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Genetics
Themba Hospital FCOG(SA) Part 1 Tutorials
By Dr N.E Manana
Intro
• Genetics is the study of genes, heredity, and the variation of inherited
characteristics.
• Medical genetics deals with the etiology and pathogenesis of human
diseases that are at least partially genetic in origin, along with their
prediction and prevention
• Thus, it is closely linked to genomics, which is the study of how genes
function and interact.
• Genetic disease is common, between 2 and 3 percent of newborns
have a recognized structural defect.
GENOMICS IN OBSTETRICS
• Completed in 2003, the Human Genome Project identified nearly
25,000 human genes and led to rapid expansion of genomic research
to better understand disease biology
• HapMap investigates the nearly 10 million single nucleotide
polymorphisms that comprise 0.5 percent of our DNA
• Researchers look at how groups of common polymorphisms affect
factors such as propensity to particular diseases and response to
treatment
CHROMOSOMAL ABNORMALITIES
• Chromosomal abnormalities figure prominently in genetic disease.
• They are present in approximately 50 percent of spontaneous
abortions, 5 percent of stillbirths, and 0.5 percent of liveborn infants
• In the European Surveillance of Congenital Anomalies (EUROCAT)
network of population-based registries, chromosomal abnormalities
were recognized in 0.4 percent of pregnancies, with Down syndrome
comprising more than half of cases
• Table 13.1
• 13.2
Autosomal Trisomies
• Trisomy accounts for approximately half of all chromosomal
abnormalities
• In most cases, it results from nondisjunction, which is failure of
normal chromosomal pairing and separation during meiosis.
• Nondisjunction may occur if the chromosomes:
(1) Fail to pair up,
(2) Pair up properly but separate prematurely
(3) Fail to separate.
• The risk of any autosomal trisomy increases steeply with maternal
age, particularly after age 35
• Figure 13.1
Trisomy 21—Down Syndrome
• Fugure 13.3
Trisomy 21—Down Syndrome
• Down syndrome is the most common nonlethal trisomy.
• Its prevalence is approximately 1 per 500 recognized pregnancies,
including abortuses, stillbirths, and liveborn infants
• Approximately 30 percent of fetuses with Down syndrome are lost
between 12 and 40 weeks, and 20 percent between 16 and 40 weeks
• Rise in prevalence is explained by the increase in maternal age
distribution during this period.
• Adult women with Down syndrome are fertile, and a third of their
offspring will have Down syndrome
• Figure 13.4
Trisomy 18—Edwards Syndrome
• Figure 13.5
Trisomy 18—Edwards Syndrome
Clinical Findings
• Virtually every organ system can be affected by trisomy 18.
• Common major anomalies include heart defects in almost 95
percent—, as well as cerebellar vermian agenesis, enlarged cisterna
magna, myelomeningocele, diaphragmatic hernia, omphalocele,
imperforate anus, and renal anomalies such as horseshoe kidney
• Characteristic sonographic findings include a “strawberry-shaped”
cranium and choroid plexus cysts
• Pregnancies with trisomy 18 that reach the third trimester often
develop FGR, and the mean birthweight is less than 2500gram
Trisomy 13—Patau Syndrome.
• Constellation of fetal abnormalities and their association with another
autosomal trisomy was described by Patau and colleagues (1960)
• The prevalence of trisomy 13 is approximately 1 per 12,000 live births
and 1 per 5000 recognized pregnancies, which includes abortuses and
stillbirths
• As with trisomy 18, trisomy 13 is highly lethal, and most affected
fetuses are lost between 10 weeks and term
• Translocation is the most common structural chromosomal
rearrangement
• It is carried by approximately 1 in 1300 individuals, although the risk
of an affected liveborn infant is less than 2 percent
Trisomy 13—Patau Syndrome
• Few trisomy 13 fetuses survive until birth.
• Of those that do, the 1-week survival is approximately 40 percent,
and 1-year survival is only about 3 percent
• For the mother, trisomy 13 is the only aneuploidy linked with an
increased risk for preeclampsia.
Other Trisomies.
• In the absence of mosaicism, which is discussed below, it is rare for
other autosomal trisomies to result in a live birth.
• There are case reports of live births with trisomy 9 and with trisomy
22
Monosomy
• Nondisjunction creates an equal number of nullisomic and disomic
gamete
• As a rule, missing chromosomal material is more devastating than
having extra chromosomal material, and almost all monosomic
conceptuses are lost before implantation.
• The one exception is monosomy for the X chromosome, Turner
syndrome
• Despite the strong association between maternal age and trisomy,
there is no association between maternal age and monosomy
Polyploidy
• This is an abnormal number of complete haploid chromosomal sets.
• Polyploidy accounts for approximately 20 percent of spontaneous
abortions but is rarely encountered later in gestation.
• Triploid pregnancies have three haploid sets or 69 chromosomes
• Diandric triploidy accounts for most triploid conceptions, but the first-
trimester loss rate is extremely high.
• In a digynic triploid pregnancy, also known as type II triploidy, the
extra chromosomal set is maternal, and the egg fails to undergo the
first or second meiotic division before fertilization.
Sex Chromosome Abnormalities
45,X—Turner Syndrome
• This is the only monosomy compatible with life.
• However, it is also the most common aneuploidy in abortuses and
accounts for 20 percent of first-trimester losses.
