
Webinar: "Making your OA repository or OA journal OpenAIRE compatible with OA Horizon 2020 requirements" - Thursday 26 November 2015, 11:00am - 12:00pm.
The webinar is a part of FOSTER e-learning course “Making your OA repository or OA journal OpenAIRE compatible with OA Horizon 2020 requirements”.
OSDC 2011 | Open Source Software for Public Administration by Dr. George Kolo...NETWAYS
This presentation aims to explore OSOR.eu, the online communication platform of the Open Source Observatory and Repository. OSOR.eu is an initiative of the European Commission with the scope to promote, exchange experience and share information on the use of open source software by Public Administrations. More particularly, OSOR.eu provides helpful information for open source software developers who work on software that may be used to address the needs of public administrations.
The presentation will begin with an outline of what the platform provides in terms of information, databases, networking, and who and why can benefit from its use. Public administrations and software developers can stay updated on current relevant activities and can use the platform to facilitate communication of needs, requirements, and evolution.Following the general introduction on how the public sector and the open source community can benefit from OSOR.eu, the speaker will then move into explaining more technical details on how the platform works in relation to the specific areas of interest for the audience and will discuss how to choose the appropriate open source license when starting from scratch or when reusing other OSS components. Furthermore, an outline will be given on the benefits of the European Public License in an environment of different languages and legal systems, such as Europe.
Las redes sociales cara a cara
XII Jornadas sobre Infancia y Juventud, Unidad de Prevención Comunitaria en Conductas Adictivas (UPCCA)
Villena, 23 de octubre de 2015
Mesa redonda moderada por Gersón Beltrán (@gersonbeltran) con la participación de Clara Montesinos (@claramontesinos), Susana Lluna (@susanalluna), Mayte Vañó (@maytevs) y Eva María Marcos (@evamariamarcos)
http://jornadaprevencionvillena.blogspot.com.es/
Feed me, Seymour! Supplemental User Data For IBM Connections ProfilesMartin Leyrer
Presentation given at ICONUK 2016-09-15 in London
If you have tried to map a long office name and adress into the officeName of the PEOPLEDB, you probably stumbled upon the chapter "Supplemental user data for Profiles" in the IBM Connections documentation. What is described as "supplemental tables within the Profiles database" are in fact rather essential tables that can help you with adoption by providing more data within a users profile. Also, their use cuts down on the number of customizations needed as well as providing more information to the Cognos reports.
I will talk you through the countries, departments, organization, enmployee and worklocation tables, how the can be filled with data either through csv files as well as custom assembly lines and how to reference them efficiently. Also we will take a look on what is necessary to expose the additional data in search, business cards and the profile pages.
After this session you should be able to easily and quickly add more data to your IBM Connections profiles.
Buzzword Bingo for this session: fill-scripts, profiles, tdi, csv workplace, address, department, reports, cognos, search.
OpenAIRE services and tools - presentation at #DI4R2016OpenAIRE
Presentation at Digital Infrastrctures for Research Conference 2016 (Sept. 30). Title: Open Access and Open Data in Horizon 2020: for Research managers and Project Coordinators, by Pedro Príncipe (University of Minho)
How to practically support Open Access: Guidelines for Data Providers of the ...OpenAIRE
Webinar@AIMS: Guidelines for Data Providers of the OpenAIRE scholarly communication infrastructure (3 Dec. 2015) - by Jochen Schirrwagen (Univ. Bielefeld / OpenAIRE)
This webinar will provide an overview of the OpenAIRE Guidelines for data source managers who operate literature repositories, data archives or current research information systems.
The general principle of these guidelines is to improve interoperability of bibliographic information exchange between repositories, e-journals, CRIS and research infrastructures. In particular they are a means to help content providers to comply with Open Access policies and enable reporting of research output from public funding, e.g. the European Commission Open Access mandate in Horizon2020. An important aspect of the continuous development of these guidelines includes the use of established authority files and controlled vocabularies.
OpenAIRE Content Providers Community Call, July 1st, 2020
This call was focused on Data Repositories namely the OpenAIRE Research Graph and Data Repositories, the OpenAIRE Content Acquisition Policy, and the Guidelines for Data Archive Managers.
Was also an opportunity to share the most recent updates and novelties in the OpenAIRE Content Provider Dashboard, and to get feedback from community.
Follow the Community activities at https://www.openaire.eu/provide-community-calls
Conference Opening Science to Meet Future Challenges, Warsaw, March 11, 2014, organized by Interdisciplinary Centre for Mathematical and Computational Modelling, University of Warsaw.
OpenAIRE guidelines and broker service for repository managers - OpenAIRE #OA...OpenAIRE
Presentation by Pedro Principe and Paolo Manghi at the OpenAIRE Open Access week webinar. Friday October 28, 2016. Webinar on Openaire compatibility guidelines and the dashboard for Repository Managers, with Pedro Principe (University of Minho) and Paolo Manghi (CNR/ISTI).
