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 Cell Wall
 Bacterial Cell Wall
1. Gram Negative Cell Wall
2. Gram Positive Cell Wall
 Eukaryotic Cell Wall
1. Fungal Cell Wall
2. Plant Cell Wall
 Extracellular Matrix
1. Collagen
2. Elastin
3. Glycoaminoglycans(GAGs)
4. Proteoglycans
5. Fibronectin
6. Laminins
 Cell wall was first observed and named
simply as a “wall” by Robert Hooke in
1665.
 In 1804, Karl Rudolphi and J.H.F. Link
proved that cells have independent cell
walls.
 A cell wall is a structural layer that
surrounds types of cells, situated outside
the cell membrane.
 It can be tough, flexible and rigid which
provides cell with both structural support
and protection.
 On the basis of chemical composition of
cell wall there are three types of cell
wall:
1) Bacterial Cell Wall: made up of
Mucopeptide and Muramic acid.
2) Cell wall of Fungi: made up of
Chitin.
3) Plant Cell wall: made up of
Cellulose.
 Major component is Peptidoglycan(strong
shell).
 Gram negative bacteria: thin
peptidoglycan layer(thin cell wall).
 Gram positive bacteria: thick
peptidoglycan layer(thick cell wall).
 Archeal cell wall lacks peptidoglycan.
It is composed of pseudopeptidoglycan,
sulfated polysaccharides,
glycoprotiens.
 Multi layered and more complex than
gram positive cell walls.
 Peptidoglycan of gram negative bacteria
is thin comprises only 10% or less of
cell wall.
 Outer membrane lies outside the thin
peptidoglycan layer.
 Most abundant protein is Braun’s
lipoprotein.
 Usually thick, homogenous, composed
mainly of peptidoglycan.
 It accounts 50- 90% of the dry weight
of the cell wall.
 Contain large amount of teichoic acids.
 Developed by Christian Gram in 1884.
https://www.youtube.com/watch?v=sxa46xKfIOY
Click on this video link below for a better
understanding of the procedure of gram staining
technique.
https://youtu.be/sxa46xKfIOY
 Peptidoglycan ,also known as murein, is a
polymer consisting of sugars and amino acids
that forms a mesh-like layer outside the cell
membrane of most bacteria forming cell wall.
 The sugars component consist of alternating
residues of β-(1,4) linked N- acetyl
glucosamine and N-acetylmuramic acid.
 These subunits which are related to glucose in
their structure are covalently joined to one
another to form glycan chains.
 Attached to the N- acetylmuramic acid is a
peptide chain of three to five amino acids.
The peptide chain can be cross- linked to the
peptide chain of another strand forming the
peptidoglycan.
 Composed of Chitin(polysaccharide)in fungi
and Cellulose(polymer)in plants.
 Both cellulose and chitin shows β-1,4
linkage.
 The cell wall is made up of :
1.Chitin (polymers of acetylated amino
sugar N-acetylglucosamine)
2.Glucans
3.Proteins
 Glucan and Chitin are components of the
primary wall.
 Proteins are components of the
secondary wall.
 Other components include chitosan,
melanins and lipids
Sec. Cell
wall
Pri. Cell
wall
 The plant cell wall composed of :
1.The Middle Lamella
2.The Primary Cell Wall
3.The Secondary Cell Wall
4.The Tertiary Cell Wall
 Middle lamella– first formed from cell
plate during cytokinesis.
 Primary cell wall- composed of cellulose
fibrils, produced at plasma membrane by
cellulose synthase complex.
 Microfibrils– held by hydrogen
bonds(tensile strength).
 Secondary cell wall– constructed between
plasma membrane and primary wall.
 Plasmodesmata– interconnecting channels of
cytoplasm that connect protoplasts.
1. Middle Lamella
 It is present between two adjacent
cells.
 It is situated outside primary cell
wall and is made up of calcium and
magnesium pectate.
 It acts as cement which holds the
adjacent cells together.
2. Primary Cell Wall
 It is formed after the middle lamella.
 A thin, flexible and extensible layer.
 It is capable of growth and expansion.
 The backbone of primary cell wall is
formed by the cellulose fibrils.
 The matrix is composed of hemicellulose,
pectin compounds, lipids, structural
proteins.
 Hemicelluloses are highly branched
polysaccharides that are H-bonded to
cellulose microfibrils into a tough fiber,
which is responsible for the mechanical
strength of plant cell wall.
