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Outbreak Investigation,
Response and Control
Dr. Amita kashyap
2 2
Definition of an outbreak
Occurrence of cases of an illness clearly in
excess of expected numbers
The occurrence of two or more
epidemiologically linked cases of a disease
of outbreak potential
(e.g., Measles, Cholera, Dengue, Japanese
encephalitis, or plague)
3 3
Outbreak and epidemic:
A question of scale
Outbreaks
Outbreaks are usually limited,
usually within one district or few blocks
Epidemics
An epidemic covers larger geographic areas
Epidemics usually linked to control
measures on a district/state wide basis
4
4
What does it Require?
A pathogen in sufficient quantities,
A mode of transmission,
And a pool of susceptible people
4
5 5
Sources of information
Rumour register
To be kept in standardized format in each
institution
Rumours need to be investigated
Community informants
Private and public sector
Media
Important source of information, not to neglect
Review of routine data
Triggers
6
6
Early warning signals for an outbreak
Clustering of cases or deaths
Increases in cases or deaths
Single case of disease of epidemic potential
Acute febrile illness of an unknown etiology
Two or more linked cases of epidemic
potential
Unusual isolate
Shifting in age distribution of cases
High vector density
Natural disasters
7 7
Why Investigate?
1. Verify and Recognize
the magnitude
2. Diagnose the agent
3. Identify the source
and mode of
transmission
4. Formulate prevention
and control measures
5. Public concerns
Host
Environment Agent
An outbreak comes from a change
in the way the host, the environment
and the agent interact:
This interaction needs to be understood
to propose recommendations
8
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0
10
20
30
40
50
60
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90
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Primary
Case
1st case
at HC
Report
to DMO
Lab
result
Samples
taken
Response
begins
DAY
CASES
Opportunity
for control!
Usual Sequence of events in outbreak
detection and confirmation (I)
9
9 9
Importance of timely action: The
first information report (Form C)
Filled by the reporting unit
Submitted to the District Surveillance
Officer as soon as the suspected outbreak
is verified
Sent by the fastest route of information
available
Telephone
Fax
E-mail
Epidemic preparedness
Formation & Training of RRT
Regular review of data
Alertness during known ‘outbreak season’
Identifying ‘outbreak prone areas’
Ensuring that these areas have necessary drugs
and materials (including transport media)
Identifying & strengthening the labs
Designating vehicles
Ensuring communication channels
11
11 11
The rapid response team
Composition
Epidemiologist, clinician and microbiologist
Gathered on ad hoc basis when needed
Role
Confirm and investigate outbreaks
Responsibility
Assist in the investigation and response
Primary responsibility rests with local health staff
12
12
Levels of response to different triggers
Trigger Significance Levels of response
1 Suspected /limited
outbreak
• Local response by health
worker and medical officer
2 Outbreak • Local and district response
by district surveillance
officer and rapid response
team
3 Confirmed outbreak • Local, district and state
4 Wide spread
epidemic
• State level response
5 Natural disaster • Local, district, state and
centre
13 13
The balance between investigation
and control while responding to an
outbreak
Source / transmission
Known Unknown
Etiology Known Control +++
Investigate +
Control +
Investigate +++
Unknown Control +++
Investigate
+++
Control +
Investigate +++
14
Steps of an outbreak
investigation -1/3
1. Establishing a probable diagnosis
2. Confirmation of the existence of
outbreak
3. Define population at risk
4. Search for all cases – RRT (Interim
report by RRT within one week
Steps of an outbreak
investigation Actions-2/3
5. Management of cases, and
Monitoring the situation
6. Environmental and
Entomological studies
8. Laboratory studies
10. Implementation of control and
preventive measures
11. Data analysis & interpretation
CONTD.....
Steps of an outbreak
investigation Actions-3/3
12. Formulation of hypothesis
13. Testing of hypothesis
14. Declaring the outbreak to be over
15. Final report & its Review within 10
days of the outbreak declared to be over
16. Documentation
a. Report
b. Publication
Unusual
Health Event
No
Yes
Is this an
outbreak
Etiology, Source
& Transmission
known?
No
Yes
Institute control
measures
Further Investigation
Describe outbreak
in terms of TPP
Continued….
Develop Hypothesis regarding
Source, Transmission, Etiology & PAR
yes No
Does the
Hypothesis
Fit with facts
Institute control
measures
Special studies
Remember that outbreak is usually
a sudden & unexpected event!
There is need to act quickly.
A systematic Approach Helps
21
1. Establishing a probable
diagnosis
Hospital/health center visit
Clinical exam/records
Lab. Reports, etc.
22
2. Confirmation of the
existence of outbreak
Comparing data/ previous records –
minimum for 3 years
If no data – use COMMON SENSE!
23
3. Define population at risk
By studying Line - List of cases
Name, Age, Sex, Address
Date of onset of illness
Signs / symptoms
Investigation reports
Treatment taken
Outcome
24
24
4. Search for all cases
Rapid community house to house survey
Pilot survey
Sample size (n) = 4p(1-p)/ L2
Area selection (Affected & surrounding
areas)
Format
Recall period
25
Develop working case- definition
Set of criteria for deciding if a person
should be classified as suffering from
the disease under investigation
Clinical criteria, restrictions of time,
place, person
Simple, practical
26
Case definition
Example-1
Patient older than 5 years with severe
dehydration or dying of acute watery
diarrhoea in town “x” between 15-30
June 2009
27
A
B
C
D
Area wise map of an affected area
E
28
5. Laboratory Investigation
Appropriate clinical specimens
Time of sample collection
Method of collection
Selection of transport media
Labeling
Storage and transportation of samples
District lab / selection of lab
29
Study of environmental conditions
(water, sanitation etc.)
Entomological survey (density of
vectors, Indices)
Study of Zoonotic reservoir (if
required)
6. Environmental, Entomological
& Zoonotic surveys/ studies
30
Person
Place
Time
Cases
0
5
10
15
20
25
1 2 3 4 5 6 7 8 9 10
0
200
400
600
800
1000
1200
0-4 '5-14 '15-44 '45-64 '64+
Age Group
Evaluate information
Pathogen? Source? Transmission?
7.Data Analysis
31
8. Management/ control of outbreak
As per the epidemiological/ clinical
observation manage the cases
Prevent further deaths
Environmental control measures
Strengthen routine & active
surveillance
32
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9. Formulation of hypothesis
Based on data analysis and
interpretation
CONTD.....
40
Benefits of an outbreak
investigation-1
i. To control ongoing/current outbreak
ii. To define the magnitude (time, place,
person)
iii. To determine factors responsible
iv. Source and modes of transmission
41
Benefits of an outbreak
investigation-2
v. To evaluate the effectiveness of existing
surveillance activities at local level
vi. To evaluate the effectiveness of
preventive program
vii. To respond to public or political or legal
concern
viii. To prevent occurrence of future outbreaks
ix. To advance the knowledge about the
disease
x. To provide training opportunity
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20
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Primary
Case
1st case
at HC
Report
to DMO
Lab
result
Samples
taken
Response
begins
DAY
CASES
Opportunity
for control!
