2. 4396 MINIREVIEW APPL. ENVIRON. MICROBIOL.
isms in odor outbreaks in raw or posttreatment water is an
important issue which has yet to be addressed.
Photoautotrophic producers. As noted above, cyanobacteria
are considered to be the major sources of geosmin and 2-MIB
in aquatic environments where photosynthetic growth is pos-
sible (31, 45, 53, 65, 110). More than 200 studies have made
considerable advances in our knowledge of the biochemis-
FIG. 1. Structure of geosmin and 2-MIB. try, taxonomy and ecology of some of the cyanobacteria which
produce these VOCs. Yet even though cyanobacteria are now
considered to be the chief sources of geosmin and 2-MIB, the
number of species (here we refer to the phylogenetic species
while cyanobacteria were not detected at that time. Sugiura concept, since cyanobacteria are asexual [3]) which are signif-
and Nakano (90) concluded that elevated 2-MIB levels in Lake icant producers is unknown, for several reasons. Fewer than 50
Kasumigaura (Japan) were generated by actinomycete activity of the Ͼ2,000 species classified to date (according to the In-
in aerobic sediment layers, based on in vitro observations of ternational Code of Botanical Nomenclature) have been di-
isolates from this habitat. Jensen and coworkers (37) traced the rectly confirmed as producers, while the majority have yet to be
annual spring outbreaks of earthy-musty odor in tap water investigated for their production of these and other VOCs
derived from a major Canadian river to actinomycetes, which (100). Unsightly and highly visible surface blooms are usually
were introduced into these surface waters during snowmelt and considered to be primary sources of source water odor, but in
runoff. Klausen et al. (47) concluded that actinomycetes were fact many of the known cyanobacterial producers are non-
responsible for low concentrations of geosmin and 2-MIB in planktonic (ϳ30%), while the remainder are benthic or epi-
streams flowing past trout breeding aquaculture operations, phytic, with a single isolate from soil (Table 2). Interestingly,
because isolated strains of Streptomyces from these habitats geosmin and 2-MIB production appears to be limited to fila-
were able to synthesize geosmin and 2-MIB, while cyanobac- mentous cyanophytes and to date is unknown among chroo-
teria were not present in large numbers. It is important to note, coccalean taxa. Furthermore, to our knowledge no marine
however, that most of these studies did not investigate benthic cyanobacterium has been identified as a producer of either
or littoral biofilms, which can be a major source of these compound to date; in fact, geosmin has been proposed as a
compounds (see below). Furthermore, while persuasive correl-
chemical land mass homing signal for anadromous fish (94).
ative evidence was presented in each of these studies, none
On the other hand, this may simply reflect the fact that few
provided a direct demonstration that actinomycetes were pri-
people rely on marine sources for drinking water rather than
marily responsible for the malodor. Overall, however, the con-
any relationship with halotolerance. Persson (64) observed that
tribution of actinomycetes to taste-and-odor outbreaks will
among four fresh and brackish water isolates of Oscillatoria
continue to be extremely difficult to assess until methods to
differentiate in situ producing and nonproducing strains are aghardhii (syn. Planktothrix aghardhii), only brackish water
available. clones produced geosmin and 2-MIB, indicating that salinity
It is well known that odor can originate downstream of water per se does not preclude the biosynthesis of these terpenoids.
treatment as a result of heterotrophic biological activity in Along the same lines, geosmin and 2-MIB outbreaks are com-
distribution pipes or filtration beds, and posttreatment produc- mon problems in many areas of the North American prairies,
tion of geosmin has also been documented in several studies. where the presence of an ancient seabed results in highly saline
For example, heterotrophic eukaryotes such as fungi, which and productive surface waters (46, 99).
colonize biofilms in activated filters and distribution pipes, can
generate potent musty-smelling metabolites such as trichloro-
anisole (68). In a recent case, geosmin in treated drinking
water was traced to the disturbance of thick biofilms that had TABLE 1. Actinomycetes and other noncyanobacterial taxa that
developed on the pipe surface of a distribution system from a produce geosmin (GE) and 2-MIB
groundwater-supplied treatment plant (F. Juttner, unpub-
¨
VOC(s) Taxon Reference
lished data). After a change in water treatment processes in the
plant to remove iron from the iron-rich source water, the 2-MIB, GE Penicillium and Aspergillus species 78
biofilms degraded and were sloughed off, releasing high levels GE P. expansum 17
GE Streptomyces albidoflavus 92
of geosmin and leading to consumer complaints. In another GE S. avermitilis 73
case, biological activity in poorly maintained filtration media GE S. citreus 69
was considered to be the most likely cause of high geosmin GE S. griseus 105
levels downstream of filter beds in a small rural treatment plant GE, 2-MIB S. griseofuscus 1
GE S. halstedii 82
(S. B. Watson, unpublished data). The biological sources were
GE S. psammoticus 37
not identified in these last two cases, and it is not known if they GE S. tendae 17
were actinomycetes, fungi, and/or other microorganisms. For GE, 2-MIB S violaceusniger 78
example, myxobacteria (83, 111) and molds such as Penicillium GE, MIB Streptomyces spp. Various
are known prolific sources of earthy odors in sediments and GE Symphyogyna brongniartii (liverwort) 89
