The BioSharing portal - linking databases, data standards and policies in the...Peter McQuilton
A 15 minute presentation for the Interest Group on Agricultural Data (IGAD) RDA pre-meeting meeting. Presented in Barcelona (ES) on Monday 3rd April, 2017.
As part of a webinar series on Open Research in Ireland, the National Open Research Forum (NORF) presented a webinar focused on Infrastructures to support Open Research on 30 March 2021. This presentation on the European Open Science Cloud (EOSC) was delivered by Sarah Jones (GÉANT).
The BioSharing portal - linking databases, data standards and policies in the...Peter McQuilton
A 15 minute presentation for the Interest Group on Agricultural Data (IGAD) RDA pre-meeting meeting. Presented in Barcelona (ES) on Monday 3rd April, 2017.
As part of a webinar series on Open Research in Ireland, the National Open Research Forum (NORF) presented a webinar focused on Infrastructures to support Open Research on 30 March 2021. This presentation on the European Open Science Cloud (EOSC) was delivered by Sarah Jones (GÉANT).
In this webinar, we look at how you obtain and use open data, the key role of search engines and how you establish rust in the data you find. The webinar will also look at the quality of data and how to clean and prepare data for analysis. Finally, the session will look at how you can quickly visualise cleaned data and the applications of this in the agriculture sector.
BioSharing, an ELIXIR Interoperability Platform resourcePeter McQuilton
A 20 minute presentation given at the 9th RDA Plenary in Barcelona as part of the BioSharing WG - ELIXIR Bridging Force IG session. This presentation covers the basics of what BioSharing is, who it's for, and how it captures and connects information on data standards, databases and data policies from the life, biomedical and environmental sciences.
Presentation at
CODESRIA-UNESCO –CLACSO Panel: Strengthening Scholarly Community Led open access publishing in the Global South
CODESRIA Conference on Electronic Publishing and Dissemination
CODESRIA-Council for the Development of Social Science Research in Africa
Dakar, Senegal, March 31st., 2016
Presentation by CLACSO, academic network of 616 social science research institutions in 47 countries, at OAI10 (CERN-UNIGE, Geneva, 21-23 June 2017), about the world landscape of repositories and regional repositories networks, its achievements and challenges, and the importance of open access being managed as a commons by the scholarly community
CLACSO´s invited presentation, by Dr.Pablo Vommaro (CLACSO-University of Buenos Aires UBA), at UNESCO NGO´s International Conference of Non-Governmental Organizations. Paris, UNESCO, 12-14 December 2016
A 10 minute presentation given at the RDA UK meeting in London (Jan 2019). This presentation covers FAIRsharing work as part of the RDA/Force11 FAIRsharing WG.
Performances, preservation and policy implications: digital curation and pres...L Molloy
Laura Molloy: 'Performances, preservation and policy implications: digital curation and preservation awareness and strategy in the performing arts'. Presentation to the Digital Preservation for the Arts, Social Sciences and Humanities (DPASSH) conference, Dublin, Eire, 26 June 2015.
Please contact laura.molloy AT glasgow.ac.uk for further information on the study described.
What is GODAN? Network, Action & SecretariatgodanSec
An introduction to the Global Open Data for Agriculture and Nutrition (GODAN) initiative, its principles and what it does to advocate and develop capacity in the sector. The session will visit some definitions of open data.
Through examining the work of the network’s facilitation mechanism (the Secretariat), and its research and capacity building and research unit (GODAN Action) we will outline some of the experiences and challenges GODAN has had in communicating the value of open data in the sector.
For more information on the GODAN Acton e-learning course, visit the GODAN Action website here: http://www.godan.info/pages/open-data-management-agriculture-and-nutrition
All Presentation Slides
COUNTRY WORKSHOP
The Knowledge Lab on Climate Resilient Food Systems: An analytical support facility to achieve the SDGs
Co-Organized by IFPRI and AGRA
FEB 7, 2019 - 08:30 AM TO 05:55 PM EAT
In this webinar, we look at how you obtain and use open data, the key role of search engines and how you establish rust in the data you find. The webinar will also look at the quality of data and how to clean and prepare data for analysis. Finally, the session will look at how you can quickly visualise cleaned data and the applications of this in the agriculture sector.
