Schlumberger-Private
B47AD
Foundation Engineering B
Introduction to Bioprocessing for Chemical Engineers
© Heriot-Watt University 1
B47AD Oct 2016 v4
Schlumberger-Private
Introduction Lecture
• Senior HSE Advisor, Schlumberger Azerbaijan & Georgia
• Lecturer in FEB in BHOS since 2018
• Graduated with honours from Bachelor's & Masters Degree
• Certified trainer for
 Environmental Safety L2
 Hazardous Materials L2
 Injury Prevention
 Newcomers Training
 Spill Response Training
 Waste Management
• Qualification
 NEBOSH
 H2S Safety
 Firs Aid L2
 KCA Deutag Training Instructor L2
B47AD Oct 2016 v4 © Heriot-Watt University 2
What?
© Heriot-Watt University 3
Version Dec 2013
B47AD Oct 2016 v4
TAXONOMY
BIOCHEMISTRY
CELL BIOLOGY
MICROORGANISMS
CELL MEMBRANE
OSMOLARITY
ENZYMES
METABOLISM
BIOTECHNOLOGY/
BIOPROCESSING
How?
Coursework (45%)
Exam (55%)
Recommended reading:
Study Guide (on Vision)
The Cell: A molecular approach ; Cooper and Hausman; 6th Ed.
Biology; Campbell, Reece and Mitchell; 5th Ed.
Chemistry; Blackman, Bottle, Schmid, Mocerino, Wille, 2nd Ed.
Bioprocess Engineering Principles, Pauline M. Doran
© Heriot-Watt University 4
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
17 Lectures Weeks 1 - 12 Wednesday, 13.00-15.00
Tutorials Friday 13.00-15.00
6 Course work 45% of final mark
1 Final exam 55% of final mark
© Heriot-Watt University 5
B47AD Oct 2016 v4
How?
Schlumberger-Private
How is the course assessed?
55% final exam – past papers available in LMS
2 tutorials/workshops at the end of the course (exam format
questions to be attempted before the tutorial session) – serve as
revision classes
45% coursework
Set of questions after each subtopic (2-3 lectures)
6 subtopics so each set worth 7.5% of total mark
PEER MARKING (within small groups in a lecture; discuss answers)
© Heriot-Watt University 6
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
Our Expectations
At end of each lecture collect a handout for the next lecture (these will
also be available on Vision)
Outline the required pre-reading and pre-lecture questions, the aims of
the session and after lecture work
Lectures will include aspects of group work, questionnaires, tutorial style
working through questions
Expectations: DO THE READING AND QUESTIONS, ENGAGE WITH THE LECTURE
ACTIVITIES, PROFESSIONAL IN WORKING WITH OTHERS AND IN GIVING
FEEDBACK ON OTHERS WORK
© Heriot-Watt University 7
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
Your Expectations
© Heriot-Watt University 8
Version Dec 2013
B47AD Oct 2016 v4
In bioprocessing living organisms and components thereof are
used to manufacture useful products or solve problems
Bioprocessing
© Heriot-Watt University 9
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
PATHOGEN MONITORING – concentration, separation
and detection
MICROFLUIDIC SYSTEMS
B47AD Oct 2016 v4 © Heriot-Watt University 10
Why do we need to learn about it?
• Many chemicals are produced for biological effects (e.g. antibiotics
and pharmaceuticals).
• Many compounds are produced by biological agents
• Biological materials form a large proportion of industrial chemicals
(e.g. enzymes)
• For reasons of Sustainability – biological materials are renewable
resources
• For Environmental Reasons - toxicology, waste water treatment,
bioremediation
© Heriot-Watt University 11
Version Dec 2013
B47AD Oct 2016 v4
Products from bioprocessing
Treated wastewater
Products Proteins from mammalian cell culture
Vitamin B12
Penicillin
Baker’s yeast
Price per tonne (US$, 1993)
100,000,000
1,000,000
10,000
100
1
Complexity of bioprocessing
© Heriot-Watt University 12
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
Enabling Bioprospecting:
Solving Antibiotic Resistance
B47AD Oct 2016 v4 © Heriot-Watt University 13
Schlumberger-Private
Wastewater Treatment
B47AD Oct 2016 v4 © Heriot-Watt University 14
Schlumberger-Private
Food Production
B47AD Oct 2016 v4 © Heriot-Watt University 15
Schlumberger-Private
Food
Production
Water + Fat + Protein (Casein) +
Sugar (lactose)
DNA from dairy cows
Insert it into yeast
Culture the yeast in bioreactor
In a few days harvest the milk
Similar process to create artificial
meat
B47AD Oct 2016 v4 © Heriot-Watt University 16
Schlumberger-Private
Biomedical
B47AD Oct 2016 v4 © Heriot-Watt University 17
Schlumberger-Private
Bioremediation for marine oil spills can be approached in two different
ways depending on the case:
1) Biostimulation which involves adding supplemental nutrients to the
affected site to aid the existing oil degrading microorganisms.