• The prevalence of Turner syndrome is approximately 1 per 5000 live
births or 1 per 2500 girls
• The missing X chromosome is paternally derived in 80% of cases
• Monosomy X encompasses three distinct phenotypes.
Turner Syndrome
• Abnormalities associated with Turner syndrome include a major
cardiac malformation—such as coarctation of the aorta or bicuspid
aortic valve—in 30 to 50 percent
• Renal anomalies, particularly horseshoe kidney; and hypothyroidism
• Other features include short stature, broad chest with widely spaced
nipples, congenital lymphedema, webbed posterior neck (resulting
from cystic hygromas), and minor bone and cartilage abnormalities
• Intelligence is generally in the normal range, although affected
individuals are more likely to have visual spatial organization deficits
and difficulties with nonverbal problem solving and interpretation of
social cue
47,XXX
• Approximately 1 in 1000 female infants has an additional X
chromosome—47,XXX
• The extra X is maternally derived in more than 90% of cases
• Pubertal development and fertility are usually normal, although
premature ovarian failure has been reported
• Tall stature is common. The overall major malformation rate is not
increased with 47,XXX.
• That said, atypical phenotypic features have been described in some
individuals and include epicanthal folds, clinodactyly, hypotonia,
genitourinary problems, and seizure disorders
47,XXY—Klinefelter Syndrome
• This is the most common sex chromosome abnormality.
• It occurs in approximately 1 per 600 male infants.
• The additional X chromosome is maternally or paternally derived with
equal propensity
• There is also a slight association with either advanced maternal age or
advanced paternal age
• Infants with XXY appear phenotypically normal and usually do not have an
increased incidence of anomalies.
• As children, boys are typically tall and have normal prepubertal
development
• However, they have gonadal dysgenesis, do not undergo normal virilization,
and require testosterone supplementation beginning in adolescence.
47,XYY
• This aneuploidy occurs in approximately 1 in 1000 male infants
• There is no association with paternal age, anomaly rates are not increased,
and there are no unusual phenotypic features.
• These boys tend to be tall, they have normal puberty, and fertility is
unimpaired.
• They are at increased risk for oral and written language impairments, but
intelligence is generally normal
• A commonly held misconception was that XYY karyotype was associated
with criminal or violent behavior. However, these early reports have been
refuted
Abnormalities of Chromosome Structure
• Structural chromosomal abnormalities include deletions, duplications,
translocations, isochromosomes, inversions, ring chromosomes, and
mosaicism
• Their overall birth prevalence is approximately 0.3 percent
• Identification of a structural chromosomal abnormality raises two
primary questions.
• First, what phenotypic abnormalities or later developmental
abnormalities are associated with this finding?
• Second, is evaluation of parental karyotype indicated—specifically,
are the parents at increased risk to carry this abnormality?
• If so, what is their risk to have future affected offspring?
Deletions and Duplications
• A chromosomal deletion indicates that a portion of a chromosome is
missing, and a duplication means that a portion has been included
twice
• Deletions involving DNA segments large enough to be seen with
standard cytogenetic karyotyping are identified in approximately 1
per 7000 births
• Common deletions may be referred to by eponyms—for example, del
5p is called cri du chat syndrome.
• Most deletions and duplications occur during meiosis and result from
malalignment or mismatching during the pairing of homologous
chromosomes
• Figure 13.6
Microdeletion Syndromes
• A chromosomal deletion smaller than 3 million base pairs may not be
detectable with standard karyotyping.
• Termed microdeletions, these may require molecular cytogenetic
techniques for identification
• Despite the relatively small size, a microdeletion may involve a stretch
of DNA that contains multiple genes—causing a contiguous gene
syndrome, which can include serious but unrelated phenotypic
abnormalities
• When a specific microdeletion syndrome is suspected, it is usually
confirmed using fluorescence in situ hybridization
• Table 13.3
Chromosomal Translocations
• These are DNA rearrangements in which a segment of DNA breaks
away from one chromosome and attaches to another
• The rearranged chromosomes are called derivative (der)
chromosomes.
• There are two types—reciprocal and robertsonian translocation
• Reciprocal Translocations: A double-segment or reciprocal
translocation develops when there are breaks in two different
chromosomes and the broken fragments are exchanged
• Balanced translocation carriers are at risk to produce unbalanced
gametes that result in abnormal offspring
• Figure 13.7
Chromosomal Translocations
Robertsonian Translocations
• These involve only acrocentric chromosomes, which are
chromosomes 13, 14, 15, 21, and 22.
• In an acrocentric chromosome, the p arm is extremely short.
• In a robertsonian translocation, the q arms of two acrocentric
chromosomes fuse at one centromere to form a derivative
chromosome
• Robertsonian translocations are found in approximately 1 per 1000
newborns.
Chromosomal Inversions
• When there are two breaks in the same chromosome, and the intervening
genetic material is inverted before the breaks are repaired, the result is a
chromosomal inversion
• Although no genetic material is lost or duplicated, the rearrangement may
alter gene function.
• There are two types—pericentric and paracentric
• If there are breaks in both the p and q arms of a chromosome, such that
the inverted material includes the centromere, the inversion is pericentric
• If there are two breaks within one arm of a chromosome, and the inverted
material does not include the centromere, the inversion is paracentric
Chromosomal Mosaicism
• A mosaic individual has two or more cytogenetically distinct cell lines
that are derived from a single zygote.