• The cellulose microfibrils and
hemicelluloses are embedded in a gel-like
matrix formed by pectins, which are
branched polysaccharides containing a large
number of negatively-charged galacturonic
acid residues. Because of these multiple
negative charges, pectins bind positively-
charged ions(such as Ca2+)and trap water
molecules to form gels.
3. Secondary Cell Wall
 It is extremely rigid and provides
strength.
 It is not found in all cell types.
 It consists of three layers known as
S1(outer),S2(middle) and S3(inner).
 It is composed of cellulose,
hemicellulose and lignin.
 Lignin is a complex polymer of
hydrophobic phenolic residues, which
inserts into the spaces between the
other polymers. Lignin is responsible
for much of the strength and density of
wood.
4. Tertiary Cell Wall
 Tertiary cell wall is deposited in few
cells.
 It is considered to be dry residue of
protoplast .
 Besides cellulose and hemi-cellulose,
xylan is also present.
Plasmodesmata
 Plasmodesmata are protoplasmic strands
that connect the protoplasts of
neighboring cells.
 Diameter is 40-50 nm.
A brief explanation about cell wall.
 Many animal cells are intrinsically linked
to other cells and to the extracellular
matrix (ECM).
 Cell surface molecules bind to other
cells, or to other components of the ECM.
They also play a role in mutual
recognition of similar cell types.
 Bone and cartilage are mostly ECM plus a
very few cells. Connective tissue that
surrounds glands and blood vessels, is a
gelatinous matrix containing many
fibroblast cells.
The ECM contains 3 classes of molecules:
 Structural proteins (collagens and
elastins)
 Protein-polysaccharide complexes to embed
the structural proteins (proteoglycans)
 Adhesive glycoproteins to attach cells to
matrix (fibronectins and laminins).
 Most abundant protein in animals-25%
 Secreted mostly by connective tissue cell
and in small quantity by other cell
 Collagen contributes to the stability of
tissues and organs.
 It maintains their structural integrity.
 It has great tensile strength.
 The main component of fascia, cartilage,
ligaments, tendons, bone and skin.
 Plays an important role in cell
differentiation, polarity, movement.
 Plays an important role in tissue and
organ development.
 Human genome contains 42 distinct a-chain
genes (42 can undergo different combinations
 Less than 40 types of collagen found so far
 Triple helix of 3 α-chains
 α-chain structure Gly-X-Y repeats in a left
handed turn
 X frequently a proline
 Y frequently a hydroxylysine or hydroxyproline
(mostly)
 Proline and hydroxyproline makes the chain
more rigid
 The glycine because of its small nature is
able to be accommodated in the crowded helix
Prolyl
hydroxylase
 Several other types of
collagen do not form fibrils
but play distinct roles in
various kinds of
extracellular matrices.
 Type-IV collagen do not form
fibrils but form a mesh-like
network.
 Basal lamina form from
different types of collagen,
primarily type-IV collagen,
but also type VI and XVIII,
all of which are network-
forming collagens.
 Elastin is a major protein component of
tissues that require elasticity such as
arteries, lungs, bladder, skin and elastic
ligaments and cartilage.
 It is composed of soluble tropoelastin protein
containing primarily glycine and valine and
modified alanine and proline residues.
 It is secreted by connective tissue cells as
soluble tropoelastin into EC matrix.
 Forms cross linkages with each other-catalysed
by lysil oxidase
 Forms an extensive network of elastin fibres
and sheets
 Elastin fibres associate with microfibrils
made up of glycoproteins including fibrillin
 Polypeptide chains are cross-linked together
to form rubberlike, elastic fibers. Each
elastin molecule uncoils into a more extended
conformation when the fiber is stretched and
will recoil spontaneously as soon as the
stretching force is relaxed
 Many different genetic
types
 Triple helix
 (Gly-X-Y)n repeating
structure
 Presence of
hydroxylysine
Carbohydrate-containing
 Intramolecular aldol
cross-links
 Presence of extension
peptides during bio-
synthesis
 One genetic type
 No triple helix;
random coil
conformations
permitting stretching
 No (Gly-X-Y)n
repeating structure
 No hydroxylysine, No
carbohydrate
 Intramolecular
desmosine cross-links
 No extension peptides
present during
biosynthesis
Collagen Elastin
 Unbranched polysaccharide chains composed
of repeating dissacharide units.
