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Workshop on 
Developments in Patent 
Law and Policy 
Claire Laporte 
NBER, November 21, 2014
Agenda 
Background: Patents, Industry 
Divisions, and Patent Eligibility 
Cases and Consequences 
Intersection of Legal and Economic 
Theory: Preemption, Disclosure and 
Secrecy 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 22
Background: Patents 
 Background 
 What is a patent? 
 How does it work? 
 Why do we have them? 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 33
The Backdrop: Innovation Policy 
Rights-based vs. production-based systems 
Constitutional underpinnings of patent system: 
Art. I, Sec. 8 empowers Congress “To promote 
the Progress of Science and useful Arts, by 
securing for limited Times to Authors and 
Inventors the exclusive Right to their 
respective Writings and Discoveries.” 
Patent/disclosure tradeoff 
Establishment of Federal Circuit as an aspect 
of innovation policy 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 44
Current Problems in Patent 
Litigation 
 Not many people think they invented DNA … 
But many people do think they invented 
 The internet 
 Mobile telephony 
 E-commerce (internet shopping carts) 
 Methods of doing business, running markets, etc. 
Source: Gene Quinn, “The Rise 
of Patent Litigation in America: 
1980 – 2012,” IP Watchdog, 
April 2013 
 Note: 2013 total was 6092! 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 55
Problems in Patent Litigation: 
Trolls 
Lemelson and submarine patents – pre-GATT 
patent terms 
“Troll” litigation in Eastern District of Texas 
Total cost of patent litigation leaps into the 
high 7 figures 
“Nuisance value” settlements don’t come cheap 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 66
Problems With Patent Quality 
Perception of low quality of troll-owned 
patents. Example: 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 77
One Patent Law, Two Sectors 
 IT, software, and business methods: 
 Abundant trolls 
 Abundant litigation, with litigation as investment vehicle 
 Major companies mostly not dependent on patents to 
protect products 
 Technology turnover is swift, and patent term is longer 
than needed 
 Biotech, pharmaceuticals, devices, diagnostics: 
 Patents protect products 
 Litigation is typically brought by practicing entity 
 Every minute of patent term counts – note 
pharmaceutical-to-generic price erosion 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 88
Patent Value in Life Sciences 
Long lead-times in product development 
Companies need to attract investment long 
before product launch 
Patents as proxies for company value 
Massive licensing industry, led by non-profits 
Non-exclusive licenses for platform technologies 
 Exclusive licenses under Bayh-Dole for product-oriented 
patents 
 Cross-licensing and royalty stacking 
Non-speculative litigation 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 99
Legal Issue: Statutory 
Interpretation 
Legal issue: scope of 35 U.S. Code § 101: 
 “Whoever invents or discovers any new and useful 
process, machine, manufacture, or composition of 
matter, or any new and useful improvement 
thereof, may obtain a patent therefor, subject to 
the conditions and requirements of this title.” 
Judges have added many qualifiers and exceptions. 
This is not the sole test for patentability. 
 Claims must not be obvious or anticipated 
 Claims must be described and enabled 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1100
Supreme Court Uses Section 101 
As a Vehicle for Patent Reform 
Early rumbling: 
Labcorp v. Metabolite (2006): 
Justice Breyer pushed hard to nix this claim – on 
Section 101 grounds. 
Starting in 2012, the Supreme Court issued 
several decisions that changed the standards 
for what could be patented. 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1111
What’s Not Patent-Eligible? 
“Products of nature” 
AMP v. Myriad (2013) 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1122
What’s Not Patent-Eligible? 
“Products of nature” 
AMP v. Myriad (2013) 
“Laws of nature” 
Prometheus v. Mayo 
(2012) 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1133
What’s Not Patent-Eligible? 