• Phenotypic expression of mosaicism depends on several factors,
including whether the cytogenetically abnormal cells involve the
placenta, the fetus, part of the fetus, or some combination
• For example, mosaicism found in cells from amnionic fluid culture
does not always reflect the fetal chromosome complement
MODES OF INHERITANCE
Monogenic (Mendelian) Inheritance
• A monogenic disorder is caused by a mutation or alteration in a single locus
or gene in one or both members of a gene pair
• Heterogeneity. Genetic heterogeneity explains how different genetic
mechanisms can result in the same phenotype
Autosomal Dominant Inheritance
• If only one member of a gene pair determines the phenotype, that gene is
considered to be dominant.
• Carriers have a 50-percent chance of passing on the affected gene with
each conception.
• Penetrance.
• This term describes whether or not a dominant gene is expressed at all.
• Table 13.5
• Figure 13.9
• Table 13.8
Thank you

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5. Genetics.pptx

  • 1. Genetics Themba Hospital FCOG(SA) Part 1 Tutorials By Dr N.E Manana
  • 2. Intro • Genetics is the study of genes, heredity, and the variation of inherited characteristics. • Medical genetics deals with the etiology and pathogenesis of human diseases that are at least partially genetic in origin, along with their prediction and prevention • Thus, it is closely linked to genomics, which is the study of how genes function and interact. • Genetic disease is common, between 2 and 3 percent of newborns have a recognized structural defect.
  • 3. GENOMICS IN OBSTETRICS • Completed in 2003, the Human Genome Project identified nearly 25,000 human genes and led to rapid expansion of genomic research to better understand disease biology • HapMap investigates the nearly 10 million single nucleotide polymorphisms that comprise 0.5 percent of our DNA • Researchers look at how groups of common polymorphisms affect factors such as propensity to particular diseases and response to treatment
  • 4. CHROMOSOMAL ABNORMALITIES • Chromosomal abnormalities figure prominently in genetic disease. • They are present in approximately 50 percent of spontaneous abortions, 5 percent of stillbirths, and 0.5 percent of liveborn infants • In the European Surveillance of Congenital Anomalies (EUROCAT) network of population-based registries, chromosomal abnormalities were recognized in 0.4 percent of pregnancies, with Down syndrome comprising more than half of cases
  • 7. Autosomal Trisomies • Trisomy accounts for approximately half of all chromosomal abnormalities • In most cases, it results from nondisjunction, which is failure of normal chromosomal pairing and separation during meiosis. • Nondisjunction may occur if the chromosomes: (1) Fail to pair up, (2) Pair up properly but separate prematurely (3) Fail to separate. • The risk of any autosomal trisomy increases steeply with maternal age, particularly after age 35
  • 10. Trisomy 21—Down Syndrome • Down syndrome is the most common nonlethal trisomy. • Its prevalence is approximately 1 per 500 recognized pregnancies, including abortuses, stillbirths, and liveborn infants • Approximately 30 percent of fetuses with Down syndrome are lost between 12 and 40 weeks, and 20 percent between 16 and 40 weeks • Rise in prevalence is explained by the increase in maternal age distribution during this period. • Adult women with Down syndrome are fertile, and a third of their offspring will have Down syndrome
  • 13. Trisomy 18—Edwards Syndrome Clinical Findings • Virtually every organ system can be affected by trisomy 18. • Common major anomalies include heart defects in almost 95 percent—, as well as cerebellar vermian agenesis, enlarged cisterna magna, myelomeningocele, diaphragmatic hernia, omphalocele, imperforate anus, and renal anomalies such as horseshoe kidney • Characteristic sonographic findings include a “strawberry-shaped” cranium and choroid plexus cysts • Pregnancies with trisomy 18 that reach the third trimester often develop FGR, and the mean birthweight is less than 2500gram
  • 14. Trisomy 13—Patau Syndrome. • Constellation of fetal abnormalities and their association with another autosomal trisomy was described by Patau and colleagues (1960) • The prevalence of trisomy 13 is approximately 1 per 12,000 live births and 1 per 5000 recognized pregnancies, which includes abortuses and stillbirths • As with trisomy 18, trisomy 13 is highly lethal, and most affected fetuses are lost between 10 weeks and term • Translocation is the most common structural chromosomal rearrangement • It is carried by approximately 1 in 1300 individuals, although the risk of an affected liveborn infant is less than 2 percent
  • 15. Trisomy 13—Patau Syndrome • Few trisomy 13 fetuses survive until birth. • Of those that do, the 1-week survival is approximately 40 percent, and 1-year survival is only about 3 percent • For the mother, trisomy 13 is the only aneuploidy linked with an increased risk for preeclampsia. Other Trisomies. • In the absence of mosaicism, which is discussed below, it is rare for other autosomal trisomies to result in a live birth. • There are case reports of live births with trisomy 9 and with trisomy 22
  • 16. Monosomy • Nondisjunction creates an equal number of nullisomic and disomic gamete • As a rule, missing chromosomal material is more devastating than having extra chromosomal material, and almost all monosomic conceptuses are lost before implantation. • The one exception is monosomy for the X chromosome, Turner syndrome • Despite the strong association between maternal age and trisomy, there is no association between maternal age and monosomy
  • 17. Polyploidy • This is an abnormal number of complete haploid chromosomal sets. • Polyploidy accounts for approximately 20 percent of spontaneous abortions but is rarely encountered later in gestation. • Triploid pregnancies have three haploid sets or 69 chromosomes • Diandric triploidy accounts for most triploid conceptions, but the first- trimester loss rate is extremely high. • In a digynic triploid pregnancy, also known as type II triploidy, the extra chromosomal set is maternal, and the egg fails to undergo the first or second meiotic division before fertilization.
