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IAALD - XIII World Congress  Contribution of standards to developing networks, crops ontology and global portals to provide access to plant genetic resources Adriana Alercia, Michael Mackay Bioversity International, HQ Montpellier, 29 April 2010
Crop Standards  ,[object Object],[object Object],[object Object],[object Object]
BIOVERSITY DESCRIPTORS AND DERIVED  STANDARDS  ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Brief History of Bioversity Standards ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Development Process ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Crop Standards Passport Management  Environment and site  Characterization Evaluation
FAO/IPGRI (MCPD) Passport Standard ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
FAO/IPGRI (MCPD) Passport Standard EURISCO FAO-WIEWS SINGER GERMINATE ECPGR CCDB GENESYS CROP NETWORKS
Descriptors for Genetic Marker Technologies  Descriptors targeted to researchers using genetic marker technologies to generate and exchange genetic marker data that are standardized and replicable    Minimum set of descriptors needed to describe a marker technology used with a particular plant species
Standards for Farmers’ Knowledge ,[object Object],[object Object],[object Object]
Traditional Knowledge: Link between Standards and Farmers’ Knowledge sharing INTO DATABASES AND PORTALS FARMERS’ KNOWLEDGE SCIENTISTS’ KNOWLEDGE STANDARDIZED DOCUMENTATION WITH DESCRIPTOR LISTS TO SCIENTIFIC COMMUNITY TO FARMING COMMUNITY? A Generic Database for Integrating Genotypic and Phenotypic Information for PGR
Some expected benefits from Farmers Standard ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Contribution of Standards: Global portals and Crop networks MCPD GCP ontologies                                                         
Contributing to Networks: SINGER, A network of Genebanks Landraces Wild species Advanced   cultivars 27 % 59 % 14 % ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
How information is shared? Passport Characterization Evaluation Multi-crop Descriptors MCPD
Contributing to Networks:  EURISCO: A network of Genebanks ,[object Object],[object Object]
How information is  shared? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],MCPD nat. inven-tory nat. inven-tory nat. inven-tory nat. inven-tory nat. inven-tory nat. inven-tory nat. inven-tory nat. inven-tory gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank gene- bank
Contributing to DBs:   The  Musa  Germplasm information System (MGIS)
Contributing to DBs: Coconut Genetic Resources Database CGRD Courtesy of Chantal Hamelin,CIRAD
Coverage of Descriptors ,[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],Impact Assessments on Bioversity Descriptors
Importance of different types of descriptors (CCER, 2007)   Essential or  Somewhat    Not used at all   important     important BIOVERSITY  86%      10%    4%  UPOV  52%      18%   30%  USDA-GRIN 33%      22%    44%  COMECON  8%      15%    77%
Types of organizations using descriptors and derived standards (CCER, 2007)
Some benefits (CCER, 2007) ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
CONCLUSIONS ,[object Object],[object Object],[object Object]
THANK YOU!

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Contribution of standards for developing networks, crop ontologies and a global portal to provide access to plant genetic resources

  • 1. IAALD - XIII World Congress Contribution of standards to developing networks, crops ontology and global portals to provide access to plant genetic resources Adriana Alercia, Michael Mackay Bioversity International, HQ Montpellier, 29 April 2010
  • 2.
  • 3.
  • 4.
  • 5.
  • 6. Crop Standards Passport Management Environment and site Characterization Evaluation
  • 7.
  • 8. FAO/IPGRI (MCPD) Passport Standard EURISCO FAO-WIEWS SINGER GERMINATE ECPGR CCDB GENESYS CROP NETWORKS
  • 9. Descriptors for Genetic Marker Technologies  Descriptors targeted to researchers using genetic marker technologies to generate and exchange genetic marker data that are standardized and replicable  Minimum set of descriptors needed to describe a marker technology used with a particular plant species
  • 10.
  • 11. Traditional Knowledge: Link between Standards and Farmers’ Knowledge sharing INTO DATABASES AND PORTALS FARMERS’ KNOWLEDGE SCIENTISTS’ KNOWLEDGE STANDARDIZED DOCUMENTATION WITH DESCRIPTOR LISTS TO SCIENTIFIC COMMUNITY TO FARMING COMMUNITY? A Generic Database for Integrating Genotypic and Phenotypic Information for PGR
  • 12.
  • 13. Contribution of Standards: Global portals and Crop networks MCPD GCP ontologies                                                         
  • 14.
  • 15. How information is shared? Passport Characterization Evaluation Multi-crop Descriptors MCPD
  • 16.
  • 17.
  • 18. Contributing to DBs: The Musa Germplasm information System (MGIS)
  • 19. Contributing to DBs: Coconut