“Products of nature” 
AMP v. Myriad (2013) 
“Laws of nature” 
Prometheus v. Mayo 
(2012) 
“Abstract ideas” 
 Bilski v. Kappos (2010) 
 Alice v. CLS Bank (2014) 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1144
Agenda 
Background: Patents, Industry 
Divisions, and Patent Eligibility 
Cases and Consequences 
Intersection of Legal and Economic 
Theory: Preemption, Disclosure and 
Secrecy 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1155
What’s Not Patent-Eligible? 
Thousands of 
issued patent 
claims have 
been invalidated 
as a result of 
these rulings 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1166
Myriad: Early Consequences 
 Certain types of DNA no longer patent-eligible 
 Full-length genes 
 Bacterial DNA 
 Regulatory DNA 
 Other things at risk: 
 Certain therapeutic proteins 
 Stem cells 
 Natural mutants? Non-natural mutants? 
 Antibodies to proteins? 
 Inhibitors of particular enzymes? 
 Methods for using, disabling, or inhibiting natural substances? 
 Scope of Myriad exclusion from patentability is 
undetermined 
 Chaos in the PTO as guidelines are issued and protest 
ensues 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1177
Myriad Fallout in the PTO 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1188
Myriad Fallout in the PTO 
USPTO’s guidance: 
Leads to uncertainty! 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1199
Effect on Existing Portfolios 
Many important portfolios damaged 
 Diagnostics companies relying on full-length patented 
genes 
 Companies exploiting bacterial genomes 
 Research institutions and companies with patents on 
genes and gene products – critical in cancer research 
Immune checkpoint genes 
Signaling proteins 
 Stem cell companies with patented stem cell lines 
 Ariosa – cell-free fetal DNA test, used as substitute for 
amnio 
Adaptation by filing new applications or seeking 
reissue – more on claim drafting later 
 Some portfolios can’t be fixed. 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2200
Prometheus: Background 
Claim was to a method of optimizing the 
amount of a drug to be given to treat an 
immune GI-tract disease, involving 
administering the drug, testing metabolite 
levels, and determining whether they fell 
above or below certain thresholds 
Court strikes this down under Section 101 as 
improperly patenting a law of nature. 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2211
Prometheus: Method Claims 
 Method claims common in all technologies 
 Life sciences 
Diagnostics 
Treatment methods 
 Software 
Business methods 
Image analysis 
Cybersecurity 
And others too numerous to mention 
 Which ones “simply state the law of nature while adding 
the words ‘apply it.’”? 
 Which patents don’t involve the application of laws of 
nature? 
 Application to existing portfolios even broader than Myriad 
 Particular fallout in diagnostics 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2222
Bilski and Alice: Software and 
Business Methods 
No answer on patentability of software 
No answer on patentability of business 
methods 
“Abstract idea” doctrine: market-based 
concepts like 
 Risk hedging in energy markets (Bilski) 
 Mitigating settlement risk via computer algorithm 
(Alice) 
Are actually “abstract ideas” that can’t be 
patented 
Alice: implementing an abstract idea via 
computer does not make that idea patentable. 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2233
Bilski and Alice: Fallout in the 
Courts and the PTAB 
These cases attack the “troll” patents. 
Flood of litigation has been met with flood of 
invalidation. 
Because litigation on these patents is profit-seeking, 
investors are still trying for nuisance-value 
settlements. 
New AIA proceedings in PTAB have been filed 
at double the expected volume. 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2244
Patents Issued by Class (2009=100) 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2255 
450 
400 
350 
300 
250 
200 
150 
100 
50 
0 
2009 2010 2011 2012 2013 
ALL 
BATTERIES 
MOLECULAR 
BIOLOGY 
PROTEINS 
BUSINESS 
METHODS
Class 705 (Business Methods) 
After Alice 
1000 
900 
800 
700 
600 
500 
400 
300 
200 
100 
0 
Class 705 
Alice decided 
on June 19 
Class 705 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2266
Practical Consequences 
Pendulum has swung to an anti-patent 
extreme 
PTAB is overwhelmed but is earning its “patent 
death squad” label 
Legal doctrines to invalidate patents are being 
expanded 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2277
Practical Consequences 
University tech transfer practices have not 
changed 
Patents are still used by the investment 
community as proxies for ultimate company value 
Our licensing practice is still booming 
 Most companies aren’t looking to see which claims 
are invalid 
But some companies are looking to re-draft out of 
trouble 
And venturers into patent litigation are saved 
mainly by the overwhelming incentives to settle 
It takes a while to turn the Titanic! 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2288
Agenda 
Background: Patents, Industry 
Divisions, and Patent Eligibility 
Cases and Consequences 
Intersection of Legal and Economic 
Theory: Preemption, Disclosure and 
Secrecy 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2299
Preemption Concerns 
 Myriad: “Laws of nature, natural phenomena, and abstract ideas 
are not patentable…. Rather, they are the basic tools of scientific 
and technological work [and] lie beyond the domain of patent 
protection.” 