 Negatively charged under physiological
conditions (due to the occurrence of
sulfate and uronic acid groups)
 Disaccharide subunits are:
1. Uronic acid
D-glucuronic acid or L-iduronic acid
2. Aminosugar
N-acetylglucosamin (GlcNAc) or
N-acetylgalactosamin (GalNAc)
 Amino sugars and uronic acids are the most
common building blocks of the
glycosaminoglycans.
 Amino sugars : -OH at C-2 is replaced by
an amino group. This amino group is most
often acetylated and sometimes sulfated.
 Uronic acids : C-6 of the hexose is
oxidized to a carboxyl group.
 Common sulfated GAGs are dermatan sulfate,
chondroitin sulfate, keratin sulfate, and
haparan sulfate.
(Exception: Hyaluronan is a non-sulfated GAG
and the only GAG that occurs as a single long
polysaccharide chain)
 Proteins linked covalently to
glycosaminoglycans (GAGs).
 Carbohydrates(polysaccharides) make up
about 95% of its weight.
 Proteins bound covalently to GAGs are
called core proteins.
 Many have been classified; they vary in
tissue of origin, function, core
protein types.
 Examples include aggrecans, syndecan,
betaglycan, serglycan.
 A number of
proteoglycans interact
with hyaluronan to
form large complexes
in the ECM. A well-
characterized example
is aggrecan, the major
proteoglycan of
cartilage.
 Principal adhesion protein of connective
tissues.
 Dimeric glycoprotein consisting of two
polypeptide chains , each containing nearly
2500 amino acids.
 Has binding sites for both collagen and
GAGs so it cross-links these matrix
components.
 Attached to cell membrane by membrane-
spanning receptor – integrin.
 Derived by alternative splicing of the mRNA
of a single gene.
 Laminins are cross- or T-shaped
heterotrimers of α,β,and γ subunits, which
are the products of five α genes, three β
genes, and three γ genes.
 Principal components of basal laminae.
 Like type-IV collagen, laminins can self-
assemble into meshlike networks.
 Laminins are tightly associated with another
adhesion protein, called nidogen, which also
binds to type-IV collagen.
 Laminin, nidogen, collagen, and the
proteoglycans form cross-linked networks
within basal laminae.
A brief explanation about extracellular matrix .
Cell walls and extracellular matrix

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Cell walls and extracellular matrix

  • 1.
  • 2.  Cell Wall  Bacterial Cell Wall 1. Gram Negative Cell Wall 2. Gram Positive Cell Wall  Eukaryotic Cell Wall 1. Fungal Cell Wall 2. Plant Cell Wall  Extracellular Matrix 1. Collagen 2. Elastin 3. Glycoaminoglycans(GAGs) 4. Proteoglycans 5. Fibronectin 6. Laminins
  • 3.  Cell wall was first observed and named simply as a “wall” by Robert Hooke in 1665.  In 1804, Karl Rudolphi and J.H.F. Link proved that cells have independent cell walls.  A cell wall is a structural layer that surrounds types of cells, situated outside the cell membrane.  It can be tough, flexible and rigid which provides cell with both structural support and protection.
  • 4.  On the basis of chemical composition of cell wall there are three types of cell wall: 1) Bacterial Cell Wall: made up of Mucopeptide and Muramic acid. 2) Cell wall of Fungi: made up of Chitin. 3) Plant Cell wall: made up of Cellulose.
  • 5.  Major component is Peptidoglycan(strong shell).  Gram negative bacteria: thin peptidoglycan layer(thin cell wall).  Gram positive bacteria: thick peptidoglycan layer(thick cell wall).  Archeal cell wall lacks peptidoglycan. It is composed of pseudopeptidoglycan, sulfated polysaccharides, glycoprotiens.
  • 6.  Multi layered and more complex than gram positive cell walls.  Peptidoglycan of gram negative bacteria is thin comprises only 10% or less of cell wall.  Outer membrane lies outside the thin peptidoglycan layer.  Most abundant protein is Braun’s lipoprotein.
  • 7.  Usually thick, homogenous, composed mainly of peptidoglycan.  It accounts 50- 90% of the dry weight of the cell wall.  Contain large amount of teichoic acids.
  • 8.