Usual Sequence of events in outbreak
detection and confirmation (I)
43
0
10
20
30
40
50
60
70
80
90
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Sequence of events in outbreak detection and confirmation (II)
PRIM HC REP RES
SAMP
Response
begins
DAY
CASES
Potential
Cases Prevented
44
Types of report
Initial “First information report”
Full outbreak investigation report
Rapid assessments
Scientific publications (The most
‘Neglected’ action )
45
General framework of an
outbreak investigation report
(1/4)
1. Executive summary
< one page or < 300 words
Structure with subheadings
2. Background
Territory, origin of the alert, time of
occurrence, places, official staff met
46
General framework of an
outbreak investigation report
(2/4)
3. Methods used for the investigation
Epidemiological methods
Case definition
Case search methods, data collection
Analytical studies if any
Data analysis
Laboratory methods
Environmental investigations
47
General framework of an
outbreak investigation report
(3/4)
4. Major observations / results
Epidemiological results (population at
risk, time, place and person
characteristics)
laboratory diagnosis
Environmental investigation results
Current status of transmission, control
measures adopted/ initiated
48
General framework of an
outbreak investigation report
(4/4)
5. Conclusion: Genesis of outbreak
(Diagnosis, source, vehicles)
6. Recommendations
49
Annexes of the report
1 TIME: Epidemic curve
2. PLACE: Map
Spot map
Map of incidence by area
3. PERSON: Table of incidence by age and
sex
4. Analytical study results if any
50
Be technical
 The District Medical Officer and the
Assistant Secretary of Health joined a team
comprised of myself and three field workers
to go to the site of the outbreak that could
not be reached before three days because
of rains
Focus on technical aspects
 The rapid response team initiated the
investigation on 16 March 2009
51
Examples
Avoid negative statements:
 The district medical officer has not even
started programme implementation in this
district
Prefer specific, documented, diplomatic
opportunity statements:
 Review of 6 out of 7 indicators indicated
that the programme is still at an early phase
in the district
52
Get rid of “should”
 Tuberculosis patients should be counselled
 Counsel tuberculosis patients
 Counselling will decrease default rates
Use both
 Counsel tuberculosis patients to decrease
default rates
53
The six “S” of technical writing
1. Simple
2. Short
3. Structured
4. Sequential
5. Strong
6. Specific
54
The six “S” of technical writing
1. Simple
• Use simple words
• Don’t use jargon technical or statistical
jargon
2. Short
• < 10 pages, < 5 tables / figures
• Use short sentences with one idea each
• Split complex sentences
• Cut unnecessary elements
55
The six “S” of technical writing
3. Structured
• Have headings, subheadings
• Follow the logic argument
4. Sequential
• Go step- by- steps
• Start each sentence where the
previous ended
56
The six “S” of technical writing
5. Strong
Use the verb as the centre of gravity
If the verb is weak, the sentence is weak
6. Specific
• Say clearly and exactly what you want to
say
• Do not paraphrase
• Prefer numbers to qualifiers
57
3. Monitoring the situation
Trends in cases and deaths
Implementation of containment
measures
Stocks of vaccines and drugs
Logistics
Communication
Vehicles
Community involvement
Media response
58
4. Declaring the outbreak over
Role of the district surveillance officer /
Medical health officer
Criteria
No new case during two incubation periods
since onset of last case
Implies careful case search to make sure
no case are missed
59
5. Review of the final report
Sent by medical officer of the primary
health centre to the district surveillance
officer / medical and health officer
within 10 days of the outbreak being
declared over
Review by the technical committee
Identification of system failures
Longer term recommendations
60
Points to remember
1. Outbreaks cause suffering, bad publicity and cost
resources
2. Constant vigil is needed
3. Prompt timely action limits damage
4. Emphasis is on saving lives
5. Don’t diagnose every case once the etiology is clear
6. Management of linked cases does not require
confirmation
7. The development of an outbreak is followed on a
daily basis
8. Effective communication prevents rumours
9. Use one single designated spoke person
10. Learn lessons after the outbreak is over
61
61
A Scenario!
A 23 yr old male student; presented at
10:30 PM on 23rd Feb, at the emergency
complaining of a sudden onset of
abdominal cramping , nausea and
diarrhea. He was not severely
distressed, had no fever or vomiting but
was weak.
61
A Scenario!
A No. of other students, all with the
same symptoms, visited emergency
over next 20 Hrs
All treated with Fluid replacement
and rest.
They recovered fully within 24 hrs.
of the onset of illness.
62
Does it warrant an investigation?
Why?
63
The investigation!
Quick information revealed 47 students
out of 1164 college enrollment got
affected by 8 PM on 24th Feb
what is the quantitative measure of the
extent of an outbreak?
No. of New Cases
AR = Persons at Risk
what is the AR for this period?
64
47/ 1164 X 100 = 4%
It was readily apparent, however that
the PAR need to be defined narrowly!
All those reported lived in hostels and
one third of all students were day
scholars! (756 are hostlers)
47/ 756 X 100 = 6.2% (i.e. 50% increase
in AR)
Because the patient’s hostel was
recorded in records AR could be
calculated hostel and sex wise
65
The Hostel of 47 known cases and the AR, as well as the
population and sex of the occupants of each hostel
Hostel Sex PAR No. of Cases AR
1 F 80 19 23.8
2 F 62 2 3.2
3 F 89 0 0
4 F 61 1 1.6
5 F 53 5 9.4
6 M 35 0 0
7 M 63 0 0
8 F 103 4 3.9
9 M 35 1 2.9
10 M 37 0 0
11 F 34 1 2.9
12 M 62 13 21.0
13 M 32 1 3.1
14 M 10 0 0
Total - 756 47 6.2
66
AR (1, 12) = 19+13/ 80+62 = 22.5%
Risk Ratio = AR hostel (1, 12) / AR (Other
hostels) X 100
= 22.5%/ 2.4% = 9.4
AR BY GENGER?
Visit to hostels revealed that not all
students who became ill reported to
emergency.
Seven hostels were randomly selected
for unbaised information!
67
Response to the questionnaire survey by hostels
Questionnaire returned
Hostel Population Number Percent No. of ill St.
5 53 49 92.5 13
6 35 26 74.3 13
7 63 28 44.4 15
8 103 65 63.1 21
9 35 19 54.3 5
12 62 44 71.0 22
Nurses’
hostel
60 60 100 17
Unidentified - 13 - 4
Total 411 304 74.0 110
68
AR = 110/304 X100 = 36.2%
69
AR of hostel 6 and 12 were 0% and 21%
by emergency data but by survey data
both are 50% - Approach for data
collection!
Was emergency data useless?
Is 36.2% the true AR of
gastroenteritis on campus ?
Explain factors why AR estimated from
emergency records were low?
Why more cases from hostel 1 and 12 at
emergency?
Additional information…..
No large gathering of students
Most students ate at college cafeteria
How will you zero down to source of
infection?
70
St. who ate specific meal St. who did not eat specific meal
Ill Well Total AR(%) Ill Well Total AR(%)
Jan 16
Breakfast 52 100 152 34.2 51 94 145 35.2
Lunch 89 150 239 37.2 20 44 64 31.3
Dinner 87 150 237 36.7 23 44 67 34.3
Jan 17
Breakfast 56 105 161 34.8 42 89 131 32.1
Lunch 106 145 251 42.2 3 49 52 5.8 RR!
Dinner 78 130 208 37.5 31 64 95 32.6
So…can you calculate the IP?
Having identified the meal at which the
students most probably were exposed
to the causal pathogen and
Knowing each student’s time of onset of
symptoms; we can!!
71
IP(hrs) No. of Students Cumulative No. of St.
8 22 22
9 11 33
10 18 51
11 8 59
12 42 101
What next?
A follow up survey to obtain
information about particular foods that
251 students ate at lunch on Jan 17!
If students were uncertain about
whether they ate the food in question,
they were not included in the analysis of
the particular food. As a result total of
those who ate or did not eat each
specific item did not equal 251 for all
items
72
Food specific histories of students who ate lunch
at the college cafteria on Jan 17th
Food/ beverage St. who ate Sp. Food /
Beverage
St. who did not eat Sp. Food /
Beverage
Ill Well Total AR (%) Ill Well Total AR (%)
Fish 16 36 52 30.8 87 103 190 45.8
Lamb curry 95 56 151 62.9 7 82 89 7.9
noodle 12 57 69 17.4 92 80 172 53.5
Pineapple kheer 58 54 112 51.8 39 69 108 36.1
Fruit salad 32 39 71 45.1 63 82 145 43.4
Cabbage salad 4 5 9 44.4 95 126 221 43.0
Chocolate ice cream with
vanilla sauce
19 29 48 39.6 80 102 182 44.0
Chocolate ice cream without
vanilla sauce
62 77 139 44.6 39 56 95 41.1
Badam Milk 91 127 218 41.7 12 13 25 48.0
Cofee 10 31 41 24.4 89 103 192 46.4
tea 23 19 42 54.8 78 114 192 40.6
73
74
Tools for Quantifying
The Epidemic
1. Case definition
2. Epidemic curve
Point source (common
source, common vehicle)
Propagated
3. Attack Rate
4. Serial interval/ I P
75
Getting At The Source
1. Mode of transmission
2. Portal of entry
3. Reservoir
4. Vector
5. Vehicle
6. Agent
76
Only work in the field can uncover
the way in which an agent links to a
host in the real world (Environment)
outside of the laboratory.