  • 18. Sex Chromosome Abnormalities 45,X—Turner Syndrome • This is the only monosomy compatible with life. • However, it is also the most common aneuploidy in abortuses and accounts for 20 percent of first-trimester losses. • The prevalence of Turner syndrome is approximately 1 per 5000 live births or 1 per 2500 girls • The missing X chromosome is paternally derived in 80% of cases • Monosomy X encompasses three distinct phenotypes.
  • 19. Turner Syndrome • Abnormalities associated with Turner syndrome include a major cardiac malformation—such as coarctation of the aorta or bicuspid aortic valve—in 30 to 50 percent • Renal anomalies, particularly horseshoe kidney; and hypothyroidism • Other features include short stature, broad chest with widely spaced nipples, congenital lymphedema, webbed posterior neck (resulting from cystic hygromas), and minor bone and cartilage abnormalities • Intelligence is generally in the normal range, although affected individuals are more likely to have visual spatial organization deficits and difficulties with nonverbal problem solving and interpretation of social cue
  • 20. 47,XXX • Approximately 1 in 1000 female infants has an additional X chromosome—47,XXX • The extra X is maternally derived in more than 90% of cases • Pubertal development and fertility are usually normal, although premature ovarian failure has been reported • Tall stature is common. The overall major malformation rate is not increased with 47,XXX. • That said, atypical phenotypic features have been described in some individuals and include epicanthal folds, clinodactyly, hypotonia, genitourinary problems, and seizure disorders
  • 21. 47,XXY—Klinefelter Syndrome • This is the most common sex chromosome abnormality. • It occurs in approximately 1 per 600 male infants. • The additional X chromosome is maternally or paternally derived with equal propensity • There is also a slight association with either advanced maternal age or advanced paternal age • Infants with XXY appear phenotypically normal and usually do not have an increased incidence of anomalies. • As children, boys are typically tall and have normal prepubertal development • However, they have gonadal dysgenesis, do not undergo normal virilization, and require testosterone supplementation beginning in adolescence.
  • 22. 47,XYY • This aneuploidy occurs in approximately 1 in 1000 male infants • There is no association with paternal age, anomaly rates are not increased, and there are no unusual phenotypic features. • These boys tend to be tall, they have normal puberty, and fertility is unimpaired. • They are at increased risk for oral and written language impairments, but intelligence is generally normal • A commonly held misconception was that XYY karyotype was associated with criminal or violent behavior. However, these early reports have been refuted
  • 23. Abnormalities of Chromosome Structure • Structural chromosomal abnormalities include deletions, duplications, translocations, isochromosomes, inversions, ring chromosomes, and mosaicism • Their overall birth prevalence is approximately 0.3 percent • Identification of a structural chromosomal abnormality raises two primary questions. • First, what phenotypic abnormalities or later developmental abnormalities are associated with this finding? • Second, is evaluation of parental karyotype indicated—specifically, are the parents at increased risk to carry this abnormality? • If so, what is their risk to have future affected offspring?
  • 24. Deletions and Duplications • A chromosomal deletion indicates that a portion of a chromosome is missing, and a duplication means that a portion has been included twice • Deletions involving DNA segments large enough to be seen with standard cytogenetic karyotyping are identified in approximately 1 per 7000 births • Common deletions may be referred to by eponyms—for example, del 5p is called cri du chat syndrome. • Most deletions and duplications occur during meiosis and result from malalignment or mismatching during the pairing of homologous chromosomes
  • 26. Microdeletion Syndromes • A chromosomal deletion smaller than 3 million base pairs may not be detectable with standard karyotyping. • Termed microdeletions, these may require molecular cytogenetic techniques for identification • Despite the relatively small size, a microdeletion may involve a stretch of DNA that contains multiple genes—causing a contiguous gene syndrome, which can include serious but unrelated phenotypic abnormalities • When a specific microdeletion syndrome is suspected, it is usually confirmed using fluorescence in situ hybridization
  • 28. Chromosomal Translocations • These are DNA rearrangements in which a segment of DNA breaks away from one chromosome and attaches to another • The rearranged chromosomes are called derivative (der) chromosomes. • There are two types—reciprocal and robertsonian translocation • Reciprocal Translocations: A double-segment or reciprocal translocation develops when there are breaks in two different chromosomes and the broken fragments are exchanged • Balanced translocation carriers are at risk to produce unbalanced gametes that result in abnormal offspring
  • 30. Chromosomal Translocations Robertsonian Translocations • These involve only acrocentric chromosomes, which are chromosomes 13, 14, 15, 21, and 22. • In an acrocentric chromosome, the p arm is extremely short. • In a robertsonian translocation, the q arms of two acrocentric chromosomes fuse at one centromere to form a derivative chromosome • Robertsonian translocations are found in approximately 1 per 1000 newborns.
