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1 of 1
1 2 3
3
2 3
1 2 3
3B.	FNIII	Ig-deletion	(Robo3	Ig-del)
3C.	FN	2	- Transmembrane
3D. FN	3	- Transmembrane
3A.	Full	Length	Robo3
3E.	Transmembrane
A wholehearted thanks to everyone in the
Jaworski Lab for their continued support and
guidance!
This project was funded by the Karen T.
Romer Undergraduate Teaching and Research
Award (UTRA).
Acknowledgments
•Many neurodevelopmental disorders,
including autism and ADHD, arise from mis-
wiring of the nervous system during
embryonic development.
•By understanding the mechanisms behind
nervous system wiring it will be possible to
elucidate the cause of mis-wiring disorders
and design treatments for these disorders.
•Exploitation of developmental wiring
pathways to promote axon growth in adults
has the potential to restore neural
connections after injury.
Motivation
The Brain, a structure of unparalleled complexity, is a vast network of interconnected neurons.
Proper development of the brain demands the formation of specific connections between
neuronal populations. To ensure proper wiring during embryonic growth, axons are guided to
their final destinations by responding to attractive and repulsive molecular cues. Neurons
detect these cues using receptors on the axon growth cone. Through integration of guidance
information, growth cones project towards their final synaptic targets. The embryonic spinal
cord is an ideal model system to study axon guidance. Spinal commissural neurons project
axons across the floor plate at the ventral midline in response to multiple cues. The growth of
these axons is partly regulated by the repulsive functions of the paracrine guidance cue, Neural
Epidermal growth factor-Like-Like 2 (NELL2). NELL2 prevents commissural axon growth into
the ventral horns through the guidance cue receptor Robo3. The Robo3 receptor is vital in
directing axons to the floor plate and is multifunctional: it directly mediates repulsion through
NELL2, indirectly potentiates attractive signaling through Netrin, and suppresses Slit repulsion.
However, it is unclear how Robo3 simultaneously mediates the response to three different cues.
To understand how Robo3 can perform these functions, the protein domains required to
mediate NELL2-facilitated repulsion must be identified. Here, we test binding between different
NELL2 and Robo3 constructs lacking specific structural motifs to determine the structures
involved in the interaction between these two proteins.
Understanding	the	NELL2–Robo3	Interaction	in	Axon	Guidance
Nischal	Acharya	and	Alexander	Jaworski,	PhD	
Department	of	Neuroscience,	Brown	University	
Introduction Future	Directions
Conclusions
Robo3: Deletion of FNIII domain #1 abolishes formation of NELL2-Robo3
complex. This suggests that FNIII domain #1 mediates NELL2-Robo3 binding.
NELL2: EGF Domains 1-3 are required for the formation of the Robo3-NELL2
complex. However, decreased signal intensity suggests additional EGF regions are
implicated in the formation of the receptor-ligand complex.
FIGURE	6:	Results	of	the	Alkaline	Phosphatase	Binding	Assay.	Upon	the	formation	of	the	NELL2-Robo3	complex,	a	purple	color	is	
produced	by	an	Alkaline	Phosphatase-catalyzed	reaction	converting	BCIP/NBT	to	an	insoluble	product,	NBT	Diformazan.	Images	of	
NELL2	structural	analysis	shown	at	higher	magnification	to	highlight	difference	in	signal	intensity.	
Results	and	Discussion
FNIII	Domain	#1	is	necessary	to	form	NELL2-Robo3	complex
Full	Length	NELL2
Mock	Robo3	Ig-del Robo3	Ig-del
Mock	NELL2	EGF	
Full	Length	NELL2
Robo3	Ig-del
Full	Length	NELL2
Robo3	2-Transmembrane
Full	Length	NELL2
Robo3	3-Transmembrane
Full	Length	NELL2
Robo3	Transmembrane
NELL2	EGF	Domains	1-3	are	required	for	NELL2-Robo3	Interaction
Full	Length	NELL2
Robo3	Ig-del
NELL2	EGF	1-3	
Robo3	Ig-del
Mock	NELL2	EGF
Robo3	Ig-del
NELL2	EGF	4-6
Robo3	Ig-del
Experimental	Design
AP1 2 3
AP4 5 6
2A.	Full	Length	NELL2
1 2 3 4 5 6
2B. NELL2	EGF	Domains	1-3
2C.	NELL2	EGF	Domains	4-6
AP
NELL2	Constructs FIGURE 2, Left: Diagram of the NELL2
DNA constructs. Alkaline Phosphatase
is fused to both truncated and Full
length (FL) constructs, allowing for
colorimetric detection of NELL2-Robo3
interaction.
Note: Previous research determines
EGF Domains 4-6 are sufficient to
create NELL2-Robo3 complex. [4]
FIGURE 3, Right: Schematic of the
Robo3 DNA constructs.