GE Vannella sp. (heterotrophic amoeba) 24
foodstuffs (51, 78, 81), and the potential role of these organ-
3. VOL. 73, 2007 MINIREVIEW 4397
TABLE 2. Cyanobacteria producing geosmin (GE) and 2-MIB, listed by current taxonomic names, past synonyms, and primary habitata
Production (ϩ)
Taxon Synonym Habitatb of: Comments
GE 2-MIB
Geitlerinema splendidum Oscillatoria splendida BEN ϩ
Jaaginema geminatum Oscillatoria geminata BEN ϩ
Leibleinia subtilis Lyngbya subtilis BEN ϩ
Lyngbya aestuarii BEN ϩ
Oscillatoria curviceps BEN ϩ
Oscillatoria tenuis var. levis BEN ϩ
Oscillatoria variabilis BEN ϩ
Phormidium allorgei Lyngbya allorgei BEN ϩ
Phormidium amoenum Oscillatoria amoena BEN ϩ
Phormidium breve Oscillatoria brevis BEN ϩ ϩ Strain specific
Phormidium chalybeum Oscillatoria chalybea BEN ϩ
Phormidium cortianum Oscillatoria cortiana BEN ϩ
Phormidium favosum BEN ϩ
Phormidium formosum Oscillatoria formosa BEN ϩ
Phormidium strain LM689 BEN ϩ
Phormidium simplissimum Oscillatoria simplicissima BEN ϩ
Phormidium sp. strain NIVA 51 BEN ϩ ϩ
Phormidium tenue Oscillatoria tenuis BEN ϩ
Phormidium uncinatum BEN ϩ
Phormidium viscosum BEN ϩ
Planktothrix prolifica Oscillatoria prolifica BEN ϩ
Porphyrosiphon martensianus Lyngbya martensiana BEN ϩ
Symplocastrum mulleri
¨ Schizothrix mulleri
¨ BEN ϩ Actinomycete contaminant
Tychonema bornetii Oscillatoria bornetii BEN ϩ Strain specific
Tychonema granulatum Oscillatoria f. granulata BEN ϩ ϩ
Hyella sp. EPI ϩ
Microcoleus sp. EPI ϩ
Anabaena circinalis PL ϩ
Anabaena crassa PL ϩ
Anabaena lemmermannii PL ϩ
Anabaena macrospora PL ϩ
Anabaena solitaria PL ϩ
Anabaena viguieri PL ϩ
Aphanizomenon flos-aquae PL ϩ
Aphanizomenon gracile PL ϩ
Oscillatoria limosa PL ϩ
Planktothrix agardhii Oscillatoria agardhii PL ϩ ϩ Strain specific
Planktothrix cryptovaginata Lyngbya cryptovaginata PL ϩ
Planktothrix perornata Oscillatoria perornata PL ϩ
Planktothrix perornata var. attenuata Oscillatoria perornata var. attenuata PL ϩ
Pseudanabaena catenata PL ϩ ϩ
Pseudanabaena limnetica Oscillatoria limnetica PL ϩ
Symploca muscorum SL ϩ
a
Data from reference 99.
b
BEN, benthic; PL, planktonic; EPI, epiphytic; SL, soil.
BIOSYNTHESIS OF GEOSMIN AND 2-MIB Initially, successful labeling experiments to trace the biosyn-
thetic pathway(s) of geosmin were difficult to perform with strep-
The conclusion that 2-MIB is a monoterpene and geosmin
tomycetes, and they still have not been conducted successfully
an irregular sesquiterpene (Fig. 1) dates back to early labeling
with cyanobacteria. Farnesyl diphosphate is the immediate pre-
experiments with Streptomyces conducted by Bentley and
cursor of cyclic sesquiterpenes (11), but early attempts showed
Meganathan (4). These authors found that both compounds
were labeled when radioactive acetate was administered to that farnesol addition to cultures inhibited the growth of bacteria
cultures, and they interpreted this as an indication of isoprene (16, 88) and cyanobacteria (44), and this compound therefore had
synthesis. 2-MIB showed labeling when methionine with a la- to be rejected as a tool to study the biosynthesis of terpenoids.
beled methyl group was added. The authors concluded that More recently, considerable progress has been made using other
2-MIB is a methylated monoterpene and geosmin a sesquiter- precursors. Experiments showed that labeled geosmin was pro-
pene that has lost an isopropyl group. To our knowledge, no duced by Streptomyces when labeled 1-deoxy-D-xylulose (88) was
further experiments have been conducted to elucidate the bio- added, while labeled mevalolactone and leucine were applied
synthesis of 2-MIB. Geosmin, however, has received consider- successfully with the myxobacteria Myxococcus xanthus and Stig-
able recent interest, and much progress in the knowledge of its matella aurantica (14). These studies, together with other labeling
biosynthetic pathways has been made. and genetic work, have provided evidence that in fact several
4. 4398 MINIREVIEW APPL. ENVIRON. MICROBIOL.
FIG. 2. Simplified biosynthetic scheme (suggested or proven) for the formation of 2-MIB and geosmin in streptomycetes and myxobacteria.
different biosynthetic pathways of isoprenoid synthesis exist in based on the production of labeled geosmin and 2-MIB from
microorganisms, one or more of which may lead to the produc- labeled acetate. However, more recent studies failed to find
tion of geosmin by different taxa (Fig. 2). similar labeling using this precursor (88), and a plausible ex-
Of particular importance is the 2-methylerythritol-4-phos- planation for this apparent inconsistency is that streptomycetes
phate (MEP) pathway. This pathway was only recently discov- are capable of gluconeogenesis and can use acetate and etha-
ered and has been now completely elucidated on the genetic nol as sole C sources (35). When no exogenous sugar is sup-
and enzymatic levels in higher plants (75). Work with Strepto- plied, acetate would be metabolized in long-term experiments
myces showed that labeled geosmin was produced when deu- to sugar compounds, and labeling can then be introduced into
terated [5,4-2H2]1-deoxy-D-xylulose, but not [4,4,6,6,6-2H5]- the MEP pathway. Nevertheless, there is some evidence that
mevalolactone, was administered, demonstrating the predominance some streptomycetes may use both pathways but at different
of the MEP isoprenoid pathway over the mevalonate (MVA) growth stages, with the MEP pathway providing the predomi-
route in these organisms (88). The genes coding for the MEP nant route during active growth and the MVA pathway pro-
pathway have been found in the cyanobacterium Synechocystis viding the predominant route in the stationary phase (84, 85).