  • 31. Chromosomal Inversions • When there are two breaks in the same chromosome, and the intervening genetic material is inverted before the breaks are repaired, the result is a chromosomal inversion • Although no genetic material is lost or duplicated, the rearrangement may alter gene function. • There are two types—pericentric and paracentric • If there are breaks in both the p and q arms of a chromosome, such that the inverted material includes the centromere, the inversion is pericentric • If there are two breaks within one arm of a chromosome, and the inverted material does not include the centromere, the inversion is paracentric
  • 32. Chromosomal Mosaicism • A mosaic individual has two or more cytogenetically distinct cell lines that are derived from a single zygote. • Phenotypic expression of mosaicism depends on several factors, including whether the cytogenetically abnormal cells involve the placenta, the fetus, part of the fetus, or some combination • For example, mosaicism found in cells from amnionic fluid culture does not always reflect the fetal chromosome complement
  • 33. MODES OF INHERITANCE Monogenic (Mendelian) Inheritance • A monogenic disorder is caused by a mutation or alteration in a single locus or gene in one or both members of a gene pair • Heterogeneity. Genetic heterogeneity explains how different genetic mechanisms can result in the same phenotype Autosomal Dominant Inheritance • If only one member of a gene pair determines the phenotype, that gene is considered to be dominant. • Carriers have a 50-percent chance of passing on the affected gene with each conception. • Penetrance. • This term describes whether or not a dominant gene is expressed at all.

Editor's Notes

  1. In another 3 percent of individuals, a defect is diagnosed by age 5, and another 8 to 10 percent are discovered by age 18 to have one or more functional or developmental abnormalities, two thirds of the population will experience a disease with a genetic component during their lifetime. Advances in genomics are used increasingly to provide information regarding susceptibility to genetic diseases, and there is every indication that this field will reshape prenatal diagnosis (Bodurtha, 2012).
  2. One example is the International HapMap (Haplotype Map) Project, which studies the effects of genetic variation Another example is dbGaP, the database of Genotypes and Phenotypes, which is maintained by the National Center for Biotechnology Information (NCBI) (2013a). This database includes studies of genotype and phenotype interactions, such as genome-wide association studies and medical diagnostic assays. It is hoped that data from dbGaP will be used to develop tests or products that address public health needs.
  3. Standard Nomenclature In humans, the 22 pairs of autosomes and one pair of sex chromosomes may be affected by various abnormalities. Karyotypes are described using the International System for Human Cytogenetic Nomenclature, a standardized format agreed upon by the genetics community Abnormalities fall into two broad categories—those of chromosome number, such as trisomy, and those of chromosome structure, such as a deletion or translocation. Each chromosome has a short arm, termed the “p” or petit arm, and a long arm known as the “q” arm, selected because it is the next letter of the alphabet. The two arms are separated by the centromere When reporting a karyotype, the total number of chromosomes is listed first, corresponding to the number of centromeres. This is followed by the sex chromosomes, XX or XY, and then by a description of any structural variation. Specific abnormalities are indicated by standard abbreviations, such as del (deletion) and inv (inversion). The affected region or bands of the p or q arms are then designated, so that the reader will know both the exact abnormality location and the way in which the chromosomal complement is abnormal. Some examples of standard karyotype nomenclature are shown in Table 13-1.
  4. Abnormalities of Chromosome Number The most easily recognized chromosomal abnormalities are numerical. Aneuploidy is inheritance of either an extra chromosome—resulting in trisomy, or loss of a chromosome— monosomy. These differ from polyploidy, which is an abnormal number of haploid chromosome sets, such as triploidy. The estimated incidence of various numerical chromosomal abnormalities is shown in Table 13-2.
  5. Aging is thought to break down the chiasmata that keep the paired chromosomes aligned. Oocytes are held suspended in midprophase of meiosis I from birth until ovulation, in some cases for 50 years. Following completion of meiosis at the time of ovulation, nondisjunction will result in one gamete having two copies of the affected chromosome, leading to trisomy if fertilized. The other gamete, receiving no copy of the affected chromosome, will be monosomic if fertilized. Between 10  and 20 percent of oocytes are aneuploid secondary to meiotic errors, compared with 3 to 4 percent of sperm. Although each chromosome pair is equally likely to have a segregation error, it is rare for trisomies other than 21, 18, or 13 to result in a term pregnancy Following a pregnancy with an autosomal trisomy, the risk for any autosomal trisomy in a future pregnancy is approximately 1 percent until the woman’s age-related risk exceeds this. Parental chromosomal studies are not indicated unless Down syndrome was due to an unbalanced translocation.
  6. In 1866, J. L. H. Down described a group of mentally retarded children with distinctive physical features. Nearly 100 years later, Lejeune (1959) demonstrated that Down syndrome is caused by an autosomal trisomy. Trisomy 21 is the etiology of 95 percent of Down syndrome cases, whereas 3 to 4 percent is due to a robertsonian translocation. The remaining 1 to 2 percent is secondary to an isochromosome or mosaicism. The nondisjunction that results in trisomy 21 occurs during meiosis I in almost 75 percent of cases. The remaining events occur during meiosis II.