Snow discovered the waterborne
route as a major mode of
communication of disease, which
turned out to apply not only to
cholera, but also to typhoid fever and
other infections.
Remember:
77
Steps in Investigation
Prepare for field work
Establish existence of outbreak
Verify diagnosis
Define and identify cases
Perform descriptive epidemiology
78
Steps in Investigation
Develop hypotheses
Evaluate hypotheses
Refine hypotheses and conduct
additional studies
Implement control measures
Communicate findings
79
Step 1:
Prepare for
Field Work
80
Only work in the field can uncover the
way in which an agent links to a host in the
real world (Environment) outside of the
laboratory.
Snow discovered the waterborne route as
a major mode of communication of
disease, which turned out to apply not only
to cholera, but also to typhoid fever and
other infections.
Remember:
81
Prepare for Field Work
Investigation
Scientific knowledge--have it or get it!
Supplies, equipment
Assemble your team
Administration
Review local directives or plans
Consultation
Know your role, especially if off-base
Prepare for Field Work
Sample questionnaires
Key community contacts
Laboratory containers and collection
techniques
82
83
Identify Outbreak Team
Epidemiologist
Laboratory workers
Environmental health
specialists
Local health department
Other state agencies
84
Step 2:
Establish Existence
of Outbreak
85
2. Establish the Existence of An Outbreak
Determine if disease incidence is higher than background
level
How do you determine background level ? -surveillance
Reasons for Observed >Expected
Change in reporting procedures
Change in case definition
Increased awareness or interest
Improved diagnostics
New clinician
Change in Population
True increase
86
Questionnaires
Used to collect complete, uniform
histories
Identifiers
Demographics
Clinical information
Risk factors
Administer as soon as possible
disseminate
interview personally
Both cases and controls
Recall bias important
Can summarize on line listing
87
Levels of Illness
Endemic level
Hyper endemic level
Epidemic level
(outbreak)
Pandemic level
88
Step 3:
Verify the Diagnosis
89
Review Clinical Data
Signs and symptoms
Onset dates
Common exposures
Obtain lab results, if any
90
Step 4:
Define and
Identify Cases
91
4. Define and Identify Cases
Outbreak Case Definition:
-Clinical information (signs and symptoms)
- Person
- Place
- Time
Case Definition Sources
Routine reporting:
Use Standard case definitions
Unknown etiology:
Make up your own case definition
make sure everyone uses the same case
definition
92
Establish Case Definition
Criteria to decide whether person is part
of outbreak
time, place, person
clinical criteria
Can change during investigation
Keep loose at first, tighten later
93
Case Classification
Confirmed: laboratory results
Probable: clinical criteria without
lab verification
Suspect: some clinical criteria
94
Identify and Count Cases
Develop a wide network
Initiate active surveillance
Case: meets case definition
Control: exposed, not ill
95
Identify Population At Risk
Survey hospitals
Review surveillance data
Question known cases to identify
others
Review guest lists, enrollment
records, etc.
96
Identify Population At Risk
Survey hospitals, ERs, MDs
Review surveillance data
Question known cases to identify others
Review guest lists, enrollment records,
manifests, etc.
97
Questionnaires
Used to collect complete, uniform histories
Identifiers
Demographics
Clinical information
Risk factors
Administer as soon as possible
disseminate
interview personally
Both cases and controls
Recall bias important
Can summarize on line listing
98
Line Listings
Spreadsheet format
One row = one case
Columns = variables
99
Step 5:
Perform Descriptive
Epidemiology
100
Descriptive Epidemiology
Describe outbreak by
time
place
person
Become familiar with data
Get clues about infectious agent
101
Epidemic Curves: Time
Plot number of cases by onset date
Index case: first case of outbreak
Determine time course and future
course, exposure period
102
Endemic vs. Epidemic
Endemic Epidemic
No.
of
Cases
of
a
Disease
Time
103
• This is the most common form of transmission
in food-borne disease, in which a large
population is exposed for a short period of
time.
Point Source Transmission
104
Point Source Outbreaks
All exposed at one time
Cases occur suddenly after minimum
incubation time
All cases occur within one incubation
period
Outbreak stops unless secondary spread
Curves have steep upslope, more
gradual down slope
105
Continuous Common Source
May begin suddenly or gradually
Cases do not disappear because of
secondary exposure
Curves have gradual or steep
upslope, plateau trickling down
slope, and may repeat
106
Continuous Common Source
Onset Dates of Illness
Indianapolis, 2002
0
1
2
3
4
5
6
7
8
9
10
3/10/02 3/11/02 3/12/02 3/13/02 3/14/02 3/15/02 3/16/02 3/17/02 3/18/02 3/19/02
Onset Date
Cases
Other*
Dietary Staff
Other Staff
Residents
107
• In this case, there are several peaks, and the
incubation period cannot be identified.
Continuing Common Source or
Intermittent Exposure
108
Propagated Outbreaks
Typical of person-to-person
outbreaks
Secondary cases appear one
incubation period after peak of first
wave
Taller successive waves of cases
109
Propagated Outbreaks
Onset Dates of Illness
Indianapolis, 2000
0
1
2
3
4
5
6
7
8
11/21/00 11/22/00 11/23/00 11/24/00 11/25/00 11/26/00 11/27/00 11/28/00 11/29/00 11/30/00 12/1/00
Onset Date
Cases
Food Staff
Medical Staff
Residents
110
Propagated Outbreaks
111
112
Person
Host characteristics
age
sex
Exposures
occupation
food consumption
leisure activities
113
Place
Spot maps
Simple and effective
Identifies-
–Geographic extent of outbreak
–Clustering or pattern
114
Spot Maps: Place
One spot = case
Community
Facilities
Recreational sites
Population density not reflected
115
Time
Draw epidemic curve
No. of cases over time
graphed by date or time of
onset of symptoms
Tells Us:
“Where are we now?”
“What’s the forecast?”
Probable time of
exposure
Epidemic pattern
116
Step 6:
Developing Hypotheses
117
6.Develop Hypothesis
Round up usual suspects!
Type of agent
Source of agent
Mode of transmission
Usual reservoirs
Known risk factors
Exposures that caused disease
Look at person, place and time for clues
Be able to test
118
Develop Hypothesis
Requires familiarity with disease
Hypothesis should be testable
Still clueless?
Talk with cases again
Visit work sites or billeting area
Don’t forget outliers
119
Developing Hypotheses
Type of agent
Source of agent
Mode of
transmission
Exposures
Be able to test
120
Step 7:
Evaluating Hypotheses
121
Analytic Epidemiology
Quantify relationships between
exposures and disease
Test hypotheses about causes
Comparison groups
cohort study
case-control study
122
Evaluate Hypothesis via Analytical
Epidemiology
Determine exposure variables.
Compare ill to not ill.
Construct a 2 X 2 table
Perform Cohort or Case Control Study
Use Cohort study when:
- Population at risk is known
(you have a denominator)
Interview “ill” and “not ill”
Calculate attack rates - “ate” v/s
“didn’t eat”
Put on food-specific attack rate table
123
Cohort Studies
Defined population
Can contact all in timely manner
Calculate attack rate
Calculate risk ratio to determine
risk of contracting illness from
exposure
124
Attack Rates
Calculate for those ill and exposed and
those ill and not exposed
Number of new cases in population during
period
Population at risk x100 at
beginning of period
125
Calculate attack rates
Attack rate = (ill / ill + well) x 100 during a
time period
If there is an obvious commonality for the
outbreak, calculate attack rates based on
exposure status (a community picnic)
If there is no obvious commonality for the
outbreak, calculate attack rates based on
specific demographic variables (hepatitis cases
in a community)
126
Example: Calculation of A R for Food X
Ate the food Did not eat the food
Ill Well Total Attack
Rate
Ill Well Total Attack
Rate
10 3 13 76% 7 4 11 64%
Attack Rate = ill / (ill + Well) x 100 during a time period
Attack rate = (10/13) x 100 = 76%
(7/11) x 100 = 64%
127
Risk Ratios
attack rate of ill and exposed a/(a+b)
attack rate of ill, not exposed c/(c+d)
>1.0 = increased risk
1.0 = same as chance
<1.0 = decreased risk
128
Case-Control Studies
Population not defined
Select sample groups of cases and
controls
Calculate odds ratio to determine
likelihood of contracting illness
from exposure (see table 6.7)
129
Odds Ratios
Cross multiply and divide
a b
c d
ad
bc
>1.0 = increased likelihood
1.0 = same as chance
<1.0 = decreased likelihood
130
Step 8:
Additional Studies
131
Clinical Specimens
Identifies agent and confirms cases
Obtain results if already collected
Collect specimens if necessary
Type of specimen depends on
suspected agent, nature of
outbreak
132
Collect Clinical Specimens
Containers available from ISDH
to order call 317-233-8104
Must use containers in date!