sp. strain PCC 6803 (48), although members of this genus (and However, rigorous proof that the MVA pathway is a wide-
other chroococcales) do not produce geosmin. However, this spread and significant route in geosmin biosynthesis is still
suggests that the same isoprenoid pathway may also function in lacking, and there is a need for the development of more
the geosmin-producing cyanobacterial taxa. specific tracing techniques. For example, 3-hydroxy-3-methyl-
The above discussion suggests that the MEP pathway is the glutaryl-CoA reductase is often used as a key enzyme indicat-
major biosynthetic isoprenoid route in many bacterial groups; ing the presence of the MVA pathway (22), but this enzyme
nevertheless, there is some evidence that the MVA pathway is can also function in a catabolic pathway, the breakdown of
also used. The latter pathway may function exclusively in the MVA. Its presence is therefore not necessarily indicative of an
synthesis of geosmin and other isoprenoids in some groups MVA pathway to geosmin.
such as myxobacteria (14) and contribute to geosmin produc- For both geosmin pathways, there has been much recent
tion in the stationary growth phase of streptomycetes (84, 85). interest in the elucidation the final steps: the cyclization of
Archaea use the MVA pathway exclusively for isoprenoid syn- farnesyl diphosphate to a mono- or dicyclic sesquiterpene.
thesis (50), but geosmin producers have yet to be found among Pollack and Berger (69) found that a strong geosmin-produc-
these taxa. Myxobacteria also use the MVA pathway as a major ing strain of Streptomyces citreus also produced measurable
route to synthesize a range of isoprenoid compounds, includ- quantities of the sesquiterpene alcohol (4S,7R)-germacra-
ing geosmin. In these microorganisms a minor pathway starts 1(10)E,5E-diene-11-ol, and they postulated that farnesyl
with L-leucine and feeds label via dimethylacrylyl coenzyme A diphosphate cyclization yields germacradienol as the immedi-
(CoA) into 3-hydroxy-3-methylglutaryl-CoA, a precursor of ate precursor of geosmin. More recently germacradienol/
MVA (14). The original results reported by Bentley and Mega- germacrene D synthases of Streptomyces coelicolor (23, 38) and
nathan (4) favored the MVA pathway for streptomycetes, Streptomyces avermitilis (11) were cloned, and the recombinant
5. VOL. 73, 2007 MINIREVIEW 4399
enzyme was studied in more detail. The enzyme was shown to vide insight into the relative capacities of different taxa to
catalyze the formation of (4S,7R)-germacra-1(10)E,5E-diene- produce these VOCs or allow comparison between different
11-ol, (Ϫ)-(7S)-germacrene D, and geosmin from farnesyl studies. Few studies have differentiated between total and cell-
diphosphate. Magnesium ions supported the reaction; other bound production capacities, which can differ considerably and
cofactors were not necessary (11, 38). However, in these ex- are imprecisely estimated by most current extraction and ana-
periments, germacradienol was the major product and geosmin lytical protocols (see below). Environmental factors (such as
production was minor, while under natural conditions, the light intensity, temperature, ion concentrations, etc.) have
cellular concentrations of geosmin are much higher than those been shown to modulate the production rate of odor com-
of germacradienol. This suggests that the enzymatic environ- pounds for both cyanobacteria (57, 58, 59, 76, 79, 95, 102) and
ment may strongly affect the formation of these two products. actinomycetes (1, 15, 17, 82, 92, 105), but these alone cannot
Our understanding of the genetic coding and of the sesquiter- explain the substantial differences in concentrations often ob-
pene synthase involved in the Mg-dependent conversion of served in surface waters under natural conditions (Table 3
farnesyl diphosphate to germacradienol was further advanced gives an overview of typical environmental levels).
by two recent independent studies. Gust and coworkers (23) Actinomycetes. In general, techniques currently used to
used PCR-targeted gene replacement to identify the gene measure actinomycete abundance typically yield poor correla-
(Sco6073) (cyc2), which codes for a synthase with two domains, tions between these estimates and geosmin and/or 2-MIB con-
with one required for geosmin biosynthesis. In a parallel study, centrations in surface waters, for several reasons. First, acti-
Cane and Watt (10) used PCR amplification of this gene to nomycetes are difficult to enumerate. They are filamentous
determine the identity of this synthase as a protein encoded by (hyphal), spore-producing organisms which fragment when
2,181 bp (designated SC9B1.20), and they concluded that pro- plated, with each fragment or spore yielding a CFU. Highly
duction of germacradienol represents the committed step in selective media are needed to identify and enumerate actino-
the geosmin biosynthetic pathway. mycetes; different studies use different media, and these media
Several studies used precursors with deuterium labeling in vary in the biomass they will generate (18). Estimates using
different positions to investigate the cyclization process leading these traditional methods suggest that the abundance of acti-
to the formation of geosmin. A number of different mecha- nomycetes in open waters is generally low, ranging from below
nisms and intermediates were postulated by the authors to detection to ϳ1.4 ϫ 106 cells ⅐ literϪ1 (64, 113, 114). Immu-
explain the labeling patterns observed (10, 11, 14, 25, 38, 88). nofluorescence techniques have been employed extensively in
However, some key questions remain unresolved, notably, medical and soil sciences to investigate these and other mixed
which of the postulated intermediates occur in which taxa and microbial assemblages but are often limited by their nonspe-
under which conditions they are released and contribute to the cific nature, and without appropriate controls, these methods
odor bouquet of a particular microorganism. Importantly, for can yield estimates that include many (other) bacterial taxa
cyanobacteria it has not been resolved which pathway is used, and which differ significantly from CFU. Recent work, how-
while for streptomycetes, it has yet to be established whether ever, has made considerable advances in sensitive enumeration
all strains use the same pathway or whether both pathways are techniques using fluorescence in situ hybridization (FISH),
used for geosmin under different growth conditions. This in- FISH with catalyzed reporter deposition, and combined micro-
sight is essential to explain why geosmin producers and non- autoradiography. These techniques indicate that abundances
producers, and low and high producers, are found among dif- of active streptomycetes may be considerably higher in some
ferent species and cospecific strains of both cyanobacteria and waters, reported at levels of 0.4 ϫ 108 to 3.7 ϫ 108
streptomycetes. A second, molecular level of understanding is cells ⅐ literϪ1 in oligotrophic and eutrophic streams and fish
also missing, which is fundamental to these questions: the ponds (60). In essence, because of the large discrepancies
complete knowledge of the genes and enzymes responsible for among these methods, our knowledge of the actual abun-
the synthesis of geosmin and other sesquiterpenes and their dances of active cells in different environments is almost com-
regulating mechanisms. pletely lacking.