  • 9.  Developed by Christian Gram in 1884. https://www.youtube.com/watch?v=sxa46xKfIOY
  • 10. Click on this video link below for a better understanding of the procedure of gram staining technique. https://youtu.be/sxa46xKfIOY
  • 11.  Peptidoglycan ,also known as murein, is a polymer consisting of sugars and amino acids that forms a mesh-like layer outside the cell membrane of most bacteria forming cell wall.  The sugars component consist of alternating residues of β-(1,4) linked N- acetyl glucosamine and N-acetylmuramic acid.  These subunits which are related to glucose in their structure are covalently joined to one another to form glycan chains.  Attached to the N- acetylmuramic acid is a peptide chain of three to five amino acids. The peptide chain can be cross- linked to the peptide chain of another strand forming the peptidoglycan.
  • 12.
  • 13.  Composed of Chitin(polysaccharide)in fungi and Cellulose(polymer)in plants.  Both cellulose and chitin shows β-1,4 linkage.
  • 14.  The cell wall is made up of : 1.Chitin (polymers of acetylated amino sugar N-acetylglucosamine) 2.Glucans 3.Proteins  Glucan and Chitin are components of the primary wall.  Proteins are components of the secondary wall.  Other components include chitosan, melanins and lipids
  • 16.  The plant cell wall composed of : 1.The Middle Lamella 2.The Primary Cell Wall 3.The Secondary Cell Wall 4.The Tertiary Cell Wall
  • 17.  Middle lamella– first formed from cell plate during cytokinesis.  Primary cell wall- composed of cellulose fibrils, produced at plasma membrane by cellulose synthase complex.  Microfibrils– held by hydrogen bonds(tensile strength).  Secondary cell wall– constructed between plasma membrane and primary wall.  Plasmodesmata– interconnecting channels of cytoplasm that connect protoplasts.
  • 18. 1. Middle Lamella  It is present between two adjacent cells.  It is situated outside primary cell wall and is made up of calcium and magnesium pectate.  It acts as cement which holds the adjacent cells together.
  • 19. 2. Primary Cell Wall  It is formed after the middle lamella.  A thin, flexible and extensible layer.  It is capable of growth and expansion.  The backbone of primary cell wall is formed by the cellulose fibrils.  The matrix is composed of hemicellulose, pectin compounds, lipids, structural proteins.  Hemicelluloses are highly branched polysaccharides that are H-bonded to cellulose microfibrils into a tough fiber, which is responsible for the mechanical strength of plant cell wall.
  • 20. • The cellulose microfibrils and hemicelluloses are embedded in a gel-like matrix formed by pectins, which are branched polysaccharides containing a large number of negatively-charged galacturonic acid residues. Because of these multiple negative charges, pectins bind positively- charged ions(such as Ca2+)and trap water molecules to form gels.
  • 21.
  • 22. 3. Secondary Cell Wall  It is extremely rigid and provides strength.  It is not found in all cell types.  It consists of three layers known as S1(outer),S2(middle) and S3(inner).  It is composed of cellulose, hemicellulose and lignin.  Lignin is a complex polymer of hydrophobic phenolic residues, which inserts into the spaces between the other polymers. Lignin is responsible for much of the strength and density of wood.
  • 23.
  • 24. 4. Tertiary Cell Wall  Tertiary cell wall is deposited in few cells.  It is considered to be dry residue of protoplast .  Besides cellulose and hemi-cellulose, xylan is also present. Plasmodesmata  Plasmodesmata are protoplasmic strands that connect the protoplasts of neighboring cells.  Diameter is 40-50 nm.
  • 25.
  • 26. A brief explanation about cell wall.
  • 27.  Many animal cells are intrinsically linked to other cells and to the extracellular matrix (ECM).  Cell surface molecules bind to other cells, or to other components of the ECM. They also play a role in mutual recognition of similar cell types.  Bone and cartilage are mostly ECM plus a very few cells. Connective tissue that surrounds glands and blood vessels, is a gelatinous matrix containing many fibroblast cells.
  • 28. The ECM contains 3 classes of molecules:  Structural proteins (collagens and elastins)  Protein-polysaccharide complexes to embed the structural proteins (proteoglycans)  Adhesive glycoproteins to attach cells to matrix (fibronectins and laminins).
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  • 30.  Most abundant protein in animals-25%  Secreted mostly by connective tissue cell and in small quantity by other cell  Collagen contributes to the stability of tissues and organs.  It maintains their structural integrity.  It has great tensile strength.  The main component of fascia, cartilage, ligaments, tendons, bone and skin.  Plays an important role in cell differentiation, polarity, movement.  Plays an important role in tissue and organ development.