OpenAIRE "How to make your repository OpenAIRE compliant: proprietary platforms"OpenAIRE
Want to support and monitor the implementation of the FP7 Open Access pilot? Want to help your faculty members comply with the Open Access requirements of the European Commission (EC)? Interested in learning more about making your repository compliant with the OpenAIRE infrastructure? Want to add EC project data to your repository records and use OpenAIRE value-added functionality (post authoring tools, monitoring tools through analysis of document and usage statistics)? See the slides from our online workshop! In order to harvest and connect publications to related EC FP7 grant agreement and calculate the percentage of Open Access versus non-Open Access publications, the OpenAIRE project requires repositories to adapt to the OpenAIRE Guidelines. These are low-barrier requirements for OAI-PMH compliant repositories that build on the oai_dc and DRIVER Guidelines. When your repository is OpenAIRE compliant, its FP7 funded content is harvested periodically, indexed within the OpenAIRE portal and presented in the OpenAIRE search and browse section. In this way, FP7 funded research results deposited in your repository can achieve wider visibility and distribution – and be read, used and cited more widely by the global research community. Research managers in your institution will be able to compare your institutional performance in FP7 projects with the performance of other institutions in your country and within the European Union using the OpenAIRE FP7 publication statistics tool. You will also save time for researchers at your institution. Repositories, successfully harvested by the OpenAIRE, are entitled to display the OpenAIRE logo on their website, to certify quality and the global networked status of their content. The OpenAIRE project team can help you with your targeted advocacy activities to ensure that high quality content is deposited into your repository and then harvested by the OpenAIRE portal. We reach out to the researchers publishing FP7 funded articles and encourage them to self-archive in your repository.
OpenAIRE "How to make your repository OpenAIRE compliant: DSpace" OpenAIRE
Presentation on the Online workshop – January 23 and 24, 2012 - "How to make your repository OpenAIRE compliant" - Pedro Príncipe & José Carvalho , University of Minho
AGENDA
1) OpenAIRE and compliancy with the ERC Scientific
Council Guidelines for Open Access and the
European Commission Open Access Pilot in FP7,
Pedro Príncipe
2) How to make your repository OpenAIRE
compliant, Pedro Príncipe & José Carvalho
3) Compliancy for DSpace, José Carvalho
4) Questions and Answers.
Repository Power: How Repositories can support Open Access Mandates (OR2015 O...OpenAIRE
OpenAIRE presentation at the Open Repositories Conference (OR2015), in Indianapolis, 10/Jun/2015 - Session - P4B: Supporting Open Scholarship and Open Science. Presented by Wolfram Horstmann (Univ. Goettingen) on behalf of the paper authors: Najla Rettberg, Jochen Schirrwagen, Pedro Principe, Eloy Rodrigues, José Carvalho, Paolo Manghi, Natalia Manola.
Presentation on OpenAIRE infrastruture, EC Open Access Mandate, Zenodo repository, and Open Access developments in South Region Countries; by Pedro Príncipe - University of Minho (OpenAIRE Region South Coordinator.
Similar to OpenAIRE compatibility for DSpace repositories - OR 2014 workshop (20)
OpenAIRE Content Providers Community Call, November 4th, 2020
This call was focused on the PROVIDE future developments, functionalities wishlist and PROVIDE service in EOSC.
Was also an opportunity to share the most recent updates and novelties in the OpenAIRE Content Provider Dashboard, and to get feedback from community.
Recordings: https://youtu.be/wY4fOS767Us
Follow the Community activities at https://www.openaire.eu/provide-community-calls
OpenAIRE in the European Open Science Cloud (EOSC)OpenAIRE
Openness is the success factor for EOSC. OpenAIRE has been working in delivering an open access scholarly communication in Europe for the past 10 years and we now present how our work fits into the EOSC core developments
OpenAIRE Content Providers Community Call, October 7th, 2020
This call was focused on the OpenAIRE Broker Service, specifying how the service works to deploy the enrichment events to the Content Providers managers.
Was also an opportunity to share the most recent updates and novelties in the OpenAIRE Content Provider Dashboard, and to get feedback from community.
Recording: https://youtu.be/3sF4B58EGcs
Follow the Community activities at https://www.openaire.eu/provide-community-calls
OpenAIRE Content Providers Community Call. May 6th, 2020.
This Call focused the presentation of the new User Interface of Provide Dashboard and the presentation of 4 use cases using the Provide service.
Was also an opportunity to share the most recent updates and novelties in the OpenAIRE Content Provider Dashboard, and to get feedback from community.