A further key consideration is that not all streptomycetes
TRACING GEOSMIN AND 2-MIB PRODUCERS produce geosmin or 2-MIB (13), yet plate counts and other
enumeration methods estimate a total count, i.e., both odor
In the following section, we elucidate several key factors producers and non-odor producers. Studies using FISH and
which may explain why many efforts to trace the biological FISH with catalyzed reporter deposition have demonstrated
sources of geosmin and 2-MIB have been unsuccessful. Above that active actinomycetes (which metabolize and/or incorpo-
all, a reliable method to distinguish between the contributions rate labeled thymidine) are ubiquitous (60) and can be impor-
of cyanobacteria and actinomycetes (or other potential pro- tant components of the plankton even during periods when
ducers) to geosmin and 2-MIB in surface waters has not been there is little or no odor (47, 49). Authors have reported a wide
developed, and a considerable number of taste-and-odor out- range in the proportion of potentially odorous actinomycetes
breaks caused by geosmin and/or 2-MIB remain unsolved (7). in different environments: between approximately 20% and
Importantly, there is a general lack of standardized units 70% of isolates from river and lake samples have been found
among papers reporting production and production rates, to be active (in vitro) producers of geosmin and/or 2-MIB (37,
which should be expressed per volume/weight of cells or per 47, 113, 114).
unit chlorophyll (or any other cell-specific parameter). Fre- In addition to the above points, it is important to note that
quently, however, these measures are given as geosmin and there is considerable variation in the cell-specific capacity to
2-MIB concentrations per culture volume, which does not pro- produce geosmin or 2-MIB among active individual isolates.
6. 4400 MINIREVIEW APPL. ENVIRON. MICROBIOL.
TABLE 3. Typical concentrations of geosmin (GE) and 2-MIB in different habitats, microorganisms, and drinking water
Source Details Concna Reference
Cultures
Cyanobacteria Oscillatoria brevis, light limited 0.35 g GE mg (dry wt)Ϫ1 ϭ 58 g GE mg Chl aϪ1 57
Anabaena lemmermannii, P limited, total GE 0.15 g GE mg (dry wt)Ϫ1 ϭ 670 g GE mg Chl aϪ1 Wab
A. lemmermannii, P limited, cell-bound GE 0.14 g GE mg (dry wt)Ϫ1 ϭ 500 g GE mg Chl aϪ1 Wa
A. lemmermannii, P replete, total GE 0.5 g GE mg (dry wt)Ϫ1 ϭ 850 g GE mg Chl aϪ1 Wa
A. lemmermannii, P replete, cell-bound GE 0.41 g GE mg (dry wt)Ϫ1 ϭ 700 g GE mg Chl aϪ1 Wa
Streptomycetes Streptomyces tendae, grown on different agars 0.25–33 (52)c ng GE mg (dry wt)Ϫ1 18
Lake water
Temperate/subpolar Oligotrophic (various; Canada) 0–5 ng GE literϪ1 Wa
Mesotrophic; Lake Zurich (depth and seasonal
¨ 2.7–23 ng GE literϪ1 19
differences)
Subtropical Eutrophic; Central Europe, shallow lake 600 ng GE literϪ1 45
Eutrophic; Lake Kasumigaura, Japan Up to 900 ng literϪ1 2-MIB and 700 ng literϪ1 GE 110
Various reservoirs in South Africa 150–3,170 ng GE literϪ1 106
Spatial/temporal Central Europe (eutrophic)
Oxic epilimnion 50 ng GE literϪ1 26
Anoxic hypolimnion 950 ng GE literϪ1 26
Winter turnover 3 ng GE literϪ1 26
Running water Australia (Carcoar Dam) 4,000 ng GE literϪ1 39
Canada/United States (St. Lawrence River) 2–40 ng 2-MIB literϪ1; 5–40 ng GE literϪ1 102
Central Europe (streams; Zurich, Switzerland)
¨ 3–7 ng GE literϪ1 (mostly dissolved) 43
Japan (Sakagawa River, polluted; Tokyo) 3,600 ng MIB literϪ1; 30 ng GE literϪ1 53
Mediterranean area (Llobregat River) 15–20 (200) ng GE literϪ1 97
Tropical Africa (Senegal River) 47 ng GE literϪ1 7
Dammed river (Ruhr River, Germany) 2-MIB (ϽMDL); 35 ng GE literϪ1 42
Biofilms Benthic cyanobacteria, aqueduct water Up to 78 ng 2-MIB literϪ1; 48 ng GE literϪ1 36
(California)
Attached biofilms (Tokyo, Japan) 100 ng GE mg (dry wt)Ϫ1 ϭ 6,300 ng GE cmϪ2 53
Canada (oligotrophic; N. Alberta streams) ϽMDL up to 18 ng GE cmϪ2 Wa
Floating biofilms (Spain) 1,000 ng GE mg (dry wt)Ϫ1 ϭ 36,500 ng GE cmϪ2 97
Aquatic GE concn from floating biofilms 10–100 ng GE literϪ1 8
Drinking water
Customer complaints United States 46–88 ng GE literϪ1 8
Canada (5) 10–120 ng GE literϪ1 Wa
Odor episodes France 2–10 ng GE or 2-MIB literϪ1 7
a
Chl a, chlorophyll a; MDL, minimum detection level.
b
Wa, S. B. Watson, unpublished data.
c
Values in parentheses represent single minimum or maximum values observed which were not included in the more typical range shown.