BioSharing, an ELIXIR Interoperability Platform resourcePeter McQuilton
A 20 minute presentation given at the 9th RDA Plenary in Barcelona as part of the BioSharing WG - ELIXIR Bridging Force IG session. This presentation covers the basics of what BioSharing is, who it's for, and how it captures and connects information on data standards, databases and data policies from the life, biomedical and environmental sciences.
Presentation at
CODESRIA-UNESCO –CLACSO Panel: Strengthening Scholarly Community Led open access publishing in the Global South
CODESRIA Conference on Electronic Publishing and Dissemination
CODESRIA-Council for the Development of Social Science Research in Africa
Dakar, Senegal, March 31st., 2016
Presentation by CLACSO, academic network of 616 social science research institutions in 47 countries, at OAI10 (CERN-UNIGE, Geneva, 21-23 June 2017), about the world landscape of repositories and regional repositories networks, its achievements and challenges, and the importance of open access being managed as a commons by the scholarly community
CLACSO´s invited presentation, by Dr.Pablo Vommaro (CLACSO-University of Buenos Aires UBA), at UNESCO NGO´s International Conference of Non-Governmental Organizations. Paris, UNESCO, 12-14 December 2016
A 10 minute presentation given at the RDA UK meeting in London (Jan 2019). This presentation covers FAIRsharing work as part of the RDA/Force11 FAIRsharing WG.
Performances, preservation and policy implications: digital curation and pres...L Molloy
Laura Molloy: 'Performances, preservation and policy implications: digital curation and preservation awareness and strategy in the performing arts'. Presentation to the Digital Preservation for the Arts, Social Sciences and Humanities (DPASSH) conference, Dublin, Eire, 26 June 2015.
Please contact laura.molloy AT glasgow.ac.uk for further information on the study described.
What is GODAN? Network, Action & SecretariatgodanSec
An introduction to the Global Open Data for Agriculture and Nutrition (GODAN) initiative, its principles and what it does to advocate and develop capacity in the sector. The session will visit some definitions of open data.
Through examining the work of the network’s facilitation mechanism (the Secretariat), and its research and capacity building and research unit (GODAN Action) we will outline some of the experiences and challenges GODAN has had in communicating the value of open data in the sector.
For more information on the GODAN Acton e-learning course, visit the GODAN Action website here: http://www.godan.info/pages/open-data-management-agriculture-and-nutrition
All Presentation Slides
COUNTRY WORKSHOP
The Knowledge Lab on Climate Resilient Food Systems: An analytical support facility to achieve the SDGs
Co-Organized by IFPRI and AGRA
FEB 7, 2019 - 08:30 AM TO 05:55 PM EAT
Presented at the 10th European International Farming Systems Association (IFSA) Symposium, 1-4 July 2012 in Aarhus, Denmark.
Ingram, J, Mills, J, Frelih-Larsen, A and Davis, M. (2012). Uptake of soil management practices and experiences with decisions support tools: Analysis of the consultation with the farming community. Deliverable 5.1 http://smartsoil.eu/fileadmin/www.smartsoil.eu/WP5/D5_1_Final.pdf
SmartSOIL Aims to contribute to reversing the current degradation trend of European agricultural soils by improving soil carbon management in European arable and mixed farming systems covering intensive to low-input and organic farming systems.
Two overall aims:
To identify farming systems and agronomic practices that result in an optimized balance between crop productivity and soil carbon sequestration.
To develop and deliver a decision support tool (DST) and guidelines to support novel approaches to different European soils and categories of beneficiaries (farmers, farm advisory and extension services, and policy makers).