 Prometheus: “Phenomena of nature, … mental processes, and 
abstract intellectual concepts are not patentable, as they are the 
basic tools of scientific and technological work…. And 
monopolization of those tools through the grant of a patent might 
tend to impede innovation more than it would tend to promote 
it.” 
 Alice: “We have repeatedly emphasized this … concern that 
patent law not inhibit further discovery by improperly tying up 
the future use of … building blocks of human ingenuity.” So: the 
court must “search for an inventive concept … that is sufficient 
to ensure that the patent in practice amounts to significantly 
more than a patent upon the [ineligible concept] itself.” 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3300
Preemption Concern in Economic 
Analyses 
The Court’s preemption concerns feature in 
economic analyses too 
It has been difficult to compare the secrecy 
and disclosure paradigms 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3311
Patent-Eligibility Fallout 
From patents to trade secrets - National 
Research Council Report (2005): 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3322
Preemption Concern in Economic 
Analyses 
Analyses focus on patent-to-product connection 
and underestimate importance of exclusionary 
right as commodity 
 Insufficient attention to role of universities and Bayh- 
Dole 
The good: commercialization and the conversion from 
exclusionary right to commercialization obligation 
The bad: possible contribution to higher ed bubble 
 Insufficient attention to licensing 
 Insufficient attention to role of patents in life sciences 
investment 
 Insufficient attention to secrecy paradigm as 
alternative rights-based exclusionary model 
© 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3333
Workshop on 
Developments in Patent 
Law and Policy 
Claire Laporte 
NBER, November 21, 2014

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MIT Workshop on Developments in Patent Law and Policy

  • 1. Workshop on Developments in Patent Law and Policy Claire Laporte NBER, November 21, 2014
  • 2. Agenda Background: Patents, Industry Divisions, and Patent Eligibility Cases and Consequences Intersection of Legal and Economic Theory: Preemption, Disclosure and Secrecy © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 22
  • 3. Background: Patents  Background  What is a patent?  How does it work?  Why do we have them? © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 33
  • 4. The Backdrop: Innovation Policy Rights-based vs. production-based systems Constitutional underpinnings of patent system: Art. I, Sec. 8 empowers Congress “To promote the Progress of Science and useful Arts, by securing for limited Times to Authors and Inventors the exclusive Right to their respective Writings and Discoveries.” Patent/disclosure tradeoff Establishment of Federal Circuit as an aspect of innovation policy © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 44
  • 5. Current Problems in Patent Litigation  Not many people think they invented DNA … But many people do think they invented  The internet  Mobile telephony  E-commerce (internet shopping carts)  Methods of doing business, running markets, etc. Source: Gene Quinn, “The Rise of Patent Litigation in America: 1980 – 2012,” IP Watchdog, April 2013  Note: 2013 total was 6092! © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 55
  • 6. Problems in Patent Litigation: Trolls Lemelson and submarine patents – pre-GATT patent terms “Troll” litigation in Eastern District of Texas Total cost of patent litigation leaps into the high 7 figures “Nuisance value” settlements don’t come cheap © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 66
  • 7. Problems With Patent Quality Perception of low quality of troll-owned patents. Example: © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 77
  • 8. One Patent Law, Two Sectors  IT, software, and business methods:  Abundant trolls  Abundant litigation, with litigation as investment vehicle  Major companies mostly not dependent on patents to protect products  Technology turnover is swift, and patent term is longer than needed  Biotech, pharmaceuticals, devices, diagnostics:  Patents protect products  Litigation is typically brought by practicing entity  Every minute of patent term counts – note pharmaceutical-to-generic price erosion © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 88