Recording available here: https://youtu.be/J4m_ryRxtnY
20200504_OpenAIRE Legal Policy Webinar: GDPR and Sharing DataOpenAIRE
Presentation by Jacques Flores Dourojeanni (Research Data Management Consultant Utrecht University Library), as delivered during the OpenAIRE Legal Policy Webinar series on May 4th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
20200504_Research Data & the GDPR: How Open is Open?OpenAIRE
Presentation by Prodromos Tsiavos (Senior Legal Advisor - ARC/ Director - Onassis Group) as delivered during the OpenAIRE Legal Policy Webinar series on May 4th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
20200504_Data, Data Ownership and Open ScienceOpenAIRE
Presentation by Thomas Margoni (Senior Lecturer in Intellectual Property and Internet Law, Co-director, CREATe, University of Glasgow) as delivered during the OpenAIRE Legal Policy Webinar series on May 4th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
20200429_Research Data & the GDPR: How Open is Open? (updated version)OpenAIRE
Presentation by Prodromos Tsiavos (Senior Legal Advisor - ARC/ Director - Onassis Group) as delivered during the OpenAIRE Legal Policy Webinar series on April 29th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
20200429_Data, Data Ownership and Open ScienceOpenAIRE
Presentation by Thomas Margoni (Senior Lecturer in Intellectual Property and Internet Law, Co-director, CREATe, University of Glasgow) as delivered during the OpenAIRE Legal Policy Webinar series on April 29th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
20200429_OpenAIRE Legal Policy Webinar: GDPR and Sharing DataOpenAIRE
Presentation by Jacques Flores Dourojeanni (Research Data Management Consultant Utrecht University Library), as delivered during the OpenAIRE Legal Policy Webinar series on April 29th 2020.
More information and recordings: https://www.openaire.eu/item/openaire-legal-policy-webinars
COVID-19: Activities, tools, best practice and contact points in GreeceOpenAIRE
Presentation from the webinar organized by the Greek OpenAIRE and RDA Nodes (Athena RC) and Elixir-GR to inform participants of EU and national efforts, in collaboration with the following research organizations: Flemming, CERTH, HEAL-Link, Demokritos, Univ. of Athens (Medical School).
Presentation of the 2nd Content Providers Community Call, targeting the following topics: 1) OpenAIRE Content provider dashboard updates; Main topic: DSpace-CRIS for OpenAIRE: implementation of the CRIS guidelines and beyond; 3) Community questions & comments.
Presentation of the 2nd Content Providers Community Call, targeting the following topics: 1) OpenAIRE Content provider dashboard updates;
2) OpenAIRE aggregation and enrichment processes: specifications and good practices;
3) Community questions & comments.
Presentation of the 2nd Content Providers Community Call, targeting the following topics: 1) OpenAIRE infrastructure updates;
2) Main topic: OpenAIRE Broker Service;
3) Community questions & comments.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Seminar of U.V. Spectroscopy by SAMIR PANDASAMIR PANDA
Spectroscopy is a branch of science dealing the study of interaction of electromagnetic radiation with matter.
Ultraviolet-visible spectroscopy refers to absorption spectroscopy or reflect spectroscopy in the UV-VIS spectral region.
Ultraviolet-visible spectroscopy is an analytical method that can measure the amount of light received by the analyte.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
A brief information about the SCOP protein database used in bioinformatics.
The Structural Classification of Proteins (SCOP) database is a comprehensive and authoritative resource for the structural and evolutionary relationships of proteins. It provides a detailed and curated classification of protein structures, grouping them into families, superfamilies, and folds based on their structural and sequence similarities.
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
OpenAIRE compatibility for DSpace repositories - OR 2014 workshop
1. OpenAIRE compatibility
for DSpace repositories
OPEN REPOSITORIES 2014
JUNE 9, HELSINKI, FINLAND
Pedro Principe, José Carvalho,
Eloy Rodrigues, Ricardo Saraiva
University of Minho
3. AGENDA
OR2014 @ Helsinki
1. Overview of the OpenAIREplus project & the OpenAIRE
guidelines
2. Presentation of the OpenAIRE guidelines for Literature
Repositories: Aim, versions and specifications
• OpenAIRE compatibility status: levels and OAI sets
3. How to make the repository OpenAIRE compatible: DSpace
repository platform
• OAI Extended & OpenAIRE Authority Control
• OAI 2.0 concepts – XOAI Core Library
4. Demo RepositóriUM: OpenAIRE compatibility in practice
5. OpenAIRE validator and registration process
5. What is OpenAIRE
• A Participatory European Open Access infrastructure
to manage scientific publications and associated
scientific material via repository networks.
• Supports discovery, sharing and re-use of Open
Access publications and EC funded research results.
• Enhances publications by interconnecting them with
data sets, funding information, related publications,
institutional afiliation, metrics...
OR2014 @ Helsinki
9. EC OA Mandate Progression
FP7 OA Pilot (2008)
• Grant agreement SC39
• 20% programme areas
• Deposit in Repositories
• ERC‘s OA Guidelines: Deposit
in discipline (or institutional)
repositories. Cap embargo.
Horizon 2020 (2014)
• All grant agreements
• 100% programme areas
• Deposit in Repositories
• Open Data Pilot
OR2014 @ Helsinki
11. OpenAIREplus
• OpenAIRE is moving from a publication infrastructure to a
more comprehensive infrastructure that covers all types of
scientific output.
• To put this into practice an integrated suite of guidelines
were developed with specific requirements supporting
the goal of OpenAIRE and the European Commission.