This presentation relates to the second of these aims
Transparent monitoring in practice: Supporting post-Paris land use sector mit...CIFOR-ICRAF
Presented by Stibniati Atmadja, Manuel Boissière, Niki De Sy, Robert Masolele, at "Scoping Workshop: Towards the Enhanced Transparency Framework for REDD+ MRV", ILRI, Addis Ababa, Ethiopia, 30 July 2021
GO FAIR Food Systems Implementation Networkbenschp
Presentation of the newly approved GO FAIR Food Systems Implementation Network (IN) Manifesto at the IGAD premeeting at the 13th RDA Plenary in Philadelphia
Presentation at the 5th Global Science Conference on Climate-Smart Agriculture.
Title: Designing climate knowledge networks to link research with agricultural professionals and producers for timely action
Speaker: Caitlin Corner-Dolloff
Presented by Christophe Besacier and Robin Chazdon during Enhancing restoration capacities in African drylands: A decade for action session of GLF Africa
Turning FAIR into Reality: Final outcomes from the European Commission FAIR D...Sarah Jones
A multi-speaker presentation given by the European Commission FAIR Data Expert Group at ScieDataCon as part of International Data Week in Botswana in November 2018.
Simon Hodson, Chair of the Group explained the remit and background. Natalie Harrower outlined key concepts. Francoise Genova spoke on the recommendations related to research data culture. Daniel Mietchen addressed the infrastructure needed and our proposals for a FAIR ecosystem, and Sarah Jones spoke to the cultural aspects needed to drive change and outlined the FAIR Action Plan.
The report has been revised in light of the 500+ comments received as part of the open consultation and will be formally released on 23rd November as part of the Austrian Presidency events.
Making Data FAIR (Findable, Accessible, Interoperable, Reusable)Tom Plasterer
What to do About FAIR…
In the experience of most pharma professionals, FAIR remains fairly abstract, bordering on inconclusive. This session will outline specific case studies – real problems with real data, and address opportunities and real concerns.
·
Why making data Findable, Actionable, Interoperable and Reusable is important.
Talk presented at the Data Driven Drug Development (D4) conference on March 20th, 2019.
Similar to IGAD Discussion Group 5: Soil Data (20)
The IMLS-funded project Linked Data for Professional Education (LD4PE) has created a "Competency Index for Linked Data".
The Index provides a concise and readable map of concepts and skills related to the practices and technologies of Linked Data for the benefit of interested learners and their teachers.
The Research Data Alliance (RDA) has developed a Catalogue of Metadata standards and tools aimed at researchers and those who support them. In its new version, the Metadata Standards Catalog will provide much greater detail about metadata standards and tools, and through its new API - it will be usable within other applications. It will also provide a platform for furthering the work of the RDA Metadata Interest Group, which is seeking to improve the interoperability of metadata in different standards by working towards semi-automatically generated converters.
The International Treaty on Plant Genetic Resources for Food and Agriculture (ITPGRFA) calls for the contribution of non confidential information about the Plant Genetic Resources for Food and Agriculture (PGRFA) to the Global Information System (GLIS) to facilitate access to such information by any party interested. The foundation of GLIS is the accurate identification of the PGRFA to which the information is associated. After extensive research and consultation, DOIs have been selected as the Permanent Unique Identifier of choice for GLIS.
The webinar describes the challenges that the GLIS team of the ITPGRFA has faced as well as the benefits that the GLIS user community will receive by the adoption of DOIs.
Initially developed by FAO of the UN in the context of the NeOn project as a collaborative environment for the development of the AGROVOC thesaurus, later generalized to a SKOS-XLdevelopment platform in the context of a collaboration with the University of Rome Tor Vergata, VocBench is now reaching its third incarnation.
VocBench 3 (or simply, VB3), is the new version of VocBench, funded by the European Commission ISA² programme, and with development managed by the Publications Office of the EU, under contract 10632 (Infeurope S.A.).