For example, up to 200-fold differences have been reported for enrichment such as found in sediment material and plant de-
strains of Streptomyces (46). Zaitlin et al. (114) found that bris. In a later study, Sugiura and coworkers (91) reported that
ϳ60% of 41 Lake Ontario isolates were producers, with ca. sedimented cyanobacteria and diatom cells (Microcystis aerugi-
100- and 300-fold variation in geosmin and 2-MIB production, nosa, Anabaena spiroides, and Synedra acus) also provided
respectively; these included both Streptomyces and nonstrepto- good substrates for VOC production by benthic streptomycete
mycete (i.e., nonhyphal) genera, but high production was seen isolates (we note here that in cases where this involved the
only among the former taxonomic group. mineralization of geosmin/2-MIB-producing cyanobacteria,
Not surprisingly, the growth and VOC production of an odor could originate from active streptomycete metabolism
individual strain also varies with the environment and, in many and/or the release of cell-bound VOCs from the decaying cyano-
cases, is not well supported in the pelagic zone. As early as bacteria cells [see below]). As a further significant complica-
1985, Wood and coworkers (107) demonstrated that natural tion, optimal conditions vary among taxa, and in some cases
reservoir water did not support geosmin production by Strep- even nutrient-poor environments can support VOC production
tomyces albidoflavus and other isolates but required a source of by some actinomycetes. For example, Zaitlin and coworkers
7. VOL. 73, 2007 MINIREVIEW 4401
(113, 114) observed considerable differences in the capacity to cyanobacteria, however, is that geosmin is constitutively pro-
produce geosmin and 2-MIB among three streptomycete and duced and its induction (as observed for streptomycetes) has
nonstreptomycete actinomycetes grown with enriched media yet to be conclusively shown.
or sterile/nonsterile (unenriched) river water, with one isolate From the above discussion, it is clear that the capacity for
showing equivalent production on agar and river water. Geos- geosmin and 2-MIB production is a complex phenomenon
min production has been induced in cultures of Streptomyces which varies considerably among and within different taxa.
tendae under stationary-phase conditions (as frequently found Thus, a simplistic approach to source tracking (for example by
when antibiotics are applied) (18). However, it has not yet measuring total cyanobacteria or actinomycetes in a water
been clarified whether growing or nongrowing streptomycetes body) is unlikely to succeed (see below). Both taxonomic
are more active geosmin producers under natural conditions. groups (and other potential VOC producers) show consider-
Cyanobacteria. Because of their link with poor water quality, able diversity in their biochemistry, morphology, and habitat,
the seasonal dynamics of cyanobacteria are monitored more and this should be carefully considered in any study. Above all,
frequently than those of actinomycetes in freshwaters, allowing in order to understand the fundamental drivers behind the
more opportunity for correlation analyses between these taxa variability in geosmin and 2-MIB production (as with any other
and volatile compounds such as geosmin. In contrast to the secondary metabolite) at the different organizational levels
case for actinomycetes, there is often a strong relationship (i.e., cell, species, population, and environment), the intrinsic
between these measures. For example, the seasonal concentra- molecular control mechanisms need to be fully characterized
tions of geosmin were well correlated with the abundance of in future work.
Aphanizomenon gracile in a eutrophic freshwater lake (45) and,
in another study of the Australian Hay Weir Dam and Carcoar INTRA- AND EXTRACELLULAR VOC FRACTIONS
Dam, with Anabaena (39).
Nevertheless, cyanobacteria can be as challenging and enig- As elucidated below, it is essential to recognize that geosmin
matic as actinomycetes. For example, between 1999 and 2006, and 2-MIB occur in surface waters as cellular (cell-bound) and
annual late summer peaks of geosmin in western Lake Ontario dissolved fractions and that the differentiation between these
(ranging between 5 and 200 ng ⅐ literϪ1) have shown little two fractions is key to the effective management of water
consistent relationship with the abundance of the large bundle- quality control and treatment. Apart from the treatment-re-
forming cyanobacterium Anabaena lemmermannii in the sur- lated issues, the dynamics of cell-bound and dissolved fractions
face waters, although this organism has been the only likely also have an important effect on the sensory assessment of
candidate source identified to date (101). Similarly, substantial odor (and hence any related drinking water monitoring tech-
geosmin peaks (up to 2,000 ng ⅐ literϪ1) in raw water in a niques) (71), because the bound VOC fraction does not follow
reservoir supplying the city of Tulsa, OK, have been poorly Henry’s law.
related to the abundance of the dominant planktonic cya- Unambiguous evidence for any organism can be obtained
nobacterium Anabaena circinalis (62) even though this partic- only by comparing cell counts to cell-bound VOC concentra-
ular taxon is known to be a major cause of taste and odor in tions. If the dissolved component, which can sometimes rep-
other source waters (87, 96). resent the majority, is not differentiated from the particulate
Even though they are often more visible, considerable ex- fraction, the correlation with biomass may be obscured. Fur-
pertise is required to identify cyanobacteria microscopically, a thermore, the proportions of intra- and extracellular produc-
factor that is often overlooked. Their taxonomy is continually tion cannot be assumed to be constant, as these vary among
evolving, as the traditional emphasis on morphological traits as taxa and with physiological state (growth phase and environ-
key criteria for positive classification is increasingly integrated mentally induced stress) (76) (Table 3).
