This document presents a numerical effective medium approximation approach to efficiently calculate the phonon thermal conductivity of 2-D nanocomposites with randomly distributed inclusions. The approach modifies the bulk thermal conductivity of both the inclusions and host material. It also accounts for the thermal boundary resistance between materials. Results show the approach can capture the effects of inclusion size, shape, and distribution on thermal conductivity, with reasonable agreement to Boltzmann transport equation solutions. The numerical effective medium approximation provides a more general method compared to analytical models.