• Managers of scholarly communication systems across
Europe will be able to support authors to fulfill the EC
Open Access requirements, as well as the requirements
of other (national or international) funders with whom
OpenAIRE cooperates.
OR2014 @ Helsinki
12. OpenAIRE Guidelines
• OpenAIRE has collaborated with key stakeholders and has
produced three sets of guidelines for its data providers, all
based on existing well-established standards.
• Provide additional support for OAI Aggregators and Open
Access Journals to maintain provenance on the record or
at journal level.
• Best practices for the use of transfer protocol (OAI-PMH),
metadata formats, controlled vocabularies.
What are the…
OR2014 @ Helsinki
13. How do they work?
• Assist heterogeneous e-infrastructures like repositories,
data archives and CRIS to interoperate in one common
information space.
• Validation / Registration of OpenAIRE compatible data
sources.
• Metadata is aggregated through simple OAI-sets: for
thematic and institutional repositories
OR2014 @ Helsinki
14. How do they work?
• Identification of Open Access and funded research results by
OAI-Sets:
• ‘openaire’ – expose Open Access publications and/or Funded publications
• ‘openaire_data’ – only expose datasets fulfilling at least one of the following
criteria:
• The dataset is outcome of a funded research project
• The dataset is linked with a publication in the OpenAIRE information space
• ‘openaire_cris’ – Different OAI-PMH sets need to be made available: for each
entity type (e.g. get all records of cfProject), for the entire CERIF XML graph
• Regular harvesting from the data sources.
• Latest schema guarantees backwards-compatibility with previous
versions (‘ec_fundedresources’).
OR2014 @ Helsinki
16. OpenAIRE Guidelines
• Find and discuss the guidelines at: guidelines.openaire.eu
• Test and register the repository at: validator.openaire.eu
• Find support and more info at: www.openaire.eu
How to get involved?
Wiki: http://guidelines.openaire.eu
OR2014 @ Helsinki
19. AUGUST 2010
initial document
NOVEMBER 2010
(V. 1.1)
OCTOBER 2012
(V. 2.0)
Compatibility for
aggregators.
Extended
Namespace for
Project id.
DECEMBER 2012
(3.0 beta)
APRIL 2013
(3.0)
OAI set has been renamed
from ec_fundedresources to
openaire.
New relation elements for
indicating external identifiers,
references and connections to
datasets.
Literature Guidelines – versions
EC funded content
EC and/or other
funded content
Open Access and
EC and/or other
funded content
20. Guidelines 1.0 >> 2.0
• Provide the OpenAIRE compatibility for repositories and
aggregators.
• Introduces two main changes:
• Support for aggregators to become OpenAIRE compatible in order to
expose their metadata to the OpenAIRE infrastructure.
• Extended namespace for project identification.
• Support a generic way of expressing project information,
allowing its use not only for EC/FP projects, but ideally for any
funder and project (national or international).
• Repositories that are already OpenAIRE compatible will remain
compatible with no additional work.
• The mandatory parts are the same as in the Guidelines 1.1.
OR2014 @ Helsinki
21. Versions – useful links
1. http://www.openaire.eu/en/component/content/article/207
i. http://www.openaire.eu/en/component/attachments/download/79 (1.1)
2. http://www.openaire.eu/en/component/content/article/9-news-events/427
i. http://www.openaire.eu/about-openaire/publications-presentations/public-
project-documents/doc_download/431-openaire-guidelinesv2-0en (2.0)
3. http://guidelines.openaire.eu (3.0)
OR2014 @ Helsinki
22. Why specific guidelines?
needed to…
FUNDING INFORMATION
ACCESS RIGHTS AND LICENSE INFO
REFERENCED DATASETS & RELATED PUBLICATIONS
EMBARGO DATE INFORMATION
OR2014 @ Helsinqui
23. OpenAIRE Guidelines
• The OpenAIRE guidelines are supplementary
and built on top of the DRIVER Guidelines
• Plus fields: projectID, accessRights, embargoEndDate.
• All aspects of the DRIVER Guidelines are valid,
with a very few exceptions.
• Guidelines with specific requirements
supporting the goal of OpenAIRE and the EC.
OR2014 @ Helsinki
24. OpenAIRE Set
• Content definitions:
• The content to be inserted in the OpenAIRE set must be (EC)
funded content (1st only EC, after Oct. 2012 for any funder (national
or intern.)).
• Set naming
OR2014 @ Helsinki
setName setSpec*
The OpenAIRE set EC_funded_resources set ec_fundedresources
26. projectID
Element name projectID
DCMI definition dc:relation
Usage Mandatory
Usage instruction A vocabulary of projects will be exposed by OpenAIRE through
OAI-MPH, and available for all repository managers. Values will
include the project name and projectID.