with biochemical and molecular data. As a result, many species Intracellular dissolved and protein-bound geosmin and
(again we refer to the phylogenetic species concept, since 2-MIB. Work by Wu and Juttner (108, 109) demonstrated
¨
cyanobacteria are asexual [3]) identified as geosmin or 2-MIB clearly that particulate geosmin occurs in cyanobacterial cells
producers by early studies have since been renamed, leading to as two distinct intracellular fractions, one which is dissolved in
confusion among many workers (Table 2), particularly since the aqueous cytosol and a second which is bound to proteins.
there is considerable plasticity in the morphology of many Using polar solvents, these authors showed that this second
odor-producing (and non-odor-producing) cyanobacteria (27). geosmin fraction is bound to membrane proteins and not dis-
Similar to the case for actinomycetes, there are low- and high- solved in the aqueous cytosol, as is also seen with chlorophylls
VOC-producing strains of (apparently) the same cyanobacte- and carotenoids, which are integral to the macromolecular
rial species, for example, as seen for Calothrix parietina, Oscil- protein-pigment photosystem units. In fact, the phycobilin pro-
latoria limosa, Anabaena lemmermannii, and Fischerella (29; teins are attached to the surface of the thylakoids and may be
Juttner and Watson, unpublished data), which contributes to
¨ the macromolecules to which geosmin and 2-MIB are bound
the overall ambiguity, together with the fact that the morpho- by hydrogen bonds and van der Waals forces.
types and a large portion of the genotypes of producers and The presence of bound and dissolved intracellular geosmin
nonproducers may be the same. A further and very important fractions has important implications for protocols commonly
consideration is that some cyanobacterial species identified as employed for extraction and analysis, because these fractions
geosmin and/or 2-MIB producers may in fact not be the source behave differently. Stripping analysis using freeze-thaw, soni-
of these compounds. One of the essential steps in the identi- cation, grinding, or nearly saturated NaCl (20%, wt/vol) to
fication of a producer is the verification of VOC production by disrupt cells (e.g., as with the increasingly popular headspace
isolated strains of the study organism. A positive feature of all solid-phase microextraction technique) primarily determines
8. 4402 MINIREVIEW APPL. ENVIRON. MICROBIOL.
cytosol-solubilized geosmin. The recovery of intracellular frac- means that reported cell densities of these bacteria in open-
tions may improve where these methods include heating, but water environments vary considerably among studies and likely
this needs to be carefully verified. In many cases it is likely that misrepresent the true levels of active cells (see above). How-
the proportion of protein-bound geosmin is underestimated by ever, it appears that most cells are largely bound to suspended
such techniques, since a suitable polar solvent is required to sediment particles (114). The contribution of their intracellular
cleave the bonding forces and access this fraction, which often fractions to particle-bound geosmin (and likely also 2-MIB)
represents the predominant geosmin moiety in a healthy cyano- may therefore be generally rather small but seasonally variable,
bacterial cell. In Fischerella muscicola, for example, separate for example, during storm events or periods of high runoff (37).
water- and solvent-based extractions and analyses showed that The occurrence of these different VOC fractions has impor-
82% of the geosmin was protein bound (109). In a typical tant implications for the interpretation of published data. Most
procedure, cells are filtered onto a glass fiber filter and treated workers continue to overlook the fundamental differences
briefly with methanol. Once separated, geosmin is not readily among cell-bound and dissolved geosmin and 2-MIB fractions,
again sorbed by the protein when water is added and can be even though much of this knowledge was available almost 20
easily stripped by a conventional method. As a nonpolar com- years ago, and a simple filtration step easily allows their sep-
pound, geosmin is lipophilic. The fact that treatment with aration and analysis (19). Thus, since there are a number of
water does not lead to the rebinding of this compound to different analytical procedures for geosmin and 2-MIB, in each
cellular constituents supports the premise that the lipid mem- case it is essential to know which method has been employed.
branes (thylakoids) themselves are not the primary binding Conversion of cell-bound to dissolved geosmin fractions.
sites for geosmin. Since the thylakoids are the most ubiquitous The presence of separate particulate and dissolved VOC fractions
and abundant components in the cell lipid phase, if they were in source waters has other important implications, both for the
the primary sites, much of the geosmin should again be bound interpretation of field data and for the choice of optimal water
to these structures after dilution of the aqueous phase. treatment processes (discussed below). As previously noted, the
On the other hand, considerable research is still required relative amounts of these fractions can vary among and within
to elucidate 2-MIB fractions in cyanobacteria. In a study of species, while cell-bound VOCs can be transferred rapidly into
pigments and intra- and extracellular 2-MIB synthesis rates the dissolved form. One major mechanism for this is via cell
in Oscillatoria perornata (syn. Planktothrix perornata) and degradation by heterotrophic microorganisms (which could in-
Pseudanabaena articulata, Zimba and coworkers (115) found clude both producers and nonproducers, e.g., fungi and strepto-
that the size of the intracellular 2-MIB pool was independent mycetes [90, 91]). This process, for example, liberates geosmin
of lipophilic and phycobilin pigment production. However, from the cyanobacterial cell protein matrix. Much of the cell-
since it is still unknown if, similar to the case for geosmin, there bound material can be transferred into the dissolved form by this
are two intracellular pools of 2-MIB, we recommend that the process because geosmin itself is much more slowly degraded by
two extraction methods described above also be applied for most bacteria than other cell components.