  • 9. Patent Value in Life Sciences Long lead-times in product development Companies need to attract investment long before product launch Patents as proxies for company value Massive licensing industry, led by non-profits Non-exclusive licenses for platform technologies  Exclusive licenses under Bayh-Dole for product-oriented patents  Cross-licensing and royalty stacking Non-speculative litigation © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 99
  • 10. Legal Issue: Statutory Interpretation Legal issue: scope of 35 U.S. Code § 101:  “Whoever invents or discovers any new and useful process, machine, manufacture, or composition of matter, or any new and useful improvement thereof, may obtain a patent therefor, subject to the conditions and requirements of this title.” Judges have added many qualifiers and exceptions. This is not the sole test for patentability.  Claims must not be obvious or anticipated  Claims must be described and enabled © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1100
  • 11. Supreme Court Uses Section 101 As a Vehicle for Patent Reform Early rumbling: Labcorp v. Metabolite (2006): Justice Breyer pushed hard to nix this claim – on Section 101 grounds. Starting in 2012, the Supreme Court issued several decisions that changed the standards for what could be patented. © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1111
  • 12. What’s Not Patent-Eligible? “Products of nature” AMP v. Myriad (2013) © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1122
  • 13. What’s Not Patent-Eligible? “Products of nature” AMP v. Myriad (2013) “Laws of nature” Prometheus v. Mayo (2012) © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1133
  • 14. What’s Not Patent-Eligible? “Products of nature” AMP v. Myriad (2013) “Laws of nature” Prometheus v. Mayo (2012) “Abstract ideas”  Bilski v. Kappos (2010)  Alice v. CLS Bank (2014) © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1144
  • 15. Agenda Background: Patents, Industry Divisions, and Patent Eligibility Cases and Consequences Intersection of Legal and Economic Theory: Preemption, Disclosure and Secrecy © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1155
  • 16. What’s Not Patent-Eligible? Thousands of issued patent claims have been invalidated as a result of these rulings © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1166
  • 17. Myriad: Early Consequences  Certain types of DNA no longer patent-eligible  Full-length genes  Bacterial DNA  Regulatory DNA  Other things at risk:  Certain therapeutic proteins  Stem cells  Natural mutants? Non-natural mutants?  Antibodies to proteins?  Inhibitors of particular enzymes?  Methods for using, disabling, or inhibiting natural substances?  Scope of Myriad exclusion from patentability is undetermined  Chaos in the PTO as guidelines are issued and protest ensues © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1177
  • 18. Myriad Fallout in the PTO © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1188
  • 19. Myriad Fallout in the PTO USPTO’s guidance: Leads to uncertainty! © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 1199
  • 20. Effect on Existing Portfolios Many important portfolios damaged  Diagnostics companies relying on full-length patented genes  Companies exploiting bacterial genomes  Research institutions and companies with patents on genes and gene products – critical in cancer research Immune checkpoint genes Signaling proteins  Stem cell companies with patented stem cell lines  Ariosa – cell-free fetal DNA test, used as substitute for amnio Adaptation by filing new applications or seeking reissue – more on claim drafting later  Some portfolios can’t be fixed. © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2200
  • 21. Prometheus: Background Claim was to a method of optimizing the amount of a drug to be given to treat an immune GI-tract disease, involving administering the drug, testing metabolite levels, and determining whether they fell above or below certain thresholds Court strikes this down under Section 101 as improperly patenting a law of nature. © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2211
  • 22. Prometheus: Method Claims  Method claims common in all technologies  Life sciences Diagnostics Treatment methods  Software Business methods Image analysis Cybersecurity And others too numerous to mention  Which ones “simply state the law of nature while adding the words ‘apply it.’”?  Which patents don’t involve the application of laws of nature?  Application to existing portfolios even broader than Myriad  Particular fallout in diagnostics © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2222
