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Comprehensive chromosomal screening at the 
blastocyst stage 
Dagan Wells, PhD, FRCPath 
dagan.wells@obs-gyn.ox.ac.uk
Limitations of conventional embryo screening techniques 
Cells are in interphase 
- use FISH 
Limited range of fluorochromes 
Less than half the chromosomes tested 
Spreading requires skill and can be inconsistent 
Mosaicism 
Poses a significant problem for diagnosis. 
However, most mosaic cleavage stage 
embryos are aneuploid in every cell. 
Cleavage stage biopsy may represent a cost to the 
embryo
Comparative genomic hybridization- CGH 
• Technique related to FISH 
• Allows the copy number of every chromosome to be determined 
Chromosome 15 
Test DNA Normal DNA 
Normal Trisomy Monosomy 
Gain 
Loss 
Normal 
Kallioniemi et al 1992; 
Wells et al 1999, 2002; Voullaire et al 1999; Wilton et al 2001; Gutierrez et al 2004, 2005; Fragouli et al 2006, 2007
Embryo screening using CGH 
Benefits 
• All chromosomes tested 
• DNA-based 
• No spreading of cells on slides 
But what about mosaicism and the impact of biopsy?
Comprehensive chromosome screening of blastocysts 
Trophectoderm biopsy- 
3-10 cells (mean 5) biopsied and tested 
Courtesy of M. Katz-Jaffe and J. Stevens, CCRM
Comprehensive chromosome screening of blastocysts 
Analysis of blastocyst stage 
• Biopsy of several cells is possible 
Diagnosis more robust and accurate 
Less risk of misdiagnosis due to mosaicism 
Reduced impact of embryo biopsy 
• Blastocyst cryopreservation (vitrification) necessary 
• Can overcoming the principal challenges to accurate screening 
allow PGS to fulfill the potential predicted by theory?
Blastocyst CGH- clinical results 
• 170 patients, mean age 38 years, 1-6 previous failed IVF cycles 
(mean 2) 
• Near 100% survival after biopsy, freeze and thaw 
• Pregnancy rate per cycle with transfer 87% 
• Birth rate per cycle with transfer 79% 
• Implantation rate per embryo 67% 
72% 
60% 
28% * 
Control group matched for: maternal age, day-3 FSH, day of transfer, # oocytes 
retrieved, # of failed cycles 
*p<0.0003 - Extremely promising for single embryo transfer
Blastocyst CGH- rates of pregnancy loss 
• Embryo loss rates are low 
• 91% of embryos that produced a fetal sac resulted in an 
ongoing third trimester pregnancy or live birth 
• 97% of embryos that produced a fetal heart beat resulted in an 
ongoing third trimester pregnancy or live birth 
• Expected pregnancy loss rate for IVF patients in this age 
range is ~25%
Blastocyst CGH- Pregnancy rates 
100 
90 
80 
70 
60 
50 
40 
30 
20 
10 
0 
30-34 35-38 39-42 43-50 
Positive pregnancy 
per transfer 
Positive pregnancy 
per cycle with biopsy 
Pregnancy rate per transfer shows only a small decline with advancing age 
Pregnancy rate per cycle shows a significant decline
Blastocyst CGH- aneuploidy and implantation rates 
Why does age still lead to reduced pregnancy rates despite aneuploidy 
screening? 
100 
90 
80 
70 
60 
50 
40 
30 
20 
10 
0 
30-34 35-38 39-42 43-50 
Implantation rate 
Aneuploidy rate 
Cycles with all embryos 
aneuploid
Conclusions 
• Pregnancy rates were above those typically achieved for all age 
groups. 
• However, pregnancy rates were lower for older patients due to 
the increased frequency of cycles with no euploid embryos. 
• Chromosomally normal embryos from older patients have a 
similar chance of producing a child as those derived from 
young patients. 
• Aneuploidy is likely to be the principal factor causing reduced 
IVF success with advancing maternal age 
• Spontaneous abortion rates were reduced for all patients, 
including those with a history of multiple miscarriage
Questions 
• Can the results obtained in the current study be replicated in a 
randomized controlled trial? 
• An RCT is currently underway 
• What patient groups will benefit the most from this type of 
screening? 