The projectID equals the Grant Agreement number, and is defined
by the namespace: info:eu-repo/grantAgreement/Funder/
FundingProgram/ProjectNumber/
Jurisdiction/ProjectName/ProjectAcronym/
Example:
<dc:relation> info:eu-repo/grantAgreement/EC/FP7/123456 </dc:relation>
<dc:relation> info:eu-repo/grantAgreement/EC/FP7/12345/EU//OpenAIRE </dc:relation>
27. accessRights
Element name accessRights
DCMI definition dc:rights
Usage Mandatory
Usage instruction Use values from vocabulary Access Rights at
http://wiki.surffoundation.nl/display/standards/info-
eu-repo/#info-eu-repo-AccessRights;
• info:eu-repo/semantics/closedAccess
• info:eu-repo/semantics/embargoedAccess
• info:eu-repo/semantics/restrictedAccess
• info:eu-repo/semantics/openAccess
Examples:
<dc:rights> info:eu-repo/semantics/openAccess </dc:rights>
28. embargoEndDate
Element name embargoEndDate
DCMI definition dc:date
Usage Recommended
Usage instruction Recommended when accessRights = info:eu-
repo/semantics/embargoedAccess
The date type is controlled by the name space info:eu-
repo/date/embargoEnd/, see
http://wiki.surffoundation.nl/display/standards/info-
eu-repo/#info-eu-repo-DateTypesandvalue. Encoding
of this date should be in the form YYYY-MM-DD
(conform ISO 8601).
Examples:
<dc:date> info:eu-repo/date/embargoEnd/2011-05-12 <dc:date>
30. OpenAIRE Guidelines
Aim
Provide orientation for repository managers to define and
implement their local data management policies according to the
requirements of the OpenAIRE.
These guidelines are intended to guide repository manager to
expose to the OpenAIRE infrastructure not only EC funded
publications, but also other Open Access publications, regardless of
their funding.
Merger of the DRIVER Guidelines into the context of OpenAIRE
Guidelines.
Part of a set of OpenAIRE Guidelines…
For Literature repositories 3.0
31. OpenAIRE Guidelines
What’s new:
• The OpenAIRE OAI set has been renamed from
‘ec_funded_resources’ to ‘openaire’.
• New elements for indicating external identifiers,
relations to other publications (references), and
relations to research datasets have been defined.
For Literature repositories 3.0
OR2014 @ Helsinki
32. Metadata field - Contents
1. Field Name
2. DC Field
3. Usage
4. Usage Instruction
5. Do Not Confuse With
6. Since
7. Examples
8. Comments
OR2014 @ Helsinki
33. Alternative Identifier
Element name Alternative Identifier
DCMI definition dc:relation
Usage Recommended
Usage instruction List alternative identifiers for this publication that are
not the primary identifier (repository splash page), e.g.,
the DOI of publisher’s version, the PubMed/arXiv ID.
The term is defined by info:eu-
repo/semantics/altIdentifier info:eu-
repo/semantics/altIdentifier/<scheme>/<ident
ifier> where <scheme> must be one of the
following: Ark,arxiv, doi, hdl, isbn, purl…
Example
<dc:relation> info:eu-repo/semantics/altIdentifier/doi/10.1234/789.1 </dc:relation>
34. Referenced Dataset
Element name Referenced Dataset
DCMI definition dc:relation
Usage Recommended
Usage instruction Encodes links to research datasets connected
with this publication. The syntax of info:eu-
repo/semantics/dataset is: info:eu-
repo/semantics/dataset/<scheme>/<identifier
> where <scheme> must be one of the
following: Ark,arxiv, doi, hdl, isbn, purl…
Example
<dc:relation> info:eu-repo/semantics/dataset/doi/10.1234/789.1 </dc:relation>
35. Referenced Publication
Element name Referenced Publication
DCMI definition dc:relation
Usage Recommended
Usage instruction Encode links to publications referenced by this
publication. The syntax of info:eu-
repo/semantics/reference is: info:eu-
repo/semantics/reference/<scheme>/<identifie
r> where <scheme> must be one of the
following: ark, arxiv, doi, hdl, isbn…
Examples:
<dc:relation> info:eu-repo/semantics/reference/doi/10.1234/789.1
</dc:relation>
38. Compatibility status
OR2014 @ Helsinki
OpenAIRE
basic
Only Open
Access
content
OpenAIRE
2.0
EC funded
content
OpenAIRE
2.0 +
Open Access
and EC
funded
content
OpenAIRE
3.0
Open Access
and/or EC
funded
and/or
National/oth
er funded
content
39. Compatibility status
OR2014 @ Helsinki
OpenAIRE
basic
Only Open
Access content
via driver oai
set
OpenAIRE
2.0
EC funded
content
via
ec_funded_re
sources oai
set
OpenAIRE
2.0 +
Open Access
and EC funded
content
via driver and
ec_funded_res
ources oai set
OpenAIRE
3.0
Open Access
and/or EC
funded and/or
National/other
funded content
via openaire
oai set
44. Topics
• OpenAIRE compatibility for Dspace versions
• OAI Extended Addon
• XOAI addon
• OAI 2.0
• Specific metadata values
• Authority Control Addon
OR2014 @ Helsinki
45. OpenAIRE compatibility for
different Dspace versions
OR2014 @ Helsinki
Via OAIextended Addon and also via XOAI addonDspace 1.8.2
• Compatibility with OpenAIRE 2.0 guidelines
OAI 2.0 is a standard part of DSpace 3.0DSpace 3
• Compatibility with OpenAIRE 2.0 guidelines via XOAI.