Note: Past studies demonstrate
Fibronectin type III (FNIII) domains
are sufficient for NELL2-Robo3
binding. [4]
Robo3	Constructs
Alkaline	Phosphatase	Protocol
Add	media
Collect		
NELL2	media
Grow	Cos7	
cells
Transfect	Hek293	
Cells
Transfect	Cos7	
Cells
FIGURE	5:	Cos7	cells	expressing	different	
Robo3	constructs	are	incubated	with	NELL2	
media.	If	receptor-ligand	complex	forms,	
Alkaline	Phosphatase	will	produce	a	visible	
purple	product.	
Detect	AP	Activity
FIGURE	1A:	Integration	of	attractive	
and	repulsive	cues	causing	
directional	axon	growth.	[1]
FIGURE 1B: NELL2 expression
facilitating commissural axon growth
towards ventral floor plate during
development. [2]
FIGURE 1C: Repulsive guidance cue
mediated growth cone turning. [3]
Attractive	Cue	
NELL2,	Repulsive	Cue	
1A 1B
Floor	plate
Commissural	
interneuron
Axon
Growth	Cone
Repulsive	Cue	
Receptor
1C
References
[1]:	Image	adapted	from	Mann	F.	et	al.	Cancer	Cell,	2013
[2]:	Image	adapted	from	Jaworski et	al.	Science,	2015
[3]:	Image	adapted	from	Kalil K.	et	al.	Frontiers	of	Neuroanatomy,	2011
[4]:	Jaworski et	al.	Science,	2015
[5]:	Image	acquired	from	Alila Medical	Images
DNA	
Constructs	
(Fig.	2,3)
Synthesis	of	
Proteins
Recombinant	
DNA
DNA	
Transfection
Insertion	of	DNA	
into	bacterial	
plasmid
Sticky	
Ends
Plasmid
Recombination
Human	CellBacterial	
Chromosome
Bacterial	Cell
Bacterial	Transformation:	Creating	DNA	Constructs
FIGURE 4: Synthesis of expression constructs (Fig. 2,3) through
molecular cloning and introduction into mammalian cells.
[5]
• Determine	if	FNIII	domain	#1	is	
sufficient	to	form	the	NELL2-Robo3	
complex.
• Design	different	Robo3	DNA	
constructs	that	contain	the	FNIII	
domain	#1;	test	binding	to	NELL2.
• Elucidate	whether	EGF	Domains	4,5,6	
potentiate	NELL2-Robo3	binding
• Engineer	NELL2	DNA	constructs	
that	contain	EGF	domains	1-3	along	
with	combinations	of	EGF	domains	
4,	5,	6;	test	interaction	with	Robo3.
• Determine	the	amino	acids	necessary	
to	mediate	the	NELL2-Robo3	
interaction	through	point	mutations	
of	DNA.
• Using	protein	crystallography,	
illuminate	the	three-dimensional	
structure	of	the	ligand-receptor	
complex,	NELL2-Robo3.

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Understanding the NELL2–Robo3 Interaction in Axon Guidance

  • 1. 1 2 3 3 2 3 1 2 3 3B. FNIII Ig-deletion (Robo3 Ig-del) 3C. FN 2 - Transmembrane 3D. FN 3 - Transmembrane 3A. Full Length Robo3 3E. Transmembrane A wholehearted thanks to everyone in the Jaworski Lab for their continued support and guidance! This project was funded by the Karen T. Romer Undergraduate Teaching and Research Award (UTRA). Acknowledgments •Many neurodevelopmental disorders, including autism and ADHD, arise from mis- wiring of the nervous system during embryonic development. •By understanding the mechanisms behind nervous system wiring it will be possible to elucidate the cause of mis-wiring disorders and design treatments for these disorders. •Exploitation of developmental wiring pathways to promote axon growth in adults has the potential to restore neural connections after injury. Motivation The Brain, a structure of unparalleled complexity, is a vast network of interconnected neurons. Proper development of the brain demands the formation of specific connections between neuronal populations. To ensure proper wiring during embryonic growth, axons are guided to their final destinations by responding to attractive and repulsive molecular cues. Neurons detect these cues using receptors on the axon growth cone. Through integration of guidance information, growth cones project towards their final synaptic targets. The embryonic spinal cord is an ideal model system to study axon guidance. Spinal commissural neurons project axons across the floor plate at the ventral midline in response to multiple cues. The growth of these axons is partly regulated by the repulsive functions of the paracrine guidance cue, Neural Epidermal growth factor-Like-Like 2 (NELL2). NELL2 prevents commissural axon growth into the ventral horns through the guidance cue receptor Robo3. The Robo3 receptor is vital in directing axons to the floor plate and is multifunctional: it directly mediates repulsion through NELL2, indirectly potentiates attractive signaling through Netrin, and suppresses Slit repulsion. However, it is unclear how Robo3 simultaneously mediates