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PET(Paired End di-tags)
PET
cDNA
cDNA 3 , 5



18bp



PET


PET


GIS – PET
CHIP – PET
MS-PET 
GIS-PET

fl-cDNA



GIS-PET 
GIS-PET
GIS full-length cDNA
(pGIS4)
biotinylated CapTrapper

GIS-PET



(flc-DNA)


GIS-PET
PET

PET

mRNA
Cap Trapper


cDNA mRNA
diol
5Me-dcTP

cDNA

GSU1

A








cDNA
cDNA

,TCCGAC
PET

cDNA
NOT1 

Mme1 
T4 


3
CDNA

Cap – Trapper

diol
mRNA cap
5Me-dcTP




STREPTAVIDIN
A

GSU1
CTGGAG
STEP1

AAAAAAAA
CTGGAG

STEP2

STEP3
T16

GCGGCCGC :GIS N5 GCGGCCGC:GIS N6
STEP5

NOT1
NOT1

M/B/S
STEP6
PGIS4
GIS-full length cDNAlibrary
TCCGAC

STEP7

Mme1

Mme1 digestion and end polish using T4 polymerase

AA
XX

NN

TT

20bp
Self-ligate , propagate in bacteria
Extract single- PET plasmid DNA
STEP8

18bp
GIS single PET library

AA

M/B/S
STEP9

release and purifry 50-bp PET
b

M
b

Concanate PETs into vectore
STEP10

GIS PET library
STEP11

Sequencing and mapping
GIS PETs to genome

Gen1

Gen2

Gen3
PET
transcriptome
Genome annotation







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