VB3 will offer a powerful editing environment, with facilities for collaborative management of OWL ontologies and SKOS/SKOS-XL thesauri. VB3 will surpass its predecessor with native support for OWL, SKOS and SKOS-XL, completely rewritten components for better User Interface, User Management, History Tracking and Validation&Publication Workflow.
Research activities rely on access and repeatability of results. Accurate identification of the subject of the research as well as of the techniques and methods used is critical to obtain reliable results.
The adoption of Permanent Unique Identifiers, and specifically Digital Object Identifiers (DOIs)promotes access and reusability of data in modern research. The webinar begins with some basic concepts on Permanent Unique Identifiers. Next, DOIs are introduced describing how they are managed, how they can be obtained and how their features can be of benefit to researchers in a wide range of fields.
The FAIR principles have been introduced as a guideline for good scientific data stewardship. They have gained momentum at a management level and are now for example part of the project template for EU Horizon 2020 projects. This raises the question what research groups and projects can do to implement them. Hugo Besemer will introduce the ideas behind the FAIR principles.
By Ignasi Labastida is the Head of the Office the Dissemination of Knowledge at the Universitat de Barcelona
25 April 2017- 14:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
In 2006 the University of Barcelona launched the Office for the Dissemination of Knowledge (ODK) in order to make visible its commitment with openness started in 2003 when it joined Creative Commons as its host institution in Spain. Currently the ODK is based in the library and during these ten years has been involved in many activities, events, project and trainings to foster openness in any academic level from education to research. In this webinar, Dr. Labastida will explain how they have been developing this work and how the community has reacted.
By Sander Janssen, Research Team Leader of Earth Observation and Environmental Informatics at Alterra, Wageningen UR,
12 April 2017- 14:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
This presentation focus on the political context of open data publishing, methodological frameworks for estimating the impacts of open data and highlight the Open Data Journal for Agricultural Research as publication channel for open data sets. It will also build on personal reflections on publishing open data from Dr. Janssen’s own research career.
For more on the topic: http://aims.fao.org/activity/blog/join-free-webinar-publishing-open-data-agricultural-research
By Jennifer Chapin, Programme Manager, AuthorAID at INASP.
1 March 2017- 15:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
This webinar will provide an overview of the AuthorAID website and programme of support, including the online courses in research writing, mentoring support and resources. The impact of the AuthorAID programme and the lessons learnt in low income countries will also be covered.
About Jennifer Chapin
Jennifer coordinates the communication of research at INASP, managing the AuthorAID programme to support the capacity of researchers in developing countries. Joining INASP in 2016, Jennifer spent the previous four years at the Institute and Faculty of Actuaries in London, a role which included developing research best practice and quality assurance, supporting the development of actuarial research with 300 researchers worldwide. Holding an MA in Education and International Development, she previously worked in education strategy for the Royal College of Physicians of Canada and, since 2010, has also acted as director of a gender equality in education programme in Togo through a Canada-Togo partnership.
By Joy Paulson, the Director of the TEEAL Project and the International Projects Librarian at Mann Library, Cornell University.
24 February 2017- 15:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
TEEAL, The Essential Electronic Agricultural Library, is a database that provides access to peer-reviewed, research journals in Agriculture and related-sciences without the need for internet connectivity. Currently TEEAL provides access to 450 research journals. Additionally, TEEAL also begun to provide access to non-journal research material that can be difficult to find and access. The first collection is research sponsored by the Bill & Melinda Gates Foundation and its partners and grantees.
TEEAL is delivered on a small-footprint computer that can be plugged into an institution’s local area network (LAN) or a stand-alone computer. When connected to an institution’s LAN, TEEAL is available across the institution to all members of the institutions community.
This webinar will introduce the TEEAL database, explore its collections, and demonstrate methods for browsing and effectively searching to identify the research the user needs. Eligibility for TEEAL and costs will also be discussed. There will be an opportunity for questions.