  7. Males with Down syndrome are almost always sterile because of markedly decreased spermatogenesis As a result, Down syndrome is found in 1 per 740 live births in the United States or 13.5 per 10,000. This represents an increase of approximately 33 percent compared with the rate in the late 1970s (Parker, 2010; Shin, 2009). Clinical Findings It is estimated that 25 to 30 percent of second-trimester fetuses with Down syndrome will have a major malformation that can be identified sonographically Approximately 40 percent of liveborn infants with Down syndrome are found to have cardiac defects, particularly endocardial cushion defects and ventricular septal defects Gastrointestinal abnormalities develop in 7 percent and include duodenal atresia, esophageal atresia, and Hirschsprung disease
  8. Typical findings include brachycephaly; epicanthal folds and up-slanting palpebral fissures; Brushfield spots, which are grayish spots on the periphery of the iris; a flat nasal bridge; and hypotonia. Infants often have loose skin at the nape of the neck, short fingers, a single palmar crease, hypoplasia of the middle phalanx of the fifth finger, and a prominent space or “sandal-toe gap” between the first and second toes. Some of these findings are sonographic markers for Down syndrome, Health problems more common in children with Down syndrome include hearing loss in 75 percent, severe optical refractive errors in 50 percent, cataracts in 15 percent, thyroid disease in 15 percent, and an increased incidence of leukemia The degree of mental impairment is usually mild to moderate, with an average intelligence quotient (IQ) score of 35 to 70. Social skills in affected children are often higher than predicted by their IQ scores Recent data suggest that approximately 95 percent of liveborn infants with Down syndrome survive the first year. The 10-year survival rate is at least 90 percent overall and is 99 percent if major malformations are absent
  9. This constellation of abnormalities and their association with another autosomal trisomy was first described by Edwards (1960). In population-based series, prevalence of trisomy 18 is approximately 1 per 2000 recognized pregnancies—including abortuses, stillbirths, and live births, and approximately 1 per 6600 liveborn infants The difference in prevalence is explained by the high in-utero lethality of the condition, as 85 percent of trisomy 18 fetuses are lost between 10 weeks’ gestation and term Perhaps not surprisingly, survival of liveborn infants is likewise bleak. More than half die within the first week, and the 1-year survival rate is only approximately 2 percent The syndrome is three- to fourfold more common in females (Lin, 2006; Rosa, 2011). Unlike Down and Patau syndromes, which involve acrocentric chromosomes and thus may stem from a robertsonian translocation, it is uncommon for Edwards syndrome to result from a chromosomal rearrangement.
  10. Cranial and extremity abnormalities are also particularly common and include a prominent occiput, posteriorly rotated and malformed ears, micrognathia, small mouth, clenched hands with overlapping digits, radial aplasia, hypoplastic nails, and rockerbottom or clubbed feet In otherwise low-risk pregnancies, the risk for trisomy 18 is increased only when a choroid plexus cyst is associated with other abnormalities. Alone, this cyst may be considered a normal variant. Mode of delivery should be discussed in advance, because abnormal fetal heart rate tracings are common during labor. In older reports, more than half of undiagnosed fetuses underwent cesarean delivery for “fetal distress”
  11. Approximately 80 percent of pregnancies with Patau syndrome result from trisomy 13. The remainder are caused by a robertsonian translocation involving chromosomes 13 and 14, der(13;14)(q10;q10). Clinical Findings. Trisomy 13 is associated with abnormalities of virtually every organ system. One characteristic finding is holoprosencephaly. This is present in approximately two thirds of cases and may be accompanied by microcephaly, hypotelorism, and nasal abnormalities that range from a single nostril to a proboscis Cardiac defects are found in up to 90 percent of fetuses with trisomy 13 Other abnormalities that suggest trisomy 13 include neural-tube defects—particularly cephalocele, microphthalmia, cleft lippalate, omphalocele, cystic renal dysplasia, polydactyly, rockerbottom feet, and areas of skin aplasia For the fetus or infant with a cephalocele, cystic kidneys, and polydactyly, the differential diagnosis includes trisomy 13 and the autosomalrecessive Meckel-Gruber syndrome, which is lethal. Sonographic images of several of these abnormalities are shown in Chapter 10 (p. 201).
  12. Hyperplacentosis and preeclampsia develop in up to half of pregnancies with trisomy 13 carried beyond the second trimesterTrisomy 16 is the most common trisomy found with first-trimester losses, accounting for 16 percent, but it is not identified later in gestation. Trisomy 1 has never been reported.