7A: enteric bacteria, viruses
4A: parasites
5A: pertussis
133
Collect Clinical Specimens
Specimens must be labeled with
patient’s name and collection
date
Indicate on form that specimen
is related to investigation
134
Collect Clinical Specimens
Submission form(s) must be
completed and enclosed with
specimen
Local health department should
collect and transport specimens to
ISDH lab
135
Environmental Investigation
Help explain why outbreak
occurred
Begins when suspected mode of
transmission identified
Identifies vehicle of transmission
Samples: food, water, air
136
Step 9:
Implement Control
Measures
137
Control Measures
Aim at weakest link
in infection cycle
Epi Triad
Infectious
Agent
Reservoir
Susceptible
Host
138
Possible Options
Post-exposure prophylaxis/treatment
Recalling/destroying food
Providing educational information
Closing an establishment
Exclusion (work, daycare, school)
Making public announcements
139
Media Relations
Communication between ISDH and LHD
extremely important
LHD generally handles media calls
within jurisdiction but ISDH can provide
guidance
All media calls to ISDH routed through
Office of Public Affairs
140
Media Calls
Confirm investigation underway
Provide only confirmed or statistically
proven information
Be careful mentioning businesses
Never speculate or provide identifiers
Remain calm and do not be rushed
141
Step 10:
Communicate Findings
142
Investigation Report
Outlines
investigation
Agency
analyzing
questionnaires
writes report
143
Purpose of Report
Prevent similar outbreaks
Identify trends/causal factors
Justify resources used
Serves as public record
144
Report Format
Cover page in memo format
Background
Epidemiologic investigation
Environmental assessment
Laboratory results
Conclusions
145
Real-Life Examples
146
On Dec.31,2009, the local health
officer of Jaipur, reported the
occurrence of an outbreak of acute
gastrointestinal illness to the District
Health Officer. Dr. X, epidemiologist-
in-training, was assigned to conduct
an investigation.
Investigating an Epidemic:
The Dinner was held at Hotel . Food
was prepared by Chefs of the Hotel. The
Dinner began at 8:00 PM and continued
until 11:00 PM.
Investigating an Epidemic:
147
When Dr. X arrived in the field, he
learned from the health officer that all
persons known to be ill had attended a
dinner at Hotel on Dec. 31, 2004 Family
members who had not attended the
Dinner had not become ill.
Accordingly, the investigation was
focused on the circumstances related to
the supper.
148
148
Q: Is this an Epidemic?
Endemic for the region?
Due to seasonal variation?
Due to random variation?
What might be the agent?
How is this agent transmitted?
What am I looking for?
149
149
Verify the outbreak
Determine whether there is an
outbreak – an excess number of cases
from what would be expected
Establish a case definition
Non-ambiguous (distinct/ clear)
Clinical / diagnostic verification
Person / Place / Time descriptions
Identify and count cases of illness
150
Select the correct case definition
and find the error in the others:
1. All Invitees in Dinner held in Hotel on Dec.31,2004
between 8:00 PM and 11:00 PM; whether they attended
Dinner or not; whether they participated in food
preparation, transport, or distribution or not; whether they
ate or not.
2. Persons who developed acute gastrointestinal symptoms
within 72 hours of eating supper and who were among
Invitees in Dinner held in Hotel Clarks on Dec.31,2004.
3. Invitees who developed acute gastrointestinal symptoms
within 24 hours of the Dinner held in Hotel on
Dec.31,2004 between 8:00 PM and 11:00 PM
151
Select the correct case definition
and find the error in the others:
1. All invitees to the Marriage Dinner held in Hotel on October
21, 2002between 8:00 PM and 11:00 PM; whether they
attended Marriage or not; whether they participated in food
preparation, transport, or distribution or not; whether they
ate or not. Missing definition of sickness
2. Persons who developed acute gastrointestinal symptoms
within 24 hours of eating Dinner on Dec.31,2004 and who
were among invitees of the marriage dinner. CORRECT
3. Invitees who developed acute gastrointestinal symptoms
within 24 hours Dinner on Dec.31,2004. Did not specify that
they went to the dinner
152
Investigating an Epidemic:
Interviews regarding the presence of
symptoms, including the day and hour of
onset, and the food consumed at the
Dinner, were completed on 75 of the 80
persons known to have been present.
A total of 46 persons who had
experienced gastrointestinal illness were
identified.
152
153
Menu:
Baked Vegetable
Malai paneer
Dum Aaloo
Cabbage salad
Paneer Khumb
Raita
Missi Roti/ Plain Roti
Raj bhog
Coffee
Water
Cream salad
Ice cream (van)
Ice cream (choc)
Fruit salad
154
Which menu item (s) is the
potential culprit?
To find out, calculate attack rates!
Attack Rates among?
The foods that have the greatest
difference in the attack rates among
who ate and who did not eat, may be
the food(s) that were responsible for
the illness.
155
156
Attack Rates by Items Served:
Number of persons who ate
specified item
Number of persons who did not
eat specified item
ill Well Total Attack rate
(%)
ill Well Total Attack rate
%
Baked
Vegetable
29 17 46 17 12 29
Malai paneer 26 17 43 20 12 32
Dum Aaloo 23 14 37 23 14 37
Cabbage salad 18 10 28 28 19 47
Paneer Khumb 16 7 23 30 22 52
Raita 21 16 37 25 13 38
Missi Roti 18 9 27 28 20 48
Raj bhog 2 2 4 44 27 71
Coffee 19 12 31 27 17 44
Water 13 11 24 33 18 51
Cream salad 27 13 40 19 16 35
Ice cream (van) 43 11 54 3 18 21
Ice cream
(choc)
25 22 47 20 7 27
Fruit salad 4 2 6 42 27 69
157
Attack Rates by Items Served:
Number of persons who ate
specified item
Number of persons who did not
eat specified item
Ill Well Total Attack rate
(%)
Ill Well Total Attack
rate %
Baked
Vegetable
29 17 46 63 17 12 29 59
Malai paneer 26 17 43 60 20 12 32 62
Dum Aaloo 23 14 37 62 23 14 37 62
Cabbage salad 18 10 28 64 28 19 47 60
Paneer Khumb 16 7 23 70 30 22 52 58
Raita 21 16 37 57 25 13 38 66
Missi Roti 18 9 27 67 28 20 48 58
Raj bhog 2 2 4 50 44 27 71 62
Coffee 19 12 31 61 27 17 44 61
Water 13 11 24 54 33 18 51 65
Cream salad 27 13 40 67 19 16 35 54
Ice cream (van) 43 11 54 80 3 18 21 14
Ice cream
(choc)
25 22 47 53 20 7 27 74
Fruit salad 4 2 6 67 42 27 69 61
158
Improper cooling of foods
Improper cooking of foods
Improper reheating of foods
Improper holding temperature
of foods
Cross contamination
Infected food handlers, poor
employee hygiene
Major Causes of Food borne Disease
159
Summary
The Epi Approach...
Identify a problem
Investigate and collect data
Describe data in terms of person,
place and time
Formulate a hypothesis
Test your hypothesis
160
Bottom Line...
Collect good descriptive data
Be observant -- Be objective
Keep Authority informed
Be sure to collect data on both the “ill”
and the “not ill”
Ask for help
Disease prevention!