analysis of this terpenoid. This phenomenon is observed frequently in water layers near
The cellular pools of geosmin and 2-MIB in actinomycetes, the sediment, and the resulting elevated concentrations of dis-
which lack the extensive thylakoid membrane complex, have solved geosmin are readily visible in depth profiles (19). The
similarly not been examined. Combined evidence points to the VOC release takes place when geosmin-containing microorgan-
important effects of growth conditions on total VOC produc- isms sediment into deep oxic or anoxic waters and are mineralized
tion and its allocation to intra- versus extracellular fractions. In by one or more of several processes: the catalytic enzymes of both
a study of the growth, sporulation and geosmin production by the producers themselves and other microbial flora and, in some
Streptomyces tendae, Diogini et al. (18) observed that a large cases, benthic grazers (26, 29). In the pelagic zones of lakes,
fraction of geosmin was stored in the cells relative to that particularly the epilimnion, grazing may be a more important
released into the environment. This is consistent with what is liberating mechanism. Experiments with the geosmin-producing
exclusively observed with cyanobacteria. However, those au- cyanobacterium Aphanizomenon gracile showed that when grazed
thors also found that growth, sporulation, and geosmin pro- by the crustacean Simocephalus or Daphnia magna, the cell-
duction varied significantly among different agar growth media bound geosmin was almost completely transferred into the dis-
and that VOC yield was highest in sporulating cultures. This solved form (19). This process is typically overlooked by most
suggests that geosmin production is intensified either in these taste-odor studies and yet is likely to be a significant modifier in
propagules or in both these and the accompanying somatic many water bodies. Crustaceans can turn over a large portion of
cells. In contrast, Pollack and Berger grew S. citreus in a liquid the phytoplankton in short time periods, and thus it is likely that
broth media and showed that the majority of this compound relative proportions of dissolved and cell-bound geosmin in
was extracellular over much of the growth cycle (69). Those source waters are often related to grazing activity. 2-MIB may
authors did not examine the cultures for spore production. show similar patterns, although this is yet to be examined. Simi-
Both studies applied suitable extraction methods to recover larly, as noted below, the role of this VOC release mechanism in
cell-bound fractions, and taken together, their results indicate biofilms is unknown but is also likely to be significant.
that extra- versus intracellular production may vary according
to whether these organisms are suspended or on a substrate IN SITU AND ALLOCHTHONOUS PRODUCTION OF
(and that differences in sporulation may be the reason), which GEOSMIN AND 2-MIB
has implications for suspended versus sediment-associated
cells and treatment efficacy. The existence of major differences Many running waters investigated to date have contained
in streptomycete abundances estimated by different techniques geosmin (8, 41, 43), 2-MIB (31), or both odor compounds (36,
9. VOL. 73, 2007 MINIREVIEW 4403
97, 102) (Table 3). VOC concentrations can range consider- concentrations were reduced to ϳ50 ng ⅐ literϪ1, but at the
ably, and in these lotic systems the major fractions of both same time a substantial increase from ϳ190 to 950 ng
compounds are often in the dissolved form. For example, Jutt- ¨ geosmin ⅐ literϪ1 was observed in the hypolimnion. Maximum
ner (43) found 4 to 7 ng ⅐ literϪ1 geosmin in some minor levels were found at the 10-m depth just above the sediment.
streams near Zurich (Switzerland), with the particle-bound
¨ The total geosmin amount in the lake was nearly constant over
fraction being between 3.5 and 22.2% of the total. Hoson and that same 1-month observation period. Although cell-bound
coworkers also found that the dissolved 2-MIB fraction was geosmin was not determined at that time, the most likely cause
larger than the cell-bound fraction (32). In some cases, alloch- of these temporal and spatial patterns was the sedimentation
thonous soil runoff may be important (33, 113). Biofilms can of particle-bound geosmin. The organic seston fraction was
also be very significant sources, even in large, fast-flowing riv- readily digestible under anoxic conditions, but geosmin degra-
ers. For example, Watson and Ridal (102) concluded that most dation was very low under these same conditions, and most was
of the fairly significant levels of geosmin and 2-MIB (up to ϳ70 therefore transferred from the cell-bound into the water-solu-
ng ⅐ literϪ1) sustained during late summer every year in the ble fraction. It is also important to note here that to date,
Saint Lawrence River are produced by shoreline biofilms geosmin (or 2-MIB) production has not been described for
(cyanobacteria, actinomycetes, and others) on rocks, macro- anoxic environments.
phytes, and mussels. With a flow of ϳ8,000 m3 ⅐ sϪ1 of the Vertical transport caused by water or particle movements
river, this represents substantial in situ production. Vilalta and can be an effective vector of VOCs. For example, the extensive
Sabater (98) found a very strong correlation between geosmin transport of offshore particle-bound geosmin to deep-water
levels in the open water and those in attached and floating treatment plant intakes occurs each summer in Lake Ontario
cyanobacterial mats in the Llobregat River (Spain). Baker and as a result of large-scale wind-induced downwelling (70, 101).
coworkers (2) traced high 2-MIB levels in the Murray River to Detachment of benthic and epipelic VOC-producing cyano-
the proliferation of a toxic benthic mat of Phormidium. Under bacterial populations (e.g., Gloeotrichia echinulata and
normal growth conditions, cyanobacteria (5, 109) and strepto- Oscillatoria limosa) and their subsequent flotation can introduce
mycetes (18) excrete very little of these compounds into the these compounds into the pelagic zone (8, 98, 99). Gases that
medium, and in many flowing waters, their liberation into open accumulate in small bubbles in the sediment below cyanobac-
water from these attached or floating producers is likely caused terial mats can increase their buoyancy sufficiently to loosen
by a combination of grazing and environmental stressors, such large biofilm patches, which then rise and transport cell-bound
as desiccation and photooxidation, that can lead to the disin- geosmin to the water surface (87). Such a mechanism would
tegration of these cells and release of cell contents during explain, for example, the observed surface maxima of bound
sloughing off or water level changes. In addition, the concerted geosmin in Lake Zurich (19).