About Joy Paulson
Joy Paulson is the Director of the TEEAL Project and the International Projects Librarian at Mann Library, Cornell University. She has been the Director of TEEAL for over 5 years, and she has taught international workshops on using TEEAL and other electronic resources, information literacy, scientific writing, and digital project management Africa and South Asia. Her previous work focused on developing digital library collections.
By by Kristin Kolshus, Information Management Specialist at FAO of the United Nations.
22 February 2017- 14:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
The objective of this webinar is to provide an overview of the AGORA programme for interested institutions in eligible countries. AGORA is one of the four Research4Life programmes. The webinar will present AGORA, a programme to provide free or low cost access to major scientific journals in agriculture and related biological, environmental and social sciences to public institutions in developing countries. The webinar will focus on the eligibility, the registration, terms of use, and the types of resources covered.
About Kristin Kolshus
Kristin Kolshus is an Information Management Specialist at the Food and Agriculture Organization of the United Nations (FAO), Regional Office for Africa. She focuses on capacity development on access to scientific information, information management, and knowledge sharing, especially through AGORA and Research4Life.
By Thembani Malapela, Knowledge and Information Management Officer at FAO of the United Nations.
21 February 2017- 15:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
AGRIS is the International System for Agricultural Science and Technology. It is supported by a large community of data providers, partners and users. AGRIS is one of the many bibliographic databases used for locating agricultural information online, others examples include PubAg, TEEAL and CAB Abstracts.
AGRIS is a database that aggregates bibliographic data, and through this core data it retrieves related content across online information systems by taking advantage of Semantic Web capabilities. Through AGRIS core data, related content across online information systems is retrieved thereby enriching the search results.
This webinar will present the AGRIS international initiative and partnership, looking at how AGRIS bibliographic data acts as a gateway to enable researchers and policy makers to retrieve agricultural and scientific information. The end-user based webinar will explain the fundamentals of AGRIS, give an overview of the AGRIS interface, and show how users can initiate their searches using both the simple and advanced search functionalities.
About Thembani Malapela
Thembani Malapela works as Knowledge and Information Management Officer at the Food and Agriculture Organisation of the United Nations. Currently, he is responsible for AGRIS user support and communications and in evaluating various ways of improving the AGRIS user experience.
By Chenjerai Mabhiza, Head of User Services at the University of Namibia
17 February 2017- 15:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
By Thomas Ingraham, Publishing Editor at F1000Research
15 February 2017- 15:00 CET
--The webinar was held as part of ASIRA (Access to Scientific Information Resources in Agriculture) Online Course for Low-Income Countries--
This webinar covers three emerging themes in life science publishing, which will begin to influence the way in which the agricultural researchers share and access knowledge:
Faster dissemination: Publishing scientific articles is often a lengthy process, taking several months or even years from first submission. This prevents the research community and others from being able to act on new knowledge quickly, which is especially serious in emergency situations such as emerging infectious diseases. This webinar will cover two ways of tackling publication delays: preprint servers and post-publication peer review platforms.
Increased access & transparency: Open Access has helped remove access barriers to a vast body of scientific knowledge. Other important research outputs that have historically been difficult to access are starting to be published more frequently such as replications, data, code and referee reports.
Assessment of research: Researches are assessed by their publication record. Journal title and Impact Factor tend to be the default assessment criteria, though there is growing awareness of the disadvantages of these approaches, and alternative measures of quality and impact are gaining ground.
About Thomas Ingraham:
Tom is the Publishing Editor at F1000Research and has been involved with the publisher’s open science and editorial development since its inception in 2012. He manages several channels published on F1000Research, including those focussing on agriculture, and is the lead on several of the publisher’s open data-orientated projects.