  13. To have three haploid chromosomal sets, one parent must contribute two sets, and the phenotypic presentation differs according to the parent of origin. In diandric triploidy, also known as type I triploidy, the extra chromosomal set is paternal, resulting from fertilization of one egg by two sperm or by a single diploid—and thus abnormal—sperm. As a result, two thirds of triploid pregnancies identified beyond the first trimester are caused instead by digynic triploid Digynic triploid placentas do not develop molar changes. However, the fetus often displays asymmetric growth restriction Triploidy is a lethal aneuploidy, and more than 90 percent of fetuses with either the diandric or digynic form have multiple structural anomalies. These include abnormalities of the central nervous system, heart, face, and extremities, as well as severe growth restriction Counseling, prenatal diagnosis, and delivery options are similar to those for trisomies 18 and 13. The recurrence risk for a woman whose triploid fetus survived past the first trimester is 1 to 1.5 percent, and thus prenatal diagnosis is offered in future pregnancies Tetraploid pregnancies have 4 haploid sets or 92 chromosomes. Four sets of chromosomes results in either 92,XXXX or 92,XXYY. This suggests a postzygotic failure to complete an early cleavage division. The conceptus invariably succumbs, and the recurrence risk is minimal
  14. Approximately 98 percent of these conceptuses are so abnormal that they abort early in the first trimester In a second group, large cystic hygromas are identified in either the first or second trimester, frequently accompanied by hydrops In such cases, fetal demise almost invariably results. Only the third and leastcommon phenotype has the potential for postnatal survival Affected fetuses may have small cystic hygromas visible in the first or second trimester, which do not result in hydrops, and they often have other major abnormalities. One reason for the wide range of Turner syndrome phenotype is that only half of liveborn infants actually have monosomy X. Approximately one fourth have mosaicism, such as 45,X/46,XX or 45,X/46,XY. Another 15 percent have isochromosome X, that is, 46,X,i(Xq)(Milunsky, 2004; Nussbaum, 2007)
  15. Growth hormone is typically administered in childhood to ameliorate short stature (Kappelgaard, 2011). More than 90 percent have ovarian dysgenesis and require estrogen repletion beginning just before adolescence An exception is if a mosaicism involves a Y chromosome. Such cases are at risk for germ cell neoplasm—regardless of whether the child is phenotypically male or female, and eventual prophylactic bilateral gonadectomy is indicated
  16. Attention deficit disorder and delays in language development and motor skills have also been reported (Linden, 2002). It is estimated that because of the variability in presentation and subtlety of abnormal findings, only 10 percent of affected children are ascertained clinicall Females with two or more extra X chromosomes— 48,XXXX or 49,XXXXX—are likely to have physical abnormalities apparent at birth. These abnormal X complements are associated with varying degrees of mental retardation. For both males and females, the IQ score is lower with each additional X chromosome.
  17. They may develop gynecomastia In general, IQ scores are within the normal range but slightly below those of siblings, and delays in speech, reading, and motor skills are not uncommon
  18. Males with more than two Y chromosomes—48,XYYY— or with both additional X and Y chromosomes—48,XXYY or 49,XXXYY—have obvious physical abnormalities and significant mental retardation.
  19. When this happens, the misaligned segment may be deleted (Fig. 13-6). Or, if the mismatch remains when the two chromosomes recombine, it may result in a deletion in one chromosome and a duplication in the other. When a deletion or duplication is identified in a fetus or infant, the parents should be offered karyotyping to determine if either carries a balanced translocation—as this would significantly increase the recurrence risk.
  20. The region of DNA that is deleted in a microdeletion syndrome (or duplicated in a microduplication) is termed a genomic copy number variant Use of array-based technology has identified copy number variants that result in previously uncharacterized microdeletion syndromes—including single gene and intragenic deletions
  21. Microduplication Syndromes. These syndromes are caused by duplication of DNA regions smaller than 3 million base pairs. In some cases, a microduplication may involve the exact DNA region that causes a recognized microdeletion syndrome. Examples of these include the velocardiofacial, Smith-Magenis, and Williams-Beuren syndromes
  22. Reciprocal Translocations each affected chromosome contains a fragment of the other. If no chromosomal material is gained or lost in this process, the translocation is considered balanced The prevalence of reciprocal translocations is approximately 1 per 600 births (Nussbaum, 2007). Although transposition of chromosomal segments can cause abnormalities—due to repositioning of specific genes— the balanced carrier is usually phenotypically normal. The risk of a major structural or developmental abnormality in an apparent balanced translocation carrier is approximately 6 percent. Interestingly, using microarray-based studies, as many as 20 percent of individuals who would otherwise appear to have a balanced translocation may have missing or redundant DNA segments that are below the resolution of a standard karyotype
  23. As shown in Figure 13-7, if an oocyte or sperm contains a translocated chromosome, fertilization results in an unbalanced translocation— monosomy for part of one affected chromosome and trisomy for part of the other The observed risk of a specific translocation can often be estimated by a genetic counselor. In general, translocation carriers identified after the birth of an abnormal child have a 5- to 30-percent risk of having liveborn offspring with unbalanced chromosomes Carriers identified for other reasons, for example, during an infertility evaluation, have only a 5-percent risk. This is probably because the gametes are so abnormal that conceptions are nonviable
  24. As these are present in multiple copies on other acrocentric chromosomes, the translocation carrier is usually phenotypically normal. Because the number of centromeres determines the chromosome count, a robertsonian translocation carrier has only 45 chromosomes. Also, one centromere and the p arms of each chromosome are lost. The p arms contain the satellite regions, which contain only genes coding for ribosomal RNA Balanced carriers have reproductive difficulties for a number of reasons. If the fused chromosomes are homologous, from the same chromosome pair, the carrier can produce only unbalanced gametes. Each egg or sperm contains either both copies of the translocated chromosome, which would result in trisomy if fertilized, or no copy, which would result in monosomy. If the fused chromosomes are nonhomologous, four of the six possible gametes would be abnormal.