161
Conclusion
An attack of gastroenteritis occurred
following a Dinner at Hotel Clarks.
The cause of the outbreak was
contaminated vanilla ice cream.

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Epidemiology Lectures for UG

  • 1. 1 Outbreak Investigation, Response and Control Dr. Amita kashyap
  • 2. 2 2 Definition of an outbreak Occurrence of cases of an illness clearly in excess of expected numbers The occurrence of two or more epidemiologically linked cases of a disease of outbreak potential (e.g., Measles, Cholera, Dengue, Japanese encephalitis, or plague)
  • 3. 3 3 Outbreak and epidemic: A question of scale Outbreaks Outbreaks are usually limited, usually within one district or few blocks Epidemics An epidemic covers larger geographic areas Epidemics usually linked to control measures on a district/state wide basis
  • 4. 4 4 What does it Require? A pathogen in sufficient quantities, A mode of transmission, And a pool of susceptible people 4
  • 5. 5 5 Sources of information Rumour register To be kept in standardized format in each institution Rumours need to be investigated Community informants Private and public sector Media Important source of information, not to neglect Review of routine data Triggers
  • 6. 6 6 Early warning signals for an outbreak Clustering of cases or deaths Increases in cases or deaths Single case of disease of epidemic potential Acute febrile illness of an unknown etiology Two or more linked cases of epidemic potential Unusual isolate Shifting in age distribution of cases High vector density Natural disasters
  • 7. 7 7 Why Investigate? 1. Verify and Recognize the magnitude 2. Diagnose the agent 3. Identify the source and mode of transmission 4. Formulate prevention and control measures 5. Public concerns Host Environment Agent An outbreak comes from a change in the way the host, the environment and the agent interact: This interaction needs to be understood to propose recommendations
  • 8. 8 8 0 10 20 30 40 50 60 70 80 90 1 3 5 7 9 11 13 15 17 19 21 23 25 27 29 31 33 35 37 39 Primary Case 1st case at HC Report to DMO Lab result Samples taken Response begins DAY CASES Opportunity for control! Usual Sequence of events in outbreak detection and confirmation (I)
  • 9. 9 9 9 Importance of timely action: The first information report (Form C) Filled by the reporting unit Submitted to the District Surveillance Officer as soon as the suspected outbreak is verified Sent by the fastest route of information available Telephone Fax E-mail
  • 10. Epidemic preparedness Formation & Training of RRT Regular review of data Alertness during known ‘outbreak season’ Identifying ‘outbreak prone areas’ Ensuring that these areas have necessary drugs and materials (including transport media) Identifying & strengthening the labs Designating vehicles Ensuring communication channels
  • 11. 11 11 11 The rapid response team Composition Epidemiologist, clinician and microbiologist Gathered on ad hoc basis when needed Role Confirm and investigate outbreaks Responsibility Assist in the investigation and response Primary responsibility rests with local health staff
  • 12. 12 12 Levels of response to different triggers Trigger Significance Levels of response 1 Suspected /limited outbreak • Local response by health worker and medical officer 2 Outbreak • Local and district response by district surveillance officer and rapid response team 3 Confirmed outbreak • Local, district and state 4 Wide spread epidemic • State level response 5 Natural disaster • Local, district, state and centre
  • 13. 13 13 The balance between investigation and control while responding to an outbreak Source / transmission Known Unknown Etiology Known Control +++ Investigate + Control + Investigate +++ Unknown Control +++ Investigate +++ Control + Investigate +++
  • 14. 14
  • 15. Steps of an outbreak investigation -1/3 1. Establishing a probable diagnosis 2. Confirmation of the existence of outbreak 3. Define population at risk 4. Search for all cases – RRT (Interim report by RRT within one week
  • 16. Steps of an outbreak investigation Actions-2/3 5. Management of cases, and Monitoring the situation 6. Environmental and Entomological studies 8. Laboratory studies 10. Implementation of control and preventive measures 11. Data analysis & interpretation CONTD.....
  • 17. Steps of an outbreak investigation Actions-3/3 12. Formulation of hypothesis 13. Testing of hypothesis 14. Declaring the outbreak to be over 15. Final report & its Review within 10 days of the outbreak declared to be over 16. Documentation a. Report b. Publication
  • 18. Unusual Health Event No Yes Is this an outbreak Etiology, Source & Transmission known? No Yes Institute control measures Further Investigation Describe outbreak in terms of TPP Continued….
  • 19. Develop Hypothesis regarding Source, Transmission, Etiology & PAR yes No Does the Hypothesis Fit with facts Institute control measures Special studies Remember that outbreak is usually a sudden & unexpected event! There is need to act quickly. A systematic Approach Helps
  • 20. 21 1. Establishing a probable diagnosis Hospital/health center visit Clinical exam/records Lab. Reports, etc.
  • 21. 22 2. Confirmation of the existence of outbreak Comparing data/ previous records – minimum for 3 years If no data – use COMMON SENSE!
  • 22. 23 3. Define population at risk By studying Line - List of cases Name, Age, Sex, Address Date of onset of illness Signs / symptoms Investigation reports Treatment taken Outcome
  • 23. 24 24 4. Search for all cases Rapid community house to house survey Pilot survey Sample size (n) = 4p(1-p)/ L2 Area selection (Affected & surrounding areas) Format Recall period
  • 24. 25 Develop working case- definition Set of criteria for deciding if a person should be classified as suffering from the disease under investigation Clinical criteria, restrictions of time, place, person Simple, practical
  • 25. 26 Case definition Example-1 Patient older than 5 years with severe dehydration or dying of acute watery diarrhoea in town “x” between 15-30 June 2009
  • 26. 27 A B C D Area wise map of an affected area E
  • 27. 28 5. Laboratory Investigation Appropriate clinical specimens Time of sample collection Method of collection Selection of transport media Labeling Storage and transportation of samples District lab / selection of lab
  • 28. 29 Study of environmental conditions (water, sanitation etc.) Entomological survey (density of vectors, Indices) Study of Zoonotic reservoir (if required) 6. Environmental, Entomological & Zoonotic surveys/ studies
  • 29. 30 Person Place Time Cases 0 5 10 15 20 25 1 2 3 4 5 6 7 8 9 10 0 200 400 600 800 1000 1200 0-4 '5-14 '15-44 '45-64 '64+ Age Group Evaluate information Pathogen? Source? Transmission? 7.Data Analysis
  • 30. 31 8. Management/ control of outbreak As per the epidemiological/ clinical observation manage the cases Prevent further deaths Environmental control measures Strengthen routine & active surveillance
  • 31. 32
  • 32. 33
  • 33. 34
  • 34. 35
  • 35. 36
  • 36. 37
  • 37. 38
  • 38. 39 9. Formulation of hypothesis Based on data analysis and interpretation CONTD.....