• (fix ‘info:eu-repo/grantAgreement/EC/FP’ on the filter ‘openairerelationFilter’)
OAI 2.0 is a standard part of DSpace 4.0DSpace 4
• OpenAIRE 2.0 compatibility via XOAI and will be partially compatible with
OpenAIRE 3.0 guidelines via patch (to be presented briefly).
OpenAIRE compatible versionDSpace 5
• Compatibility with OpenAIRE 3.0 and OpenAIRE data 1.0
46. OAI extended Addon
OAI Extended Addon (or a patch to be more precise):
• Extends the base functionality of the OAI-PMH interface
and delivers repository administrators more flexibility and
functionalities to select and filter the information.
• The purpose of the OAI Extended Addon was to modify the
OAI Interface's output, showing only items that were
compliant with the DRIVER Guidelines.
• The Addon provides also the tools to create a set according
to the requirements of the OpenAIRE Guidelines, helping
European repositories to become OpenAIRE compliant.
• Other features are: hability to show didl schema and ETDMS
itens… can easily be configured, changed or extended.
48. OAIextended
•Initially created for the DRIVER Guidelines
• Since Nov. 2010 enables OpenAIRE compatibility.
How?
• Filter all the records that have a dc.relationwith:
info:eu-repo/grantAgreement/EC/FP7/??????
• To the EC Funded Resources SET
OpenAIRE 2.0 guidelines set
50. XOAI
• XOAI is a java implementation of an adaptable OAI-PMH
data provider interface.
• Enabling features like:
• OpenAIRE and Driver compliance
• Item filtering and formatting
• Style Sheet Support
• Virtual sets
• Virtual contexts.
XOAI info: https://github.com/lyncode/xoai
XOAI guide: http://www.lyncode.com/dspace/addons/xoai/doc/XOAI_en.pdf
What is XOAI Add-on? (for DSpace 1.8.x)
OR2014 @ Helsinki
51. OAI 2.0
What is OAI 2.0?
OAI 2.0 is a Java implementation of an OAI-PMH data provider
interface that uses XOAI, an OAI-PMH Java Library.
Why OAI 2.0?
Projects like OpenAIRE, Driver have specific metadata
requirements.
As the OAI-PMH protocol doesn't establish any frame to
these specifics, OAI 2.0 can have more than one instance of
an OAI interface (feature provided by the XOAI core library)
so one could define an interface for each project.
OAI 2.0 is a standard part of DSpace 3.0
OR2014 @ Helsinki
52. OAI 2.0
• With a Filter is possible to select information from the
data source.
• A Transformer allows to make some changes in the
metadata before showing it in the OAI interface
• OAI 2.0 also adds a new concept to the OAI-PMH basic
specification, the concept of context.
http://www.example.com/xoai/driver
http://www.example.com/xoai/openaire
http://www.example.com/xoai/request
Concepts: Filter, Transformer and Context
OR2014 @ Helsinki
53. OAI 2.0
DRIVER OPENAIRE
Contexts could be seen as virtual distinct OAI interfaces
OR2014 @ Helsinki
http://repositorium.sdum.uminho.pt/oai/driver
http://repositorium.sdum.uminho.pt/oai/openaire
http://repositorium.sdum.uminho.pt/oai/request
56. OAI 2.0 (ec_fundedresources set)
Webinars on OpenAIRE compatibility for repositories – March/April 2014
http://repositorium.sdum.uminho.pt/oai/openaire?verb=ListSets
57. OAI 2.0 (record)
Webinars on OpenAIRE compatibility for repositories – March/April 2014http://repositorium.sdum.uminho.pt/oai/openaire?verb=ListRecords&metadataPrefix=oai_dc&set=ec_fundedresources
58. Specific metadata values
• Have a dc:relation field in input-forms.xml to projects.
• You can also use the OpenAIRE Authority Control
Addon to facilitate the search process of the project
identification.
