Key lecture for the EURO-BASIN Training Workshop on Introduction to Statistical Modelling for Habitat Model Development, 26-28 Oct, AZTI-Tecnalia, Pasaia, Spain (www.euro-basin.eu)

1. Data Management and Integration
within EUROBASIN
Janine Felden & Stéphane Pesant
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

2. Who I am.......
• Master Marine Microbiology
• PhD: quantification benthic biogeochemical processes and in situ
flux measurements in cold seep ecosystems (chemosynthetic
environments)
• PostDoc:
– data manager in the EU Project HERMIONE (Hotspot Ecosystem Research and Man's
Impact On European Seas) & benthic activity of arctic deep sea sediment
• NOW: data curator in EUROBASIN (WP1)
– to support project partners during data submission and mining to and
from PANGAEA
© MARUM, Bremen
Data Management & Integration – Janine Felden © MARUM, Bremen
© MARUM, Bremen
Statistical Modeling Workshop, 26. – 28.10.2011
© MARUM, Bremen

3. EUROBASIN WP 1 Objectives:
• Develop methods to consolidate and integrate long‐term
observations from European and international databases
• Assemble historical data, new field observations and
experimental results into comprehensive datasets for
modelling and prediction of the Atlantic Ocean ecosystem and
related services.
work with PANGAEA as database
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

4. ©http://libraryjumpers.webs.com/
What is PANGAEA?
(...is a data library for earth system research.) Rijksmuseum Research
Library, Amsterdam
Data are stored georeferenced in space and time in a relational
database and a tape archive.
The data content is accessible on the Internet via a search engine,
a data warehouse and web services.
The system is open to any scientist or project to archive and
publish data.
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

5. Data submission via
Online ticket system (JIRA Client):
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

6. Data Publication
PANGAEA provide
• free and Open Access or Restricted Access (password) to data,
according to data policy
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

7. Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

8. Data Publication
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

9. Data Publication
‐ PANGAEA provide‐
• free and Open Access or Restricted Access (password) to data,
according to data policy
• free and Open Access to metadata
• Persistent and web‐resolvable Digital Object Identifiers (DOI)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

10. Data Publication
‐ DOI Model ‐
• Each data point is fully citable with a persistent identifier (DOI)
• Cross‐reference with journal articles
• Pre‐publication, peer‐review process
• Thomson Reuters and Elsevier will soon launch Data Citation
Impact Factors based on data DOI
• Creative Commons Attribution license which requires that
datasets are cited when data are used & re‐used
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

11. Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

12. Data Publication
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

13. PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

14. PANGAEA Search
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

15. PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
• Data Warehouse for mass extraction (EuroBASIN partners)
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

16. Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

17. Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

18. Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

19. Data Warehouse
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

20. PANGAEA Data Mining
• Google‐like & advanced metadata discovery (public)
• Data Warehouse for mass extraction (EuroBASIN partners)
• Web‐services linking data publications and journal
publications, e.g. Elsevier, Copernicus, AGU and Springer
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

21. Link to publisher
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011

22. Sum up
• PANGAEA offers various tools and support for data submission
and data mining
• PANGAEA data publications provide benefits for the authors
and scientific community (e.g.DOI, permanent data storage)
 ! PANGAEA data quantity & quality depends on the
data that are provided by the scientist !
Thus:
• support the work of EUROBASIN WP1!
• for any data work including worries and ideas contact us
(Stéphane Pesant (spesant@marum.de) or me (jfelden@mpi‐bremen.de))
Data Management & Integration – Janine Felden Statistical Modeling Workshop, 26. – 28.10.2011