2) Bioaugmentation which involves introducing oil degrading,
microorganisms to the affected site.
• type and concentration of oil
• climatic conditions
• conditions in the area
(waves, tides, currents)
• nutrient content (e.g., nitrogen,
phosphorus, and oxygen)
• pH of the water
Bioremediation
B47AD Oct 2016 v4 © Heriot-Watt University 18
Schlumberger-Private
http://www.ted.com/talks/magnus_larsson_turning_dunes_into_architecture.html
https://www.youtube.com/watch?v=PXMJobWlXks
B47AD Oct 2016 v4 © Heriot-Watt University 19
Bioprocessing
has a number of unique features
• Unity of life: all living organisms consist of cells
• All cells have a similar architecture, consist of similar molecules, use
similar manufacturing processes, and use similar instructions
• Cells are able reproduce themselves
• Cells respond to environmental changes
• Cells can grow on a variety of substances
• Production can be done under mild conditions(temperatures, pressures)
• Complex molecules can be produced with high precision and high
specificity
© Heriot-Watt University 20
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
• Scale up from lab processes to industrial size
• Delivery and even distribution of reagents
• Removal of waste products
• Purification techniques
• Substances and substrates which promote growth
• Maintaining optimum conditions throughout the process
© Heriot-Watt University 21
Version Dec 2013
B47AD Oct 2016 v4
BioprocessingChallenges:
Biology is the study of living systems
An organism is an individual living system (such as an animal, plant,
fungus, or micro-organism).
Some of the characteristics of living systems include:
•Presence of metabolism
•Reproduction
•Differentiation
•Sensing & communication
•Homeostasis- ability to keep conditions constant
(e.g. osmotic pressure)
•Movement
•Evolution
But not all living systems will have these characteristics!
© Heriot-Watt University 22
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
All living materials consist of cells
Cells Biology
© Heriot-Watt University 23
Version Dec 2013
B47AD Oct 2016 v4
Schlumberger-Private
© Heriot-Watt University 24
Version Dec 2013
Discovery of the cell (~1700)
Robert Hooke Image of cork drawn by
Hooke
Further investigations into cell structure had to wait until the
development of better microscopes
B47AD Oct 2016 v4
Schlumberger-Private
© Heriot-Watt University 25
Version Dec 2013
The seven points of the cell theory
1. All known living things are constituted of one or more cells.
2. All living cells arise from pre-existing cells by division.
3. The cell is the fundamental unit of structure and function in all living
organisms.
4. The activity of an organism depends on the total activity of
independent cells.
5. Metabolism and biochemistry occurs within cells.
6. Cells contain DNA which is found specifically in the chromosome and
RNA found in the cell nucleus and cytoplasm.
7. All cells are basically the same in chemical composition in organisms
of similar species.
B47AD Oct 2016 v4

B47AD Lecture 1 INTRODUCTION 2016.pptxgg

  • 1.
    Schlumberger-Private B47AD Foundation Engineering B Introductionto Bioprocessing for Chemical Engineers © Heriot-Watt University 1 B47AD Oct 2016 v4
  • 2.
    Schlumberger-Private Introduction Lecture • SeniorHSE Advisor, Schlumberger Azerbaijan & Georgia • Lecturer in FEB in BHOS since 2018 • Graduated with honours from Bachelor's & Masters Degree • Certified trainer for  Environmental Safety L2  Hazardous Materials L2  Injury Prevention  Newcomers Training  Spill Response Training  Waste Management • Qualification  NEBOSH  H2S Safety  Firs Aid L2  KCA Deutag Training Instructor L2 B47AD Oct 2016 v4 © Heriot-Watt University 2
  • 3.