  • 31.  Human genome contains 42 distinct a-chain genes (42 can undergo different combinations  Less than 40 types of collagen found so far  Triple helix of 3 α-chains  α-chain structure Gly-X-Y repeats in a left handed turn  X frequently a proline  Y frequently a hydroxylysine or hydroxyproline (mostly)  Proline and hydroxyproline makes the chain more rigid  The glycine because of its small nature is able to be accommodated in the crowded helix
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  • 35.
  • 36.  Several other types of collagen do not form fibrils but play distinct roles in various kinds of extracellular matrices.  Type-IV collagen do not form fibrils but form a mesh-like network.  Basal lamina form from different types of collagen, primarily type-IV collagen, but also type VI and XVIII, all of which are network- forming collagens.
  • 37.  Elastin is a major protein component of tissues that require elasticity such as arteries, lungs, bladder, skin and elastic ligaments and cartilage.  It is composed of soluble tropoelastin protein containing primarily glycine and valine and modified alanine and proline residues.  It is secreted by connective tissue cells as soluble tropoelastin into EC matrix.  Forms cross linkages with each other-catalysed by lysil oxidase  Forms an extensive network of elastin fibres and sheets  Elastin fibres associate with microfibrils made up of glycoproteins including fibrillin
  • 38.  Polypeptide chains are cross-linked together to form rubberlike, elastic fibers. Each elastin molecule uncoils into a more extended conformation when the fiber is stretched and will recoil spontaneously as soon as the stretching force is relaxed
  • 39.  Many different genetic types  Triple helix  (Gly-X-Y)n repeating structure  Presence of hydroxylysine Carbohydrate-containing  Intramolecular aldol cross-links  Presence of extension peptides during bio- synthesis  One genetic type  No triple helix; random coil conformations permitting stretching  No (Gly-X-Y)n repeating structure  No hydroxylysine, No carbohydrate  Intramolecular desmosine cross-links  No extension peptides present during biosynthesis Collagen Elastin
  • 40.  Unbranched polysaccharide chains composed of repeating dissacharide units.  Negatively charged under physiological conditions (due to the occurrence of sulfate and uronic acid groups)  Disaccharide subunits are: 1. Uronic acid D-glucuronic acid or L-iduronic acid 2. Aminosugar N-acetylglucosamin (GlcNAc) or N-acetylgalactosamin (GalNAc)
  • 41.  Amino sugars and uronic acids are the most common building blocks of the glycosaminoglycans.  Amino sugars : -OH at C-2 is replaced by an amino group. This amino group is most often acetylated and sometimes sulfated.  Uronic acids : C-6 of the hexose is oxidized to a carboxyl group.  Common sulfated GAGs are dermatan sulfate, chondroitin sulfate, keratin sulfate, and haparan sulfate. (Exception: Hyaluronan is a non-sulfated GAG and the only GAG that occurs as a single long polysaccharide chain)
  • 42.
  • 43.  Proteins linked covalently to glycosaminoglycans (GAGs).  Carbohydrates(polysaccharides) make up about 95% of its weight.  Proteins bound covalently to GAGs are called core proteins.  Many have been classified; they vary in tissue of origin, function, core protein types.  Examples include aggrecans, syndecan, betaglycan, serglycan.
  • 44.
  • 45.  A number of proteoglycans interact with hyaluronan to form large complexes in the ECM. A well- characterized example is aggrecan, the major proteoglycan of cartilage.
  • 46.  Principal adhesion protein of connective tissues.  Dimeric glycoprotein consisting of two polypeptide chains , each containing nearly 2500 amino acids.  Has binding sites for both collagen and GAGs so it cross-links these matrix components.  Attached to cell membrane by membrane- spanning receptor – integrin.  Derived by alternative splicing of the mRNA of a single gene.
  • 47.  Laminins are cross- or T-shaped heterotrimers of α,β,and γ subunits, which are the products of five α genes, three β genes, and three γ genes.  Principal components of basal laminae.  Like type-IV collagen, laminins can self- assemble into meshlike networks.  Laminins are tightly associated with another adhesion protein, called nidogen, which also binds to type-IV collagen.  Laminin, nidogen, collagen, and the proteoglycans form cross-linked networks within basal laminae.
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  • 49. A brief explanation about extracellular matrix .