• http://projeto.rcaap.pt/index.php/lang-en/consultar-recursos-
de-apoio/remository?func=fileinfo&id=354
How do you easily add… dc:relation with the project ID
OR2014 @ Helsinki
59. Specific metadata values
• Just use a combo-box for dc:rights to input the 4 options:
• info:eu-repo/semantics/closedAccess
• info:eu-repo/semantics/embargoedAccess
• info:eu-repo/semantics/restrictedAccess
• info:eu-repo/semantics/openAccess
• Use a input-box for dc:date to insert the embargo end
date:
• <dc:date> info:eu-repo/date/embargoEnd/2014-05-12 <dc:date>
+ info: https://wiki.duraspace.org/pages/viewpage.action?pageId=33238567
http://colab.mpdl.mpg.de/mediawiki/ESciDoc_Application_Profile_OpenAIRE
How do you easily add… dc:rights and embargo end date
OR2014 @ Helsinki
60. Addon
OpenAIRE Authority Control
• This Addon use Dspace “Authority Control”
functionality:
• provides a way to list and verify OpenAIRE projects
(FP7);
• the list of projects is maintained as a web-service
• a local cache is created in order to be queried by users
• only adds the correct value in dc.relation field
• Main goals:
• Simplify and standardize the projects (ID) identification
in the deposit process;
• Facilitates compliance with the OpenAIRE guidelines
62. OpenAIRE
Authority Control Addon
• Allows users to search and include FP7 projects ID in the
metadata of the records disposed in accordance with the
guidelines
* Needs the OAIextended Addon to create the set
(ec_fundedresources)
68. RepositóriUM
Currently running DSpace V3.2
OR2014 @ Helsinki
OAI 2.0 is a standard part of DSpace 3.0
OAI 2.0 is a Java implementation of an OAI-PMH data provider interface that
uses XOAI, an OAI-PMH Java Library.
OAI 2.0 can have more than one instance of an OAI interface
(feature provided by the XOAI core library) so one could define an
interface for each project with specific metadata:
http://repositorium.sdum.uminho.pt/oai/oai?verb=ListSets
http://repositorium.sdum.uminho.pt/oai/driver?verb=ListSets
http://repositorium.sdum.uminho.pt/oai/openaire?verb=ListSets
69. RepositóriUM
Currently running DSpace V3.2
OR2014 @ Helsinki
http://repositorium.sdum.uminho.pt/oai/openaire?verb=GetRecord&metadataPrefix=oai_dc&iden
tifier=oai:repositorium.sdum.uminho.pt:1822/22267
70. RepositóriUM
Currently running DSpace V3.2
OR2014 @ Helsinki
/dspace/config/crosswalks/oai/transformers
Bug fix:
‘info:eu-repo/grantAgreement/EC/FP’ on the filter ‘openairerelationFilter’)
71. OR2014 @ Helsinki
Assuming the variables $DSPACE_SRC, $ADDON_SRC and $DSPACE_BIN to identify the locations of the
following directories: DSpace sources, OpenAIRE Authority Control Add-on source and DSpace deployment
directory (same as dspace.dir at dspace.cfg file).
Steps
Step 1 : Copy Source
cp -r $ADDON_SRC/data/dspace-source/* $DSPACE_SRC/
Step 2 : Add messages
cat $ADDON_SRC/data/Messages.properties >> $DSPACE_SRC/dspace-
api/src/main/resources/Messages.properties
In the package it's also provided the portuguese message translation
cat $ADDON_SRC/data/Messages_pt_PT.properties >> $DSPACE_SRC/dspace-
api/src/main/resources/Messages_pt_PT.properties
OpenAIRE Authority Control
Installing openaireauthoritycontrol_v3.0 (for Dspace 3.2)
72. OR2014 @ Helsinki
Step 3 : Configure DSpace
Uncomment the authority control plugins and add the new one (suppose installation over a
clean DSpace 3.2), so at $DSPACE_SRC/dspace/config/dspace.cfg change
plugin.named.org.dspace.content.authority.ChoiceAuthority =
org.dspace.content.authority.OpenAIREAuthority = OpenAIRE
Also add:
choices.plugin.dc.relation = OpenAIRE
choices.presentation.dc.relation = lookup
authority.controlled.dc.relation = true
to DSpace Authority Control Manager, and also add:
openaire.projects.filename = ${dspace.dir}/config/openaire-cache.list
openaire.projects.url = "http://api.openaire.research-
infrastructures.eu:8280/is/mvc/openaire/export/FP7/ALL/ALL/project/dspace.do"
# Minimum of chars to start searching on the list (default >= 4)
openaire.projects.suggest.minchar = 4 # Maximum of projects listed (default <=
10)openaire.projects.suggest.max = 20
OpenAIRE Authority Control
Installing openaireauthoritycontrol_v3.0 (for Dspace 3.2)
73. OR2014 @ Helsinki
Step 4: Configure input-forms.xml
At $DSPACE_SRC/config/input-forms.xml after '<page number="1">' add:
<field>
<dc-schema>dc</dc-schema>
<dc-element>relation</dc-element>
<dc-qualifier></dc-qualifier>
<repeatable>false</repeatable>
<label>OpenAIRE Project Identifier</label>
<input-type>onebox</input-type>
<hint>Enter the search term (number, name or acronym) of the European project (EC
/ ERC) and click on the magnifying glass to select the project. <a
href="http://www.openaire.eu/open-access/open-access-in-fp7 ">More
Information</a></hint>
</field>
OpenAIRE Authority Control
Installing openaireauthoritycontrol_v3.0 (for Dspace 3.2)
User view
74. OR2014 @ Helsinki
Post Installation
After building DSpace (mvn & ant - see the DSpace Documentation), configure cron to
refresh the openaire project list, for example:
0 0 * * * $DSPACE_BIN/bin/openaire-refresh-list
It's also recommended to execute the same script just after deploying the add-on
(after building DSpace) for the first time, this will download the list of OpenAIRE
projects, this is required for the add-on to work properly.