    What? © Heriot-Watt University3 Version Dec 2013 B47AD Oct 2016 v4 TAXONOMY BIOCHEMISTRY CELL BIOLOGY MICROORGANISMS CELL MEMBRANE OSMOLARITY ENZYMES METABOLISM BIOTECHNOLOGY/ BIOPROCESSING
  • 4.
    How? Coursework (45%) Exam (55%) Recommendedreading: Study Guide (on Vision) The Cell: A molecular approach ; Cooper and Hausman; 6th Ed. Biology; Campbell, Reece and Mitchell; 5th Ed. Chemistry; Blackman, Bottle, Schmid, Mocerino, Wille, 2nd Ed. Bioprocess Engineering Principles, Pauline M. Doran © Heriot-Watt University 4 Version Dec 2013 B47AD Oct 2016 v4
  • 5.
    Schlumberger-Private 17 Lectures Weeks1 - 12 Wednesday, 13.00-15.00 Tutorials Friday 13.00-15.00 6 Course work 45% of final mark 1 Final exam 55% of final mark © Heriot-Watt University 5 B47AD Oct 2016 v4 How?
  • 6.
    Schlumberger-Private How is thecourse assessed? 55% final exam – past papers available in LMS 2 tutorials/workshops at the end of the course (exam format questions to be attempted before the tutorial session) – serve as revision classes 45% coursework Set of questions after each subtopic (2-3 lectures) 6 subtopics so each set worth 7.5% of total mark PEER MARKING (within small groups in a lecture; discuss answers) © Heriot-Watt University 6 Version Dec 2013 B47AD Oct 2016 v4
  • 7.
    Schlumberger-Private Our Expectations At endof each lecture collect a handout for the next lecture (these will also be available on Vision) Outline the required pre-reading and pre-lecture questions, the aims of the session and after lecture work Lectures will include aspects of group work, questionnaires, tutorial style working through questions Expectations: DO THE READING AND QUESTIONS, ENGAGE WITH THE LECTURE ACTIVITIES, PROFESSIONAL IN WORKING WITH OTHERS AND IN GIVING FEEDBACK ON OTHERS WORK © Heriot-Watt University 7 Version Dec 2013 B47AD Oct 2016 v4
  • 8.
    Schlumberger-Private Your Expectations © Heriot-WattUniversity 8 Version Dec 2013 B47AD Oct 2016 v4
  • 9.
    In bioprocessing livingorganisms and components thereof are used to manufacture useful products or solve problems Bioprocessing © Heriot-Watt University 9 Version Dec 2013 B47AD Oct 2016 v4
  • 10.
    Schlumberger-Private PATHOGEN MONITORING –concentration, separation and detection MICROFLUIDIC SYSTEMS B47AD Oct 2016 v4 © Heriot-Watt University 10
  • 11.
    Why do weneed to learn about it? • Many chemicals are produced for biological effects (e.g. antibiotics and pharmaceuticals). • Many compounds are produced by biological agents • Biological materials form a large proportion of industrial chemicals (e.g. enzymes) • For reasons of Sustainability – biological materials are renewable resources • For Environmental Reasons - toxicology, waste water treatment, bioremediation © Heriot-Watt University 11 Version Dec 2013 B47AD Oct 2016 v4
  • 12.
    Products from bioprocessing Treatedwastewater Products Proteins from mammalian cell culture Vitamin B12 Penicillin Baker’s yeast Price per tonne (US$, 1993) 100,000,000 1,000,000 10,000 100 1 Complexity of bioprocessing © Heriot-Watt University 12 Version Dec 2013 B47AD Oct 2016 v4
  • 13.
    Schlumberger-Private Enabling Bioprospecting: Solving AntibioticResistance B47AD Oct 2016 v4 © Heriot-Watt University 13
  • 14.
    Schlumberger-Private Wastewater Treatment B47AD Oct2016 v4 © Heriot-Watt University 14
  • 15.
    Schlumberger-Private Food Production B47AD Oct2016 v4 © Heriot-Watt University 15
  • 16.