  • 39. 40 Benefits of an outbreak investigation-1 i. To control ongoing/current outbreak ii. To define the magnitude (time, place, person) iii. To determine factors responsible iv. Source and modes of transmission
  • 40. 41 Benefits of an outbreak investigation-2 v. To evaluate the effectiveness of existing surveillance activities at local level vi. To evaluate the effectiveness of preventive program vii. To respond to public or political or legal concern viii. To prevent occurrence of future outbreaks ix. To advance the knowledge about the disease x. To provide training opportunity
  • 41. 42 42 0 10 20 30 40 50 60 70 80 90 1 3 5 7 9 11 13 15 17 19 21 23 25 27 29 31 33 35 37 39 Primary Case 1st case at HC Report to DMO Lab result Samples taken Response begins DAY CASES Opportunity for control! Usual Sequence of events in outbreak detection and confirmation (I)
  • 42. 43 0 10 20 30 40 50 60 70 80 90 1 4 7 1 0 1 3 1 6 1 9 2 2 2 5 2 8 3 1 3 4 3 7 4 0 Sequence of events in outbreak detection and confirmation (II) PRIM HC REP RES SAMP Response begins DAY CASES Potential Cases Prevented
  • 43. 44 Types of report Initial “First information report” Full outbreak investigation report Rapid assessments Scientific publications (The most ‘Neglected’ action )
  • 44. 45 General framework of an outbreak investigation report (1/4) 1. Executive summary < one page or < 300 words Structure with subheadings 2. Background Territory, origin of the alert, time of occurrence, places, official staff met
  • 45. 46 General framework of an outbreak investigation report (2/4) 3. Methods used for the investigation Epidemiological methods Case definition Case search methods, data collection Analytical studies if any Data analysis Laboratory methods Environmental investigations
  • 46. 47 General framework of an outbreak investigation report (3/4) 4. Major observations / results Epidemiological results (population at risk, time, place and person characteristics) laboratory diagnosis Environmental investigation results Current status of transmission, control measures adopted/ initiated
  • 47. 48 General framework of an outbreak investigation report (4/4) 5. Conclusion: Genesis of outbreak (Diagnosis, source, vehicles) 6. Recommendations
  • 48. 49 Annexes of the report 1 TIME: Epidemic curve 2. PLACE: Map Spot map Map of incidence by area 3. PERSON: Table of incidence by age and sex 4. Analytical study results if any
  • 49. 50 Be technical  The District Medical Officer and the Assistant Secretary of Health joined a team comprised of myself and three field workers to go to the site of the outbreak that could not be reached before three days because of rains Focus on technical aspects  The rapid response team initiated the investigation on 16 March 2009
  • 50. 51 Examples Avoid negative statements:  The district medical officer has not even started programme implementation in this district Prefer specific, documented, diplomatic opportunity statements:  Review of 6 out of 7 indicators indicated that the programme is still at an early phase in the district
  • 51. 52 Get rid of “should”  Tuberculosis patients should be counselled  Counsel tuberculosis patients  Counselling will decrease default rates Use both  Counsel tuberculosis patients to decrease default rates
  • 52. 53 The six “S” of technical writing 1. Simple 2. Short 3. Structured 4. Sequential 5. Strong 6. Specific
  • 53. 54 The six “S” of technical writing 1. Simple • Use simple words • Don’t use jargon technical or statistical jargon 2. Short • < 10 pages, < 5 tables / figures • Use short sentences with one idea each • Split complex sentences • Cut unnecessary elements
  • 54. 55 The six “S” of technical writing 3. Structured • Have headings, subheadings • Follow the logic argument 4. Sequential • Go step- by- steps • Start each sentence where the previous ended
  • 55. 56 The six “S” of technical writing 5. Strong Use the verb as the centre of gravity If the verb is weak, the sentence is weak 6. Specific • Say clearly and exactly what you want to say • Do not paraphrase • Prefer numbers to qualifiers
  • 56. 57 3. Monitoring the situation Trends in cases and deaths Implementation of containment measures Stocks of vaccines and drugs Logistics Communication Vehicles Community involvement Media response
  • 57. 58 4. Declaring the outbreak over Role of the district surveillance officer / Medical health officer Criteria No new case during two incubation periods since onset of last case Implies careful case search to make sure no case are missed
  • 58. 59 5. Review of the final report Sent by medical officer of the primary health centre to the district surveillance officer / medical and health officer within 10 days of the outbreak being declared over Review by the technical committee Identification of system failures Longer term recommendations
  • 59. 60 Points to remember 1. Outbreaks cause suffering, bad publicity and cost resources 2. Constant vigil is needed 3. Prompt timely action limits damage 4. Emphasis is on saving lives 5. Don’t diagnose every case once the etiology is clear 6. Management of linked cases does not require confirmation 7. The development of an outbreak is followed on a daily basis 8. Effective communication prevents rumours 9. Use one single designated spoke person 10. Learn lessons after the outbreak is over
  • 60. 61 61 A Scenario! A 23 yr old male student; presented at 10:30 PM on 23rd Feb, at the emergency complaining of a sudden onset of abdominal cramping , nausea and diarrhea. He was not severely distressed, had no fever or vomiting but was weak. 61
  • 61. A Scenario! A No. of other students, all with the same symptoms, visited emergency over next 20 Hrs All treated with Fluid replacement and rest. They recovered fully within 24 hrs. of the onset of illness. 62
  • 62. Does it warrant an investigation? Why? 63
  • 63. The investigation! Quick information revealed 47 students out of 1164 college enrollment got affected by 8 PM on 24th Feb what is the quantitative measure of the extent of an outbreak? No. of New Cases AR = Persons at Risk what is the AR for this period? 64
  • 64. 47/ 1164 X 100 = 4% It was readily apparent, however that the PAR need to be defined narrowly! All those reported lived in hostels and one third of all students were day scholars! (756 are hostlers) 47/ 756 X 100 = 6.2% (i.e. 50% increase in AR) Because the patient’s hostel was recorded in records AR could be calculated hostel and sex wise 65
  • 65. The Hostel of 47 known cases and the AR, as well as the population and sex of the occupants of each hostel Hostel Sex PAR No. of Cases AR 1 F 80 19 23.8 2 F 62 2 3.2 3 F 89 0 0 4 F 61 1 1.6 5 F 53 5 9.4 6 M 35 0 0 7 M 63 0 0 8 F 103 4 3.9 9 M 35 1 2.9 10 M 37 0 0 11 F 34 1 2.9 12 M 62 13 21.0 13 M 32 1 3.1 14 M 10 0 0 Total - 756 47 6.2 66
  • 66. AR (1, 12) = 19+13/ 80+62 = 22.5% Risk Ratio = AR hostel (1, 12) / AR (Other hostels) X 100 = 22.5%/ 2.4% = 9.4 AR BY GENGER? Visit to hostels revealed that not all students who became ill reported to emergency. Seven hostels were randomly selected for unbaised information! 67
  • 67. Response to the questionnaire survey by hostels Questionnaire returned Hostel Population Number Percent No. of ill St. 5 53 49 92.5 13 6 35 26 74.3 13 7 63 28 44.4 15 8 103 65 63.1 21 9 35 19 54.3 5 12 62 44 71.0 22 Nurses’ hostel 60 60 100 17 Unidentified - 13 - 4 Total 411 304 74.0 110 68 AR = 110/304 X100 = 36.2%
  • 68. 69 AR of hostel 6 and 12 were 0% and 21% by emergency data but by survey data both are 50% - Approach for data collection! Was emergency data useless? Is 36.2% the true AR of gastroenteritis on campus ? Explain factors why AR estimated from emergency records were low? Why more cases from hostel 1 and 12 at emergency?