  • 23. Bilski and Alice: Software and Business Methods No answer on patentability of software No answer on patentability of business methods “Abstract idea” doctrine: market-based concepts like  Risk hedging in energy markets (Bilski)  Mitigating settlement risk via computer algorithm (Alice) Are actually “abstract ideas” that can’t be patented Alice: implementing an abstract idea via computer does not make that idea patentable. © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2233
  • 24. Bilski and Alice: Fallout in the Courts and the PTAB These cases attack the “troll” patents. Flood of litigation has been met with flood of invalidation. Because litigation on these patents is profit-seeking, investors are still trying for nuisance-value settlements. New AIA proceedings in PTAB have been filed at double the expected volume. © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2244
  • 25. Patents Issued by Class (2009=100) © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2255 450 400 350 300 250 200 150 100 50 0 2009 2010 2011 2012 2013 ALL BATTERIES MOLECULAR BIOLOGY PROTEINS BUSINESS METHODS
  • 26. Class 705 (Business Methods) After Alice 1000 900 800 700 600 500 400 300 200 100 0 Class 705 Alice decided on June 19 Class 705 © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2266
  • 27. Practical Consequences Pendulum has swung to an anti-patent extreme PTAB is overwhelmed but is earning its “patent death squad” label Legal doctrines to invalidate patents are being expanded © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2277
  • 28. Practical Consequences University tech transfer practices have not changed Patents are still used by the investment community as proxies for ultimate company value Our licensing practice is still booming  Most companies aren’t looking to see which claims are invalid But some companies are looking to re-draft out of trouble And venturers into patent litigation are saved mainly by the overwhelming incentives to settle It takes a while to turn the Titanic! © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2288
  • 29. Agenda Background: Patents, Industry Divisions, and Patent Eligibility Cases and Consequences Intersection of Legal and Economic Theory: Preemption, Disclosure and Secrecy © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 2299
  • 30. Preemption Concerns  Myriad: “Laws of nature, natural phenomena, and abstract ideas are not patentable…. Rather, they are the basic tools of scientific and technological work [and] lie beyond the domain of patent protection.”  Prometheus: “Phenomena of nature, … mental processes, and abstract intellectual concepts are not patentable, as they are the basic tools of scientific and technological work…. And monopolization of those tools through the grant of a patent might tend to impede innovation more than it would tend to promote it.”  Alice: “We have repeatedly emphasized this … concern that patent law not inhibit further discovery by improperly tying up the future use of … building blocks of human ingenuity.” So: the court must “search for an inventive concept … that is sufficient to ensure that the patent in practice amounts to significantly more than a patent upon the [ineligible concept] itself.” © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3300
  • 31. Preemption Concern in Economic Analyses The Court’s preemption concerns feature in economic analyses too It has been difficult to compare the secrecy and disclosure paradigms © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3311
  • 32. Patent-Eligibility Fallout From patents to trade secrets - National Research Council Report (2005): © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3322
  • 33. Preemption Concern in Economic Analyses Analyses focus on patent-to-product connection and underestimate importance of exclusionary right as commodity  Insufficient attention to role of universities and Bayh- Dole The good: commercialization and the conversion from exclusionary right to commercialization obligation The bad: possible contribution to higher ed bubble  Insufficient attention to licensing  Insufficient attention to role of patents in life sciences investment  Insufficient attention to secrecy paradigm as alternative rights-based exclusionary model © 2008 Foley Hoag LLP. All Rights Reserved. Presentation Title | 3333
  • 34. Workshop on Developments in Patent Law and Policy Claire Laporte NBER, November 21, 2014