Open access has been a positive force in scientific publishing. But the removal of paywalls and restrictive licencing are not the only issues that need to be tackled; unnecessary delays to publication, irreproducible findings, publication biases, and poor access to underlying data and code also need to be addressed. This is especially important in agriculture and nutrition research where quick, unrestricted access to knowledge is crucial to solving urgent issues including food security, biodiversity conservation, and emerging infectious diseases in crops and animals.
This webinar will cover how the novel approaches taken by the publication venue Open Knowledge in Agricultural Development (OKAD) and the publishing platform it is hosted on, F1000Research, are addressing these issues. OKAD publishes academic articles, posters and slide presentations involving open knowledge projects within all areas of agriculture, nutrition and agro-biodiversity. By using F1000Research’s post-publication peer review platform, OKAD ensures rapid access to research within days of submission. Experts are invited to peer review upon publication, and their signed peer review reports are published alongside the article. All articles and any associated data and code are made publically available.
AGRIS is the International System for Agricultural Science and Technology. It is supported by a large community of data providers, partners and users. AGRIS is a database that aggregates bibliographic data, and through this core data, related content across online information systems is retrieved by taking advantage of Semantic Web capabilities.
This webinar will present AGRIS international initiative and partnership in the usage of AGRIS bibliographic data as a gateway to enable researchers and policy makers to retrieve agricultural and scientific information. The end-user based webinar will explain the basic fundamentals of AGRIS, overview the AGRIS interface, and how users can initiate their searches using both the simple and advanced search functionalities.
Le programme Research4Life est un partenariat public-privé entre l’OMS, la FAO, le PNUE, l’OMPI, les Universités Cornell et Yale, des partenaires technologiques et plus de 200 éditeurs scientifiques représentés par l’Association internationale des éditeurs de la STM.
Le programme fournit aux pays à revenu plus faible et moyen, un accès gratuit ou à faible coût aux plus grandes collections de publications en ligne. Les bibliothèques admissibles au programme bénéficient de plus de 68 000 revues scientifiques internationales, livres et bases de données dans les domaines de la santé, de l’agriculture, de l’environnement et de la technologie.
L’objectif de Research4Life est de réduire l’écart des connaissances entre les pays industrialisés et les pays en développement.
Ce webinaire présente comment Research4Life fonctionne, comment le programme est structuré et qui peut se joindre au partenariat. Il donnera un aperçu de l’accès aux quatre programmes Hinari, AGORA, OARE et ARDI qui composent Research4Life.
De plus, il présentera brièvement la formation gratuite disponible sur les sites web sur les compétences des auteurs, les outils de gestion de référence mais aussi fournira des exemples de comment Research4Life fait la différence pour de nombreux établissements de recherche aujourd’hui.
With more and more thesauri, classifications and other knowledge organization systems being published as Linked Data using SKOS, the question arises how best to make them available on the web. While just publishing the Linked Data triples is possible using a number of RDF publishing tools, those tools are not very well suited for SKOS data, because they cannot support term-based searching and lookup.
This webinar presents Skosmos, an open source web-based SKOS vocabulary browser that uses a SPARQL endpoint as its backend. It can be used by e.g. libraries and archives as a publishing platform for controlled vocabularies such as thesauri, lightweight ontologies, classifications and authority files. The Finnish national thesaurus and ontology service Finto, operated by the National Library of Finland, is built using Skosmos.
Skosmos provides a multilingual user interface for browsing and searching the data and for visualizing concept hierarchies. The user interface has been developed by analyzing the results of repeated usability tests. All of the SKOS data is made available as Linked Data. A developer-friendly REST API is also available providing access for using vocabularies in other applications such as annotation systems.
We will describe what kind of infrastructure is necessary for Skosmos and how to set it up for your own SKOS data. We will also present examples where Skosmos is being used around the world.