  • 69. Additional information….. No large gathering of students Most students ate at college cafeteria How will you zero down to source of infection? 70 St. who ate specific meal St. who did not eat specific meal Ill Well Total AR(%) Ill Well Total AR(%) Jan 16 Breakfast 52 100 152 34.2 51 94 145 35.2 Lunch 89 150 239 37.2 20 44 64 31.3 Dinner 87 150 237 36.7 23 44 67 34.3 Jan 17 Breakfast 56 105 161 34.8 42 89 131 32.1 Lunch 106 145 251 42.2 3 49 52 5.8 RR! Dinner 78 130 208 37.5 31 64 95 32.6
  • 70. So…can you calculate the IP? Having identified the meal at which the students most probably were exposed to the causal pathogen and Knowing each student’s time of onset of symptoms; we can!! 71 IP(hrs) No. of Students Cumulative No. of St. 8 22 22 9 11 33 10 18 51 11 8 59 12 42 101
  • 71. What next? A follow up survey to obtain information about particular foods that 251 students ate at lunch on Jan 17! If students were uncertain about whether they ate the food in question, they were not included in the analysis of the particular food. As a result total of those who ate or did not eat each specific item did not equal 251 for all items 72
  • 72. Food specific histories of students who ate lunch at the college cafteria on Jan 17th Food/ beverage St. who ate Sp. Food / Beverage St. who did not eat Sp. Food / Beverage Ill Well Total AR (%) Ill Well Total AR (%) Fish 16 36 52 30.8 87 103 190 45.8 Lamb curry 95 56 151 62.9 7 82 89 7.9 noodle 12 57 69 17.4 92 80 172 53.5 Pineapple kheer 58 54 112 51.8 39 69 108 36.1 Fruit salad 32 39 71 45.1 63 82 145 43.4 Cabbage salad 4 5 9 44.4 95 126 221 43.0 Chocolate ice cream with vanilla sauce 19 29 48 39.6 80 102 182 44.0 Chocolate ice cream without vanilla sauce 62 77 139 44.6 39 56 95 41.1 Badam Milk 91 127 218 41.7 12 13 25 48.0 Cofee 10 31 41 24.4 89 103 192 46.4 tea 23 19 42 54.8 78 114 192 40.6 73
  • 73. 74 Tools for Quantifying The Epidemic 1. Case definition 2. Epidemic curve Point source (common source, common vehicle) Propagated 3. Attack Rate 4. Serial interval/ I P
  • 74. 75 Getting At The Source 1. Mode of transmission 2. Portal of entry 3. Reservoir 4. Vector 5. Vehicle 6. Agent
  • 75. 76 Only work in the field can uncover the way in which an agent links to a host in the real world (Environment) outside of the laboratory. Snow discovered the waterborne route as a major mode of communication of disease, which turned out to apply not only to cholera, but also to typhoid fever and other infections. Remember:
  • 76. 77 Steps in Investigation Prepare for field work Establish existence of outbreak Verify diagnosis Define and identify cases Perform descriptive epidemiology
  • 77. 78 Steps in Investigation Develop hypotheses Evaluate hypotheses Refine hypotheses and conduct additional studies Implement control measures Communicate findings
  • 79. 80 Only work in the field can uncover the way in which an agent links to a host in the real world (Environment) outside of the laboratory. Snow discovered the waterborne route as a major mode of communication of disease, which turned out to apply not only to cholera, but also to typhoid fever and other infections. Remember:
  • 80. 81 Prepare for Field Work Investigation Scientific knowledge--have it or get it! Supplies, equipment Assemble your team Administration Review local directives or plans Consultation Know your role, especially if off-base
  • 81. Prepare for Field Work Sample questionnaires Key community contacts Laboratory containers and collection techniques 82
  • 82. 83 Identify Outbreak Team Epidemiologist Laboratory workers Environmental health specialists Local health department Other state agencies
  • 84. 85 2. Establish the Existence of An Outbreak Determine if disease incidence is higher than background level How do you determine background level ? -surveillance Reasons for Observed >Expected Change in reporting procedures Change in case definition Increased awareness or interest Improved diagnostics New clinician Change in Population True increase
  • 85. 86 Questionnaires Used to collect complete, uniform histories Identifiers Demographics Clinical information Risk factors Administer as soon as possible disseminate interview personally Both cases and controls Recall bias important Can summarize on line listing
  • 86. 87 Levels of Illness Endemic level Hyper endemic level Epidemic level (outbreak) Pandemic level
  • 88. 89 Review Clinical Data Signs and symptoms Onset dates Common exposures Obtain lab results, if any
  • 90. 91 4. Define and Identify Cases Outbreak Case Definition: -Clinical information (signs and symptoms) - Person - Place - Time Case Definition Sources Routine reporting: Use Standard case definitions Unknown etiology: Make up your own case definition make sure everyone uses the same case definition
  • 91. 92 Establish Case Definition Criteria to decide whether person is part of outbreak time, place, person clinical criteria Can change during investigation Keep loose at first, tighten later
  • 92. 93 Case Classification Confirmed: laboratory results Probable: clinical criteria without lab verification Suspect: some clinical criteria
  • 93. 94 Identify and Count Cases Develop a wide network Initiate active surveillance Case: meets case definition Control: exposed, not ill
  • 94. 95 Identify Population At Risk Survey hospitals Review surveillance data Question known cases to identify others Review guest lists, enrollment records, etc.
  • 95. 96 Identify Population At Risk Survey hospitals, ERs, MDs Review surveillance data Question known cases to identify others Review guest lists, enrollment records, manifests, etc.
  • 96. 97 Questionnaires Used to collect complete, uniform histories Identifiers Demographics Clinical information Risk factors Administer as soon as possible disseminate interview personally Both cases and controls Recall bias important Can summarize on line listing
  • 97. 98 Line Listings Spreadsheet format One row = one case Columns = variables
  • 99. 100 Descriptive Epidemiology Describe outbreak by time place person Become familiar with data Get clues about infectious agent
  • 100. 101 Epidemic Curves: Time Plot number of cases by onset date Index case: first case of outbreak Determine time course and future course, exposure period
  • 101. 102 Endemic vs. Epidemic Endemic Epidemic No. of Cases of a Disease Time
  • 102. 103 • This is the most common form of transmission in food-borne disease, in which a large population is exposed for a short period of time. Point Source Transmission
  • 103. 104 Point Source Outbreaks All exposed at one time Cases occur suddenly after minimum incubation time All cases occur within one incubation period Outbreak stops unless secondary spread Curves have steep upslope, more gradual down slope
  • 104. 105 Continuous Common Source May begin suddenly or gradually Cases do not disappear because of secondary exposure Curves have gradual or steep upslope, plateau trickling down slope, and may repeat
  • 105. 106 Continuous Common Source Onset Dates of Illness Indianapolis, 2002 0 1 2 3 4 5 6 7 8 9 10 3/10/02 3/11/02 3/12/02 3/13/02 3/14/02 3/15/02 3/16/02 3/17/02 3/18/02 3/19/02 Onset Date Cases Other* Dietary Staff Other Staff Residents
  • 106. 107 • In this case, there are several peaks, and the incubation period cannot be identified. Continuing Common Source or Intermittent Exposure
  • 107. 108 Propagated Outbreaks Typical of person-to-person outbreaks Secondary cases appear one incubation period after peak of first wave Taller successive waves of cases
  • 108. 109 Propagated Outbreaks Onset Dates of Illness Indianapolis, 2000 0 1 2 3 4 5 6 7 8 11/21/00 11/22/00 11/23/00 11/24/00 11/25/00 11/26/00 11/27/00 11/28/00 11/29/00 11/30/00 12/1/00 Onset Date Cases Food Staff Medical Staff Residents
  • 110. 111
  • 112. 113 Place Spot maps Simple and effective Identifies- –Geographic extent of outbreak –Clustering or pattern
  • 113. 114 Spot Maps: Place One spot = case Community Facilities Recreational sites Population density not reflected
  • 114. 115 Time Draw epidemic curve No. of cases over time graphed by date or time of onset of symptoms Tells Us: “Where are we now?” “What’s the forecast?” Probable time of exposure Epidemic pattern
  • 116. 117 6.Develop Hypothesis Round up usual suspects! Type of agent Source of agent Mode of transmission Usual reservoirs Known risk factors Exposures that caused disease Look at person, place and time for clues Be able to test
  • 117. 118 Develop Hypothesis Requires familiarity with disease Hypothesis should be testable Still clueless? Talk with cases again Visit work sites or billeting area Don’t forget outliers
  • 118. 119 Developing Hypotheses Type of agent Source of agent Mode of transmission Exposures Be able to test
  • 120. 121 Analytic Epidemiology Quantify relationships between exposures and disease Test hypotheses about causes Comparison groups cohort study case-control study