¨
interaction of actinomycetes and cyanobacteria in biofilms
could contribute to VOC release in a different way than when PROACTIVE CONTROL OF GEOSMIN AND 2-MIB IN
these organisms act independently (90, 91). WATER SOURCES: TREATMENT REMOVAL AND
Alternatively, plankton may be primary sources of geosmin LONG-TERM MANAGEMENT
and 2-MIB in some slow-moving turbid rivers. For example,
this was observed in the Murrumbidgee River (Australia), Geosmin and 2-MIB are relatively stable to chemical (66,
where high geosmin levels were caused by the buoyancy-regu- 104) and biological degradation and can persist in the open
lating cyanobacterium Anabaena circinalis (5), and in the Yodo water in the dissolved form for some time. This is an important
River (Japan), where the stagnation of dammed river water factor to consider when attempting to understand and trace the
promoted the growth of geosmin-producing Anabaena mac- distribution, transport, and fate of these VOCs in aquatic sys-
rospora (28). Investigations of several other dammed rivers tems and their response to water treatment. Dissolved geosmin
have shown elevated geosmin concentrations near to the dam is slowly degraded by microorganisms in oxic freshwater (19),
(42), for example, in the Ruhr River (Westfalia, Germany), but little is known about the fate of this compound under
where this was most likely produced by the liberation of geos- anoxic conditions. Similarly, to our knowledge, little research
min from microorganisms undergoing accelerated sedimenta- has been carried out on natural 2-MIB degradation. Grazing
tion in the stagnant waters beside the dam. by crustaceans, the major herbivores in lakes and reservoirs,
Spatial distribution of geosmin and 2-MIB in lakes. In both does not appear to change the total amount of geosmin signif-
lotic and lentic systems, three zones should be investigated as icantly, as shown by Durrer and coworkers (19), who measured
possible sources of geosmin and 2-MIB: the epilimnetic water this process in closed vessels to prevent volatilization (which
and associated plankton; the hypolimnetic water (oxic or can be a major source of losses).
anoxic), which is often below the light compensation point for Most taste-and-odor outbreaks are unanticipated, and thus
oxygenic photoautotrophic microorganisms; and the littoral/ there is a heavy reliance on water treatment plants to control
benthic zone. Efficient transport of geosmin and 2-MIB among their impairment of drinking water. An extensive review of the
these compartments is mediated primarily by particles (cyano- treatment removal of geosmin and 2-MIB from raw water is
bacteria and other geosmin-producing microorganisms) that beyond the scope of this paper, which focuses on microbial
carry these odor compounds. As long as these VOCs remain processes. For overviews of the numerous chemical and pho-
cell-bound, sedimentation can introduce a rapid and efficient tooxidative techniques widely in use, the reader is referred to
displacement. Henatsch and Juttner (26) measured epilimnetic
¨ the numerous studies dealing with these processes and their
geosmin concentrations of up to 190 ng ⅐ literϪ1 in Lake effectiveness for different source waters (52, 54, 61, 77). These
Schleinsee (Germany) in July. By September, surface water techniques are generally combined with various filtration
10. 4404 MINIREVIEW APPL. ENVIRON. MICROBIOL.
media such as sand, activated carbon, and, more recently, tions about their biological and spatial origins and their storage
membrane systems (12, 34, 72). and release by cells. In particular, (i) it is often assumed that
Because of their stability, both compounds are difficult to planktonic or benthic aquatic cyanobacteria and streptomy-
oxidize with the conventional processes applied during water cetes are the major sources of these VOCs, while eukaryotes
purification (54). More advanced treatments, such as granular (e.g., fungi), and terrestrial and distribution system sources are
or particulate activated carbon, ozonation, and membrane fil- disregarded; (ii) discrete cell-bound and dissolved VOC frac-
tration, can be applied with variable success; their effectiveness tions respond very differently to treatment, and their relative
is modified by factors such as age of filter beds, type of carbon proportions have major implications for data interpretation,
used, levels of source water dissolved organic material, and yet these fractions are rarely considered and, furthermore, are
proportion of dissolved/particulate geosmin or MIB (12, 34). incompletely measured by most current analytical methods;
Because the bulk of the two compounds is often present in the (iii) key physical and biological processes (e.g., treatment,
particulate form, treatments such as the application of chem- grazing, and bacterial digestion) may interconvert these frac-
ical oxidants or algicides that disrupt cells and liberate the tions and thus affect source water quality and treatment, and
cell-bound material prior to their removal should be avoided yet the importance of these processes is rarely addressed; and
(67). Ideally, removal of intact particulate material should be (iv) problems associated with many of the methods currently
achieved (e.g., by dissolved air floatation, filtration, and sedi- used to identify and enumerate source biota may obscure any
mentation) prior to disinfection and other oxidative processes correlations with VOC levels and thus confound tracking ef-
(103). forts.
In comparison, the microbial treatment methods applied by Clearly, many intriguing questions still need to be addressed.
the water industry (river bank filtration and activated filter These include the spatial and temporal analysis of cell-bound
beds) are few in number (63), but some salient considerations and dissolved geosmin and 2-MIB; the molecular regulation of
are relevant to our discussion. In fact, microbial removal offers their production; the major physiological, biochemical, and
a potentially highly effective means to treat geosmin and molecular traits which determine which species/strains are low
2-MIB in source water, particularly when integrated with other and high odor producers; the physiological and ecological roles
treatment processes. For example, recent bench experiments (i.e., chemical ecology) of these compounds; and the mecha-
with granular carbon (20) and sand columns (30) have dem- nisms which trigger their extracellular release (i.e., whether
onstrated active microbial degradation activity for these odor this occurs primarily as a result of cell disruption and decay or
compounds under defined conditions. River bank filtration and via a transporter that is activated/induced under certain con-
slow sand filtration have been used in treatment facilities ditions). Future research into these and other related issues
throughout Europe for some time and offer a very effective will likely provide insight into much of the current ambiguity
means to obtain high elimination rates. Juttner (42), for exam-
¨ surrounding many outbreaks of these major odor compounds.
ple, reported that a slow sand filtration unit (flow rate of 420
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