    Schlumberger-Private Food Production Water + Fat+ Protein (Casein) + Sugar (lactose) DNA from dairy cows Insert it into yeast Culture the yeast in bioreactor In a few days harvest the milk Similar process to create artificial meat B47AD Oct 2016 v4 © Heriot-Watt University 16
  • 17.
    Schlumberger-Private Biomedical B47AD Oct 2016v4 © Heriot-Watt University 17
  • 18.
    Schlumberger-Private Bioremediation for marineoil spills can be approached in two different ways depending on the case: 1) Biostimulation which involves adding supplemental nutrients to the affected site to aid the existing oil degrading microorganisms. 2) Bioaugmentation which involves introducing oil degrading, microorganisms to the affected site. • type and concentration of oil • climatic conditions • conditions in the area (waves, tides, currents) • nutrient content (e.g., nitrogen, phosphorus, and oxygen) • pH of the water Bioremediation B47AD Oct 2016 v4 © Heriot-Watt University 18
  • 19.
  • 20.
    Bioprocessing has a numberof unique features • Unity of life: all living organisms consist of cells • All cells have a similar architecture, consist of similar molecules, use similar manufacturing processes, and use similar instructions • Cells are able reproduce themselves • Cells respond to environmental changes • Cells can grow on a variety of substances • Production can be done under mild conditions(temperatures, pressures) • Complex molecules can be produced with high precision and high specificity © Heriot-Watt University 20 Version Dec 2013 B47AD Oct 2016 v4
  • 21.
    Schlumberger-Private • Scale upfrom lab processes to industrial size • Delivery and even distribution of reagents • Removal of waste products • Purification techniques • Substances and substrates which promote growth • Maintaining optimum conditions throughout the process © Heriot-Watt University 21 Version Dec 2013 B47AD Oct 2016 v4 BioprocessingChallenges:
  • 22.
    Biology is thestudy of living systems An organism is an individual living system (such as an animal, plant, fungus, or micro-organism). Some of the characteristics of living systems include: •Presence of metabolism •Reproduction •Differentiation •Sensing & communication •Homeostasis- ability to keep conditions constant (e.g. osmotic pressure) •Movement •Evolution But not all living systems will have these characteristics! © Heriot-Watt University 22 Version Dec 2013 B47AD Oct 2016 v4
  • 23.
    Schlumberger-Private All living materialsconsist of cells Cells Biology © Heriot-Watt University 23 Version Dec 2013 B47AD Oct 2016 v4
  • 24.
    Schlumberger-Private © Heriot-Watt University24 Version Dec 2013 Discovery of the cell (~1700) Robert Hooke Image of cork drawn by Hooke Further investigations into cell structure had to wait until the development of better microscopes B47AD Oct 2016 v4
  • 25.
    Schlumberger-Private © Heriot-Watt University25 Version Dec 2013 The seven points of the cell theory 1. All known living things are constituted of one or more cells. 2. All living cells arise from pre-existing cells by division. 3. The cell is the fundamental unit of structure and function in all living organisms. 4. The activity of an organism depends on the total activity of independent cells. 5. Metabolism and biochemistry occurs within cells. 6. Cells contain DNA which is found specifically in the chromosome and RNA found in the cell nucleus and cytoplasm. 7. All cells are basically the same in chemical composition in organisms of similar species. B47AD Oct 2016 v4

Editor's Notes

  • #2 timin
  • #3 Topics, order and number of lectures – that the first 6 will be the examined coursework
  • #5 Update depending on my timings
  • #6 Change dates
  • #11 Moving away from oil towards other sources for chemicals, e.g. Conversion of cellulose and plant material using bioengineering strategies
  • #12 Stem cells and regenerative medicine markets worth US$8million/year and growing by 20% a year
  • #13 1% culturable – what does that mean? Different types of bacteria Bacteria produce antibiotics (compete with other bacteria) – sources of useful compounds Could be other useful chemicals produced by bacteria (if we could culture them) – bioengineering advances like this iChip essential Understand basic processes even in e.g. Fermentation (years to ferment all sorts of products e.g. Alcohol, enzymes etc) – recent seminar about trying to understand what bacteria are present and their processes
  • #17 Production of antibodies for example
  • #19 Roughly 6.15-8.30