Research4Life es una colaboración pública-privada de la Organización Mundial de la Salud (OMS), la FAO, el Programa de las Naciones Unidas para el Medio Ambiente (PNUMA), la Organización Mundial de la Propiedad Intelectual (OMPI), las bibliotecas de las universidades de Cornell y Yale, la Asociación Internacional STM y más de 200 editoriales internacionales. Brinda acceso libre o de bajo costo a contenido en línea revisado por pares académicos y profesionales en países en vías de desarrollo.
Instituciones elegibles y sus empleados y estudiantes tienes derecho a acceder a hasta 68,000 recursos de las principales revistas, bases de datos y del Internet en los ámbitos de la agricultura, las ciencias biológicas, medio ambientales y sociales relacionadas.
La meta de Research4Life es empoderar a instituciones científicas es países con bajos y medios ingresos y reducir las brechas en el conocimiento.
Este seminario mostrará el funcionamiento y la construcción de Research4Life, así como también quién puede participar en la colaboración. Presentará los cuatro programas de Research4Life: Hinari, AGORA, OARE y ARDI, que brindan acceso a los ámbitos mencionados. Además ofrecerá un resumen sobre capacitación proporcionada en la página web sobre competencias de la autoría, herramientas de la gestión de referencias etc. y proporcionará ejemplos de cómo Research4Life hace una diferencia para muchas instituciones científicas.
Research4Life is a public-private partnership of the WHO, FAO, UNEP, WIPO, Cornell and Yale Universities, the International Association of Scientific, Technical & Medical Publishers and over 200 international scientific publishers. It provides developing countries with free or low cost access to academic and professional peer-reviewed content online. Eligible libraries and their users benefit from online access to up to 68,000 peer-reviewed international scientific journals, books, and databases in the areas of health, agriculture, environment and technology.
The overall goal of Research4Life is to empower research institutions in developing countries and to reduce knowledge gaps.
This webinar will illustrate how Research4Life works, how it is constructed and who can join the partnership. It will briefly present the four Research4Life programs Hinari, AGORA, OARE and ARDI that provide access to the aforementioned research areas. Furthermore it will give an overview about free training provided on the website about authorship skills reference management tools etc. and provide examples of how Research4Life could make a difference for many research institutions already.
More from AIMS (Agricultural Information Management Standards) (20)
This presentation explores a brief idea about the structural and functional attributes of nucleotides, the structure and function of genetic materials along with the impact of UV rays and pH upon them.
Cancer cell metabolism: special Reference to Lactate PathwayAADYARAJPANDEY1
Normal Cell Metabolism:
Cellular respiration describes the series of steps that cells use to break down sugar and other chemicals to get the energy we need to function.
Energy is stored in the bonds of glucose and when glucose is broken down, much of that energy is released.
Cell utilize energy in the form of ATP.
The first step of respiration is called glycolysis. In a series of steps, glycolysis breaks glucose into two smaller molecules - a chemical called pyruvate. A small amount of ATP is formed during this process.
Most healthy cells continue the breakdown in a second process, called the Kreb's cycle. The Kreb's cycle allows cells to “burn” the pyruvates made in glycolysis to get more ATP.
The last step in the breakdown of glucose is called oxidative phosphorylation (Ox-Phos).
It takes place in specialized cell structures called mitochondria. This process produces a large amount of ATP. Importantly, cells need oxygen to complete oxidative phosphorylation.
If a cell completes only glycolysis, only 2 molecules of ATP are made per glucose. However, if the cell completes the entire respiration process (glycolysis - Kreb's - oxidative phosphorylation), about 36 molecules of ATP are created, giving it much more energy to use.
IN CANCER CELL:
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
Unlike healthy cells that "burn" the entire molecule of sugar to capture a large amount of energy as ATP, cancer cells are wasteful.
Cancer cells only partially break down sugar molecules. They overuse the first step of respiration, glycolysis. They frequently do not complete the second step, oxidative phosphorylation.