the response to three different cues. To understand how Robo3 can perform these functions, the protein domains required to mediate NELL2-facilitated repulsion must be identified. Here, we test binding between different NELL2 and Robo3 constructs lacking specific structural motifs to determine the structures involved in the interaction between these two proteins. Understanding the NELL2–Robo3 Interaction in Axon Guidance Nischal Acharya and Alexander Jaworski, PhD Department of Neuroscience, Brown University Introduction Future Directions Conclusions Robo3: Deletion of FNIII domain #1 abolishes formation of NELL2-Robo3 complex. This suggests that FNIII domain #1 mediates NELL2-Robo3 binding. NELL2: EGF Domains 1-3 are required for the formation of the Robo3-NELL2 complex. However, decreased signal intensity suggests additional EGF regions are implicated in the formation of the receptor-ligand complex. FIGURE 6: Results of the Alkaline Phosphatase Binding Assay. Upon the formation of the NELL2-Robo3 complex, a purple color is produced by an Alkaline Phosphatase-catalyzed reaction converting BCIP/NBT to an insoluble product, NBT Diformazan. Images of NELL2 structural analysis shown at higher magnification to highlight difference in signal intensity. Results and Discussion FNIII Domain #1 is necessary to form NELL2-Robo3 complex Full Length NELL2 Mock Robo3 Ig-del Robo3 Ig-del Mock NELL2 EGF Full Length NELL2 Robo3 Ig-del Full Length NELL2 Robo3 2-Transmembrane Full Length NELL2 Robo3 3-Transmembrane Full Length NELL2 Robo3 Transmembrane NELL2 EGF Domains 1-3 are required for NELL2-Robo3 Interaction Full Length NELL2 Robo3 Ig-del NELL2 EGF 1-3 Robo3 Ig-del Mock NELL2 EGF Robo3 Ig-del NELL2 EGF 4-6 Robo3 Ig-del Experimental Design AP1 2 3 AP4 5 6 2A. Full Length NELL2 1 2 3 4 5 6 2B. NELL2 EGF Domains 1-3 2C. NELL2 EGF Domains 4-6 AP NELL2 Constructs FIGURE 2, Left: Diagram of the NELL2 DNA constructs. Alkaline Phosphatase is fused to both truncated and Full length (FL) constructs, allowing for colorimetric detection of NELL2-Robo3 interaction. Note: Previous research determines EGF Domains 4-6 are sufficient to create NELL2-Robo3 complex. [4] FIGURE 3, Right: Schematic of the Robo3 DNA constructs. Note: Past studies demonstrate Fibronectin type III (FNIII) domains are sufficient for NELL2-Robo3 binding. [4] Robo3 Constructs Alkaline Phosphatase Protocol Add media Collect NELL2 media Grow Cos7 cells Transfect Hek293 Cells Transfect Cos7 Cells FIGURE 5: Cos7 cells expressing different Robo3 constructs are incubated with NELL2 media. If receptor-ligand complex forms, Alkaline Phosphatase will produce a visible purple product. Detect AP Activity FIGURE 1A: Integration of attractive and repulsive cues causing directional axon growth. [1] FIGURE 1B: NELL2 expression facilitating commissural axon growth towards ventral floor plate during development. [2] FIGURE 1C: Repulsive guidance cue mediated growth cone turning. [3] Attractive Cue NELL2, Repulsive Cue 1A 1B Floor plate Commissural interneuron Axon Growth Cone Repulsive Cue Receptor 1C References [1]: Image adapted from Mann F. et al. Cancer Cell, 2013 [2]: Image adapted from Jaworski et al. Science, 2015 [3]: Image adapted from Kalil K. et al. Frontiers of Neuroanatomy, 2011 [4]: Jaworski et al. Science, 2015 [5]: Image acquired from Alila Medical Images DNA Constructs (Fig. 2,3) Synthesis of Proteins Recombinant DNA DNA Transfection Insertion of DNA into bacterial plasmid Sticky Ends Plasmid Recombination Human CellBacterial Chromosome Bacterial Cell Bacterial Transformation: Creating DNA Constructs FIGURE 4: Synthesis of expression constructs (Fig. 2,3) through molecular cloning and introduction into mammalian cells. [5] • Determine if FNIII domain #1 is sufficient to form the NELL2-Robo3 complex. • Design different Robo3 DNA constructs that contain the FNIII domain #1; test binding to NELL2. • Elucidate whether EGF Domains 4,5,6 potentiate NELL2-Robo3 binding • Engineer NELL2 DNA constructs that contain EGF domains 1-3 along with combinations of EGF domains 4, 5, 6; test interaction with Robo3. • Determine the amino acids necessary to mediate the NELL2-Robo3 interaction through point mutations of DNA. • Using protein crystallography, illuminate the three-dimensional structure of the ligand-receptor complex, NELL2-Robo3.