  25. Pericentric Inversion This causes problems in chromosomal alignment during meiosis and confers significant risk for the carrier to produce abnormal gametes and abnormal offspring. In general, the observed risk of abnormal offspring in a pericentric inversion carrier is 5 to 10 percent if ascertainment was made after the birth of an abnormal child. However, the risk is only 1 to 3 percent if prompted by another indication. An important exception is a pericentric inversion on chromosome 9—inv(9)(p11q12), which is a normal variant present in approximately 1 percent of individuals. Paracentric Inversion. The carrier makes either normal balanced gametes or gametes that are so abnormal as to preclude fertilization. Thus, although infertility may be a problem, the risk of having an abnormal offspring is extremely low If deletions occur at both ends of the same chromosome, the ends may come together to form a ring chromosome The regions at the end of each chromosome are called telomeres and contain specialized nucleoprotein complexes that stabilize chromosomes. If only telomeres are lost, all necessary genetic material is retained, so the carrier is essentially balanced. With deletions extending more proximally than the telomeres, the carrier is likely to be phenotypically abnormal. An example of this is a ring X chromosome, which may result in Turner syndrome. Ring chromosome carriers have reproductive difficulties. The ring prevents normal chromosome alignment during meiosis and thus produces abnormal gametes. It also disrupts cell division, which may cause abnormal tissue growth and lead to short stature, borderline to moderate mental deficiency, and minor dysmorphisms. A ring chromosome may form de novo or may be inherited from a carrier parent. Parent-to-child transmission is always maternal, possibly because of compromised spermatogenesis.
  26. When the abnormal cells are present in only a single flask of amnionic fluid, the finding is likely pseudomosaicism, caused by cell-culture artifact When abnormal cells involve multiple cultures, however, true mosaicism is more likely, and further testing of fetal blood or skin fibroblasts may be warranted. A second cell line is verified in 60 to 70 percent of these fetuses Confined Placental Mosaicism. According to studies of chorionic villus sampling (CVS), 2 percent of placentas are mosaic, even though the associated fetus is usually normal (Henderson, 1996). The mechanism underlying confined placental mosaicism may be either mitotic nondisjunction or partial correction of a meiotic error, and the mechanism appears to be chromosome-specific (Robinson, 1997). Fifteen to 20 percent of cases are associated with an adverse pregnancy outcome, such as miscarriage, fetal-growth restriction, or stillbirth Gonadal Mosaicism. Mosaicism confined to the gonads likely arises from a mitotic error in cells destined to become the gonad and results in a population of abnormal germ cells
  27. Expressivity. Individuals with the same autosomal dominant trait—even within the same family—may manifest the condition differently. Genes with such variable expressivity can produce disease manifestations from mild to very severe. Examples include neurofibromatosis, tuberous sclerosis, and adult polycystic kidney disease. Codominant Genes. If two different alleles in a gene pair are both expressed in the phenotype, they are considered to be codominant. Autosomal Recessive Inheritance A recessive trait is expressed only when both copies of the gene function in the same way. Thus, autosomal recessive diseases develop only when both gene copies are abnormal. Heterozygous carriers are usually undetectable clinically but may have biochemical test abnormalities. Many enzyme deficiency diseases display autosomal recessive inheritance, and enzyme activity in the carrier is approximately half of normal. Although this reduction usually does not cause clinical disease, it provides a phenotypic alteration that can be used for carrier screening. Other recessive conditions can be identified only by molecular genetic testing. X-Linked and Y–Linked Inheritance Most X-linked diseases are recessive. Common examples include color blindness, hemophilia A and B, and Duchenne and Becker muscular dystrophy. When a woman carries a gene causing an X-linked recessive condition, each of her sons has a 50-percent risk of being affected, and each daughter has a 50-percent chance of being a carrier. Males with an X-linked recessive gene are usually affected because they lack a second X chromosome to express the normal dominant gene. A male with an X-linked disease cannot have affected sons because they cannot receive his X chromosome. Women with an X-linked recessive gene are generally unaffected by the disease it causes. In some cases, however, the random inactivation of one X chromosome in each cell— termed lyonization—is skewed, and female carriers may have features of the condition. Fragile X Syndrome. This is the most common inherited form of mental retardation and affects approximately 1 in 3600 males and 1 in 4000 to 6000 females (American College of Obstetricians and Gynecologists, 2010). Fragile X syndrome is caused by expansion of a repeated trinucleotide DNA segment—cytosine-guanine-guanine (CGG)—at chromosome Xq27. When the CGG repeat number reaches a critical size— the full mutation—the fragile X mental retardation 1 (FMR1) gene becomes methylated. Methylation inactivates the gene, which halts expression of FMR1 protein
  28. Imprinting A gene may be inherited in a transcriptionally silent state— inherited but not expressed—depending on whether it is inherited from the mother or father. The phenotype of the individual varies according to the parent of origin. Imprinting affects gene expression by epigenetic control, that is, gene activity regulation by modification of genetic structure other than alteration of the underlying nucleotide sequence. For example, methyl group addition may alter gene expression and thereby affect the phenotype without changing the genotype. Importantly, the effect may be reversed in a subsequent generation, because a female who inherits an imprinted gene from her father will pass it on in her oocytes with a maternal—rather than paternal— imprint, and vice versa Multifactorial Inheritance Traits or diseases are considered to have multifactorial inheritance if they are determined by the combination of multiple genes and environmental factors. Polygenic traits are determined by the combined effects of more than one gene. Most congenital and acquired conditions, as well as common traits, display multifactorial inheritance. Examples include malformations such as clefts and neural-tube defects, diseases such as diabetes and heart disease, and features or traits such as head size or height. Abnormalities that display multifactorial inheritance tend to recur in families, but not according to a mendelian pattern. If a couple has had a child with a multifactorial birth defect, their empiric risk to have another affected child is 3 to 5 percent. This risk declines exponentially with successively more distant relationships