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DEMETER – ERKEP and Current Status of the ERKEP Concept Note

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Matthias Filter & Michal Czyz from BfR on the DEMETER - ERKEP and Current Status of the ERKEP Concept Note.

Joint Workshop on Food Risk Assessment Research & Practice
24th November 2017, Wageningen University & Research, Netherlands

Published in: Food
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DEMETER – ERKEP and Current Status of the ERKEP Concept Note

  1. 1. GERMANFEDERALINSTITUTE FORRISKASSESSMENT DEMETER – ERKEP and Current Status of the ERKEP Concept Note Michal Czyz and Matthias Filter
  2. 2. DEMETER WP4 objective Develop collaborative Emerging Risk Knowledge Exchange Platform (ERKEP) supporting current EFSA procedures for emerging risks identification based on KNIME Server infrastructure To allow EU Member State authorities and EFSA to share knowledge, data and methods for the identification of emerging food-related îssues in a rapid and effective manner 2 ERKEP long term vision => ERKEP Concept Note Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  3. 3. ERKEP Concept Note Status Concept note brainstorming: started Terminology clarification: started Feature collection: started Constrains collection: started 3Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  4. 4. ERKEP Concept Note - feature list Communication: • supporting both group and `person to person` communication including communication history • simultaneous online editing • possibility to add 3rd party add-ons/plugins to easily broaden functionality when needed • video-conferencing • accessible from desktop app/mobile app, which allows for constant contact System administration: • user rights management 4Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  5. 5. ERKEP Concept Note - feature list Project management: • support time management for projects and project team, e.g. via Gantt Charts • support project workflow design, e.g. via ticket system (which will have option to be based on Kanban methodology). • control tasks completion and deadlines • support Stakeholder involvement in general • support multistage tasks, i.e. allow division of tasks into stages with different TM and St involved 5Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  6. 6. ERKEP Concept Note - feature list Data management system • quickly share links, files, pictures according to projects (linked to user management system) • version control of documents (full document tracing: who, when, what, why) • search, sort and filter function for documents • option to publish dedicated reports / documents to St or the public 6Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  7. 7. ERKEP Concept Note - feature list Knowledge management system • Glossary • Information resource inventory • Links to data sources, data services: • Data analysis and data mining workflows – KNIME based workflows, e.g. SiLeBAT NewsRadar – Generalized Morphological Analysis – Bayesian methods • Software inventory • Code snippets, scripts including sample input files for execution of code snippets • Model inventory • Data inventory – internal data collected and stored by EREN or ERKEP 7Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  8. 8. ERKEP Concept Note - feature list Other: • Emerging Risk NewsFeed (e.g. RSS): provide on daily basis information from web sites straight into ERKEP or to the St. In case of outbreak frequency of newsfeeding might be set higher. • Graph Maker – quick, high quality graphs and charts (possibly interactive) to place it in the reports or directly communicate it to other platform users (GP also?). • Reporting tool - to avoid problems with portability of document format types • Open access repository to public part of documents/report, workflows, models etc. • Tool to upload models, which after checking are included in repository 8Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  9. 9. What is KNIME (Konstanz Information Miner)? - free, open source data integration and analysis platform (www.knime.org ) - created and hosted by KNIME.com - first version released in 2006 - “scientific workflow management system” - community tool for data integration, transformation, modeling and visualization - strongly applied in pharmaceutical research (virtual drug design & cheminformatics) Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  10. 10. Node Description Workflow in use Workflows Nodes Results Charts / Views / Tables Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  11. 11. KNIME Server Power Users Administators Management BusinessUsers Workshop “Food Risk Assessment Research & Practice”, 24.11.2017, Wageningen
  12. 12. GERMANFEDERALINSTITUTE FORRISKASSESSMENT Thank you for your attention Matthias Filter German Federal Institute for Risk Assessment Max-Dohrn-Str. 8-10  10589 Berlin, GERMANY Phone +49 30 - 184 12 - 2209  Fax +49 30 - 184 12 - 47 41 matthias.filter@bfr.bund.de  www.bfr.bund.de/en

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