$DSPACE_BIN/bin/openaire-refresh-list
OpenAIRE Authority Control
Installing openaireauthoritycontrol_v3.0 (for Dspace 3.2)
77. By editing the item metadata
Add the field dc.relation if it doesn’t exist in the item…
78. By editing the item metadata
Unlock the key authority value for manual editing…
79. By editing the item metadata
Search by the name or the project id number…
80. By editing the item metadata
Block the dc.relation field manual edition and update the item
81. OR2014 @ Helsinki
Promote awareness and disseminate the OpenAIRE compliance regularly
within your academic & researchers community;
Provide the OpenAIRE compatibility of your repository trough the OAIextend
or the XOAI Add-ons;
Install on you repository the OpenAIRE authority control Add-on for
facilitating the publications submission and the correct filling of the necessary
information;
Monitor periodically your repository in search for EC & ERC funded
publications and update the necessary metadata whenever needed.
Recommendations
84. Registration Steps
1.Register your repository in OpenDOAR
OpenDOAR is an authoritative worldwide directory of
academic open access repositories.
2. Test compliancy with OpenAIRE
Make your repository OpenAIRE complaint – by
implementing the OpenAIRE Guidelines
3. Add your repository in OpenAIRE
OpenAIRE in collaboration with OpenDOAR provides you an
easy web tool to help you register the repository.
85. 1. OpenDOAR
• The first step is to register your repository in
OpenDOAR.
• If you are already registered in OpenDOAR:
• Check if the information is update
• Attention to the URL and admin email
86. 2. Test the OpenAIRE
compliance
• After you have made some progress in implementing
the guidelines you should run a compliancy test.
• The OpenAIRE provides a validator where you can verify if
the repository is truly compatible with the guidelines.
• Enter the OAI-PMH base URL of your repository and
choose to test your repository against the OpenAIRE rule
set.
• After running the test you can browse the results.
• The results are updated periodically, and the whole test
might take some time to finish.
89. Interfaces and publishing protocols
• Compatibility level "OpenAIRE 3.0" corresponds to run a
validation test on "openaire" set.
• Compatibility level "OpenAIRE 2.0" corresponds to run a
validation test on "ec_fundedresources“ set.
• Compatibility level "Driver“corresponds to run a validation
test on “driver“ set.
OR2014 @ Helsinki
92. Run Compatibility Test:
View/Select Rules
for Usage
Use of OAI-DC (M)
Use of OAI-PMH:
'openaire' or
'ec_fundedresources' or
'driver' set must exist (M)
Use of OAI-PMH:
'openaire' set must exist (M)
driver set must exist (R)
ec_fundedresources set must
exist (openaire2.0)
for Content
Field Access Level (M)
Field Alternative Identifier (R)
Field Audience (R)
Field Contributor (R)
Field Coverage (R)
Field Creator (M)
Field Date of Publication (M)
Field Description (MA)
Field Embargo End Date (MA)
Field Format (R)
Field Language (R)
Field License Condition (R)
Field Project Identifier for
ecfundedresources (M)
Field Project Identifier for
openaire(MA)
Field Publication Type (M)
Field Publication Version (R)
Field Publisher (MA)
Field Referenced Dataset (R)
Field Referenced Publication (R)
Field Resource Identifier (M)
Field Source (M)
Field Subject (MA)
Field Title (M)
94. Run Compatibility Test:
Score information
Each rule is assigned a weight. The score is estimated as
the weighted average of the percentage of errors for each
rule.
For example, for rules r1, r2, r3 with corresponding weights
w1, w2, w3, if the percentage of errors is p1, p2, p3, then
the score is calculated by the following formula:
score = (w1*p1 + w2*p2 +w3*p3) / w1+w2+w3
You can find the weights of the various rules used in a test
inside its report.
How the score is computed
95. 3. Join OpenAIRE
1. Add and correct any details in the form and click submit.
After a short compatibility test against the OpenAIRE
rule set, your repository will be ready to join OpenAIRE.
2. An email will be sent to the repository administrator to
confirm this request. Please make sure you have
contacted them before registering.
3. If the compatibility test does not succeed, you will be
unable to join OpenAIRE until you correct all the errors
that are found. Then you must re-submit your request.
100. Links
• Find and discuss the guidelines at: guidelines.openaire.eu
• Test and register the repository at: validator.openaire.eu
• Find support and more info at: www.openaire.eu
• Access the OpenAIRE API documentation: api.openaire.eu
Wiki: http://guidelines.openaire.eu
101. Q&A
OpenAIRE compatibility for repositories
Pedro Principe, pedroprincipe@sdum.uminho.pt
José Carvalho, jcarvalho@sdum.uminho.pt
Eloy Rodrigues, eloy@sdum.uminho.pt
Ricardo Saraiva, rsaraiva@sdum.uminho.pt