• Young patients may benefit, particularly in countries where 
single embryo transfer is mandatory
United Kingdom (Oxford) 
Elpida Fragouli 
Samer Alfarawati 
United States (Livingston, NJ) 
Pere Colls 
Tomas Escudero 
N-neka Esprit-Ngachou 
Jill Fischer 
Cristina Gutierrez-Mateo 
Santiago Munne 
Renata Prates 
Jorge Sanchez 
Sophia Tormasi 
John Zheng 
Colorado Center for 
Reproductive Medicine 
Mandy Katz-Jaffe 
Dagan.Wells@obs-gyn.ox.ac.uk 
John Stevens 
Bill Schoolcraft

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Daganasrm2009abstracto268 12564089438001-phpapp02 (1)

  • 1. Comprehensive chromosomal screening at the blastocyst stage Dagan Wells, PhD, FRCPath dagan.wells@obs-gyn.ox.ac.uk
  • 2. Limitations of conventional embryo screening techniques Cells are in interphase - use FISH Limited range of fluorochromes Less than half the chromosomes tested Spreading requires skill and can be inconsistent Mosaicism Poses a significant problem for diagnosis. However, most mosaic cleavage stage embryos are aneuploid in every cell. Cleavage stage biopsy may represent a cost to the embryo
  • 3. Comparative genomic hybridization- CGH • Technique related to FISH • Allows the copy number of every chromosome to be determined Chromosome 15 Test DNA Normal DNA Normal Trisomy Monosomy Gain Loss Normal Kallioniemi et al 1992; Wells et al 1999, 2002; Voullaire et al 1999; Wilton et al 2001; Gutierrez et al 2004, 2005; Fragouli et al 2006, 2007
  • 4. Embryo screening using CGH Benefits • All chromosomes tested • DNA-based • No spreading of cells on slides But what about mosaicism and the impact of biopsy?
  • 5. Comprehensive chromosome screening of blastocysts Trophectoderm biopsy- 3-10 cells (mean 5) biopsied and tested Courtesy of M. Katz-Jaffe and J. Stevens, CCRM
  • 6. Comprehensive chromosome screening of blastocysts Analysis of blastocyst stage • Biopsy of several cells is possible Diagnosis more robust and accurate Less risk of misdiagnosis due to mosaicism Reduced impact of embryo biopsy • Blastocyst cryopreservation (vitrification) necessary • Can overcoming the principal challenges to accurate screening allow PGS to fulfill the potential predicted by theory?
  • 7. Blastocyst CGH- clinical results • 170 patients, mean age 38 years, 1-6 previous failed IVF cycles (mean 2) • Near 100% survival after biopsy, freeze and thaw • Pregnancy rate per cycle with transfer 87% • Birth rate per cycle with transfer 79% • Implantation rate per embryo 67% 72% 60% 28% * Control group matched for: maternal age, day-3 FSH, day of transfer, # oocytes retrieved, # of failed cycles *p<0.0003 - Extremely promising for single embryo transfer
  • 8. Blastocyst CGH- rates of pregnancy loss • Embryo loss rates are low • 91% of embryos that produced a fetal sac resulted in an ongoing third trimester pregnancy or live birth • 97% of embryos that produced a fetal heart beat resulted in an ongoing third trimester pregnancy or live birth • Expected pregnancy loss rate for IVF patients in this age range is ~25%
  • 9. Blastocyst CGH- Pregnancy rates 100 90 80 70 60 50 40 30 20 10 0 30-34 35-38 39-42 43-50 Positive pregnancy per transfer Positive pregnancy per cycle with biopsy Pregnancy rate per transfer shows only a small decline with advancing age Pregnancy rate per cycle shows a significant decline
  • 10. Blastocyst CGH- aneuploidy and implantation rates Why does age still lead to reduced pregnancy rates despite aneuploidy screening? 100 90 80 70 60 50 40 30 20 10 0 30-34 35-38 39-42 43-50 Implantation rate Aneuploidy rate Cycles with all embryos aneuploid
  • 11. Conclusions • Pregnancy rates were above those typically achieved for all age groups. • However, pregnancy rates were lower for older patients due to the increased frequency of cycles with no euploid embryos. • Chromosomally normal embryos from older patients have a similar chance of producing a child as those derived from young patients. • Aneuploidy is likely to be the principal factor causing reduced IVF success with advancing maternal age • Spontaneous abortion rates were reduced for all patients, including those with a history of multiple miscarriage
  • 12. Questions • Can the results obtained in the current study be replicated in a randomized controlled trial? • An RCT is currently underway • What patient groups will benefit the most from this type of screening? • Young patients may benefit, particularly in countries where single embryo transfer is mandatory
  • 13. United Kingdom (Oxford) Elpida Fragouli Samer Alfarawati United States (Livingston, NJ) Pere Colls Tomas Escudero N-neka Esprit-Ngachou Jill Fischer Cristina Gutierrez-Mateo Santiago Munne Renata Prates Jorge Sanchez Sophia Tormasi John Zheng Colorado Center for Reproductive Medicine Mandy Katz-Jaffe Dagan.Wells@obs-gyn.ox.ac.uk John Stevens Bill Schoolcraft