  • 121. 122 Evaluate Hypothesis via Analytical Epidemiology Determine exposure variables. Compare ill to not ill. Construct a 2 X 2 table Perform Cohort or Case Control Study Use Cohort study when: - Population at risk is known (you have a denominator) Interview “ill” and “not ill” Calculate attack rates - “ate” v/s “didn’t eat” Put on food-specific attack rate table
  • 122. 123 Cohort Studies Defined population Can contact all in timely manner Calculate attack rate Calculate risk ratio to determine risk of contracting illness from exposure
  • 123. 124 Attack Rates Calculate for those ill and exposed and those ill and not exposed Number of new cases in population during period Population at risk x100 at beginning of period
  • 124. 125 Calculate attack rates Attack rate = (ill / ill + well) x 100 during a time period If there is an obvious commonality for the outbreak, calculate attack rates based on exposure status (a community picnic) If there is no obvious commonality for the outbreak, calculate attack rates based on specific demographic variables (hepatitis cases in a community)
  • 125. 126 Example: Calculation of A R for Food X Ate the food Did not eat the food Ill Well Total Attack Rate Ill Well Total Attack Rate 10 3 13 76% 7 4 11 64% Attack Rate = ill / (ill + Well) x 100 during a time period Attack rate = (10/13) x 100 = 76% (7/11) x 100 = 64%
  • 126. 127 Risk Ratios attack rate of ill and exposed a/(a+b) attack rate of ill, not exposed c/(c+d) >1.0 = increased risk 1.0 = same as chance <1.0 = decreased risk
  • 127. 128 Case-Control Studies Population not defined Select sample groups of cases and controls Calculate odds ratio to determine likelihood of contracting illness from exposure (see table 6.7)
  • 128. 129 Odds Ratios Cross multiply and divide a b c d ad bc >1.0 = increased likelihood 1.0 = same as chance <1.0 = decreased likelihood
  • 130. 131 Clinical Specimens Identifies agent and confirms cases Obtain results if already collected Collect specimens if necessary Type of specimen depends on suspected agent, nature of outbreak
  • 131. 132 Collect Clinical Specimens Containers available from ISDH to order call 317-233-8104 Must use containers in date! 7A: enteric bacteria, viruses 4A: parasites 5A: pertussis
  • 132. 133 Collect Clinical Specimens Specimens must be labeled with patient’s name and collection date Indicate on form that specimen is related to investigation
  • 133. 134 Collect Clinical Specimens Submission form(s) must be completed and enclosed with specimen Local health department should collect and transport specimens to ISDH lab
  • 134. 135 Environmental Investigation Help explain why outbreak occurred Begins when suspected mode of transmission identified Identifies vehicle of transmission Samples: food, water, air
  • 136. 137 Control Measures Aim at weakest link in infection cycle Epi Triad Infectious Agent Reservoir Susceptible Host
  • 137. 138 Possible Options Post-exposure prophylaxis/treatment Recalling/destroying food Providing educational information Closing an establishment Exclusion (work, daycare, school) Making public announcements
  • 138. 139 Media Relations Communication between ISDH and LHD extremely important LHD generally handles media calls within jurisdiction but ISDH can provide guidance All media calls to ISDH routed through Office of Public Affairs
  • 139. 140 Media Calls Confirm investigation underway Provide only confirmed or statistically proven information Be careful mentioning businesses Never speculate or provide identifiers Remain calm and do not be rushed
  • 142. 143 Purpose of Report Prevent similar outbreaks Identify trends/causal factors Justify resources used Serves as public record
  • 143. 144 Report Format Cover page in memo format Background Epidemiologic investigation Environmental assessment Laboratory results Conclusions
  • 145. 146 On Dec.31,2009, the local health officer of Jaipur, reported the occurrence of an outbreak of acute gastrointestinal illness to the District Health Officer. Dr. X, epidemiologist- in-training, was assigned to conduct an investigation. Investigating an Epidemic: The Dinner was held at Hotel . Food was prepared by Chefs of the Hotel. The Dinner began at 8:00 PM and continued until 11:00 PM.
  • 146. Investigating an Epidemic: 147 When Dr. X arrived in the field, he learned from the health officer that all persons known to be ill had attended a dinner at Hotel on Dec. 31, 2004 Family members who had not attended the Dinner had not become ill. Accordingly, the investigation was focused on the circumstances related to the supper.
  • 147. 148 148 Q: Is this an Epidemic? Endemic for the region? Due to seasonal variation? Due to random variation? What might be the agent? How is this agent transmitted? What am I looking for?
  • 148. 149 149 Verify the outbreak Determine whether there is an outbreak – an excess number of cases from what would be expected Establish a case definition Non-ambiguous (distinct/ clear) Clinical / diagnostic verification Person / Place / Time descriptions Identify and count cases of illness
  • 149. 150 Select the correct case definition and find the error in the others: 1. All Invitees in Dinner held in Hotel on Dec.31,2004 between 8:00 PM and 11:00 PM; whether they attended Dinner or not; whether they participated in food preparation, transport, or distribution or not; whether they ate or not. 2. Persons who developed acute gastrointestinal symptoms within 72 hours of eating supper and who were among Invitees in Dinner held in Hotel Clarks on Dec.31,2004. 3. Invitees who developed acute gastrointestinal symptoms within 24 hours of the Dinner held in Hotel on Dec.31,2004 between 8:00 PM and 11:00 PM
  • 150. 151 Select the correct case definition and find the error in the others: 1. All invitees to the Marriage Dinner held in Hotel on October 21, 2002between 8:00 PM and 11:00 PM; whether they attended Marriage or not; whether they participated in food preparation, transport, or distribution or not; whether they ate or not. Missing definition of sickness 2. Persons who developed acute gastrointestinal symptoms within 24 hours of eating Dinner on Dec.31,2004 and who were among invitees of the marriage dinner. CORRECT 3. Invitees who developed acute gastrointestinal symptoms within 24 hours Dinner on Dec.31,2004. Did not specify that they went to the dinner
  • 151. 152 Investigating an Epidemic: Interviews regarding the presence of symptoms, including the day and hour of onset, and the food consumed at the Dinner, were completed on 75 of the 80 persons known to have been present. A total of 46 persons who had experienced gastrointestinal illness were identified. 152
  • 152. 153 Menu: Baked Vegetable Malai paneer Dum Aaloo Cabbage salad Paneer Khumb Raita Missi Roti/ Plain Roti Raj bhog Coffee Water Cream salad Ice cream (van) Ice cream (choc) Fruit salad
  • 153. 154 Which menu item (s) is the potential culprit? To find out, calculate attack rates!
  • 154. Attack Rates among? The foods that have the greatest difference in the attack rates among who ate and who did not eat, may be the food(s) that were responsible for the illness. 155
  • 155. 156 Attack Rates by Items Served: Number of persons who ate specified item Number of persons who did not eat specified item ill Well Total Attack rate (%) ill Well Total Attack rate % Baked Vegetable 29 17 46 17 12 29 Malai paneer 26 17 43 20 12 32 Dum Aaloo 23 14 37 23 14 37 Cabbage salad 18 10 28 28 19 47 Paneer Khumb 16 7 23 30 22 52 Raita 21 16 37 25 13 38 Missi Roti 18 9 27 28 20 48 Raj bhog 2 2 4 44 27 71 Coffee 19 12 31 27 17 44 Water 13 11 24 33 18 51 Cream salad 27 13 40 19 16 35 Ice cream (van) 43 11 54 3 18 21 Ice cream (choc) 25 22 47 20 7 27 Fruit salad 4 2 6 42 27 69
  • 156. 157 Attack Rates by Items Served: Number of persons who ate specified item Number of persons who did not eat specified item Ill Well Total Attack rate (%) Ill Well Total Attack rate % Baked Vegetable 29 17 46 63 17 12 29 59 Malai paneer 26 17 43 60 20 12 32 62 Dum Aaloo 23 14 37 62 23 14 37 62 Cabbage salad 18 10 28 64 28 19 47 60 Paneer Khumb 16 7 23 70 30 22 52 58 Raita 21 16 37 57 25 13 38 66 Missi Roti 18 9 27 67 28 20 48 58 Raj bhog 2 2 4 50 44 27 71 62 Coffee 19 12 31 61 27 17 44 61 Water 13 11 24 54 33 18 51 65 Cream salad 27 13 40 67 19 16 35 54 Ice cream (van) 43 11 54 80 3 18 21 14 Ice cream (choc) 25 22 47 53 20 7 27 74 Fruit salad 4 2 6 67 42 27 69 61
  • 157. 158 Improper cooling of foods Improper cooking of foods Improper reheating of foods Improper holding temperature of foods Cross contamination Infected food handlers, poor employee hygiene Major Causes of Food borne Disease
  • 158. 159 Summary The Epi Approach... Identify a problem Investigate and collect data Describe data in terms of person, place and time Formulate a hypothesis Test your hypothesis
  • 159. 160 Bottom Line... Collect good descriptive data Be observant -- Be objective Keep Authority informed Be sure to collect data on both the “ill” and the “not ill” Ask for help Disease prevention!
  • 160. 161 Conclusion An attack of gastroenteritis occurred following a Dinner at Hotel Clarks. The cause of the outbreak was contaminated vanilla ice cream.