This results in only 2 molecules of ATP per each glucose molecule instead of the 36 or so ATPs healthy cells gain. As a result, cancer cells need to use a lot more sugar molecules to get enough energy to survive.
introduction to WARBERG PHENOMENA:
WARBURG EFFECT Usually, cancer cells are highly glycolytic (glucose addiction) and take up more glucose than do normal cells from outside.
Otto Heinrich Warburg (; 8 October 1883 – 1 August 1970) In 1931 was awarded the Nobel Prize in Physiology for his "discovery of the nature and mode of action of the respiratory enzyme.
WARNBURG EFFECT : cancer cells under aerobic (well-oxygenated) conditions to metabolize glucose to lactate (aerobic glycolysis) is known as the Warburg effect. Warburg made the observation that tumor slices consume glucose and secrete lactate at a higher rate than normal tissues.
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
Comparing Evolved Extractive Text Summary Scores of Bidirectional Encoder Rep...University of Maribor
Slides from:
11th International Conference on Electrical, Electronics and Computer Engineering (IcETRAN), Niš, 3-6 June 2024
Track: Artificial Intelligence
https://www.etran.rs/2024/en/home-english/
This pdf is about the Schizophrenia.
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Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
The ASGCT Annual Meeting was packed with exciting progress in the field advan...
IGAD Discussion Group 5: Soil Data
1. Group 5 members
Pandi Zdruli, Italy
Devika Madalli, India
Giovanni L’Abate, Italy
Daniel Martini, Germany
Nicolas Saby, France
Paola Tarocco, Italy
Peter Dahlhaus, Australia
Elizabeth Arnaud, France
Caterina Caracciolo, FAO
2. Who needs soil data?
Who are our clients?
Soil information is needed also for
validating subsidies to farmers
Private sector like insurance companies
(i.e. flood risk areas)
Research and education institutions
Environmental institutions
Even forensic experts
Renewable energy sector: solar or wind
Outcomes of Group 5: Soil
3. Precision agriculture
Fertilizer industry
Modeling experts (i.e. climate change)
The new Common Agriculture Policy (CAP)
in the EU place particular attention to green
economy and soil conservation
Public at large in response to increased
environmental awareness culture
Soil clients (con.t)
4. National and International
Global Soil Partnership Pillar 4:
Enhance the quantity and quality of soil data
and information: data collection (generation),
analysis, validation, reporting, monitoring and
integration with other disciplines
Institutional framework
5. • There is a great wealth of existing information on
soils at various levels
IUSS, FAO, USDA NRCS, ISRIC, IIASA, etc
• For missing data pedotransfer rules and functions
may be used
• Modelling is another trend in soil science
• Web soil information system is becoming the norm
in data distribution
• Private sector should distribute the data they have
on soils
What is available
6. •Strengthen partnerships
•Facilitate cooperation and processes for best utilization of Soil
Research Data at Global level
•Improve communication, dissemination and delivery
•Create standard metadata structures
•Promote global standards, harvest and or Harmonize data
collection
•Quality control quality assurance
•Improve data infrastructure operation and platforms
•Awareness, guidance and training
•Monitor success
•Land is a private property: how to overcome this handicap for
the societal use for soil data information and dissemination
Outcomes of Paris meeting
7. •Complexity of data collection and datasets
•Use common terminology
•Make use of extensive existing soil data and
share/distribute
•User friendly platforms
•Facilitate collaboration
•Interoperability between data holders and data users
•Web soil survey data distribution
•Endorse a professional culture for data sharing
Outcomes of Paris meeting (con.t)
8. WG5 suggest:
• There is interest to establish an “Interest Group on Soil” inside the
RDA
•Contact the Global Soil community through emails, listservs, blogs
etc to gather the interest in such an IG or WG
• Topics of discussion (data quality and interoperability and many
more to be suggested by the community)
• State of the art of data availability and gaps at various levels
• Expand and invite the soil science community to join the IG
•Links with existing soil communication entities (i.e. International
Panel on Soil of GSP)
•RDA should provide funding for attending meetings and/or
organizing workshops