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Pathomation platform description 2020 slide share edition
- 1. Pathomation offers a software platform Pathomation doesn’t just build software; we offer organizations a complete platform-solution for their digital pathology and virtual microscopy. Let’s see what that means.
- 2. Digital pathology starts with slide scanners. Potentially many scanners, from many different vendors.
- 3. Local HDD Network UNC The resulting slides from these scanners can be stored on conventional storage media
- 4. Azure S3 Local HDD Network UNC Or in the cloud
- 5. Azure S3 Local HDD Network UNC PMA.core With Pathomation’s PMA.core, you can visualize any type of slide from any vendor stored on any type of media.
- 6. Azure S3 Local HDD Network UNC PMA.core Front-end PMA.UI framework PMA.core in turn offers a front- end visualization framework.
- 7. Azure S3 Local HDD Network UNC PMA.core Front-end PMA.UI frameworkBack-end connectivity SDK PMA.core also offers back-end connectivity
- 8. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK The front-end framework is written in JavaScript, and consists of several different components,
- 9. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport The front-end framework is written in JavaScript, and consists of several different components, including: • a viewport
- 10. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport Gallery The front-end framework is written in JavaScript, and consists of several different components, including: • a viewport • a gallery
- 11. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport TreeviewGallery The front-end framework is written in JavaScript, and consists of several different components, including: • a viewport • a gallery • a treeview
- 12. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport TreeviewGallery Webservice API PMA.core also a webservice-based API, which we exploit ourselves to provide several SDK for different programming languages.
- 13. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport TreeviewGallery Webservice API All our SDK are open source and available through GitHub.
- 14. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK Viewport TreeviewGallery Webservice API PMA.python We offer our SDK for • Python
- 15. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.java Viewport TreeviewGallery Webservice API We offer our SDK for • Python • Java
- 16. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Webservice API We offer our SDK for • Python • Java • PHP
- 17. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Applications Pathomation has built a number of standard applications that address different digital pathology scenarios out of the box.
- 18. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Applications PMA.view PMA.view is a viewer application that allows side-by-side grid placement, snapshot preparation, and slide sharing
- 19. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Pathomation Applications PMA.view PMA.studio PMA.studio is an upgrade from PMA.view. PMA.studio allows annotations, conferencing, and meta-data integration.
- 20. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Pathomation Applications PMA.view PMA.studio PMA.control PMA.control is a high-end training solution for healthcare professionals. One great way to get started with this is through the PathoTrainer program of our partner; HistoGeneX. See http://www.pathotrainer.com for more info
- 21. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery Pathomation Applications PMA.view PMA.studio PMA.control PMA.slidebox PMA.slidebox is a straightforward way to share static slide collections with students or organize conferences
- 22. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery In-house developed custom Applications Customers have also developed their own in-house applications, in diverse fields
- 23. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery In-house developed custom Applications QA Quality assurance and screening programs
- 24. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery In-house developed custom Applications QA Intranet People have also integrated Pathomation software components into their own intranet
- 25. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery In-house developed custom Applications QA Intranet Customer portal Customers have built customer portals for their own client-base
- 26. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery In-house developed custom Applications QA Intranet Customer portal IA workflows You can set up image analysis workflows for machine learning, deeplearning and computer vision on top of the Pathomation platform
- 27. Azure S3 Local HDD Network UNC PMA.core Front-end JavaScript PMA.UI frameworkBack-end connectivity SDK PMA.python PMA.phpPMA.java Viewport TreeviewGallery QA IntranetPMA.view PMA.studio In-house developed custom Applications Customer portal IA workflows Pathomation Applications PMA.control PMA.slidebox Whatever your digital pathology scenario, we got you covered!
- 28. PMA.start https://free.pathomation.com PMA.core and other applications https://www.pathomation.com My Pathomation https://my.pathomation.com info@pathomation.com PMA.start PMA.core My Pathomation
Editor's Notes
- Pathomation doesn’t just build software; we offer organizations a complete platform-solution for their digital pathology and virtual microscopy. Let’s see what that means.
- Digital pathology starts with slide scanners. Potentially many scanners, from many different vendors.
- The resulting slides from these scanners can be stored on conventional storage media
- Or in the cloud
- With Pathomation’s PMA.core, you can visualize any type of slide from any vendor stored on any type of media.
- PMA.core in turns offers both a front-end visualization framework.
- as well as back-end connectivity
- The front-end framework is written in JavaScript, and consists of several different components,
- including a viewport
- A gallery
- And a treeview
- PMA.core also a webservice-based API, which we exploit ourselves to provide several SDK for different programming languages.
- All our SDK are open source and available through GitHub.
- We offer our SDK for Python,
- Java
- And PHP
- Pathomation has built a number of standard applications that address different digital pathology scenarios out of the box.
- PMA.view is a viewer application that allows side-by-side grid placement, snapshot preparation, and slide sharing
- PMA.studio is an upgrade from PMA.view. PMA.studio allows annotations, conferencing, and meta-data integration.
- PMA.control is a high-end training solution for healthcare professionals. One great way to get started with this is through the PathoTrainer program of our partner; HistoGeneX.
- PMA.slidebox is a straightforward way to share static slide collections with students or organize conferences
- Customers have also developed their own in-house applications, in diverse fields including
- Quality assurance and screening programs
- People have also integrated Pathomation software components into their own intranet
- Customers have built customer portals for their own client-base
- You can set up image analysis workflows for machine learning, deeplearning and computer vision on top of the Pathomation platform
- Whatever your digital pathology scenario, we got you covered!
- Learn more? Visit our website at http://www.Pathomation.com, or contact us via email to get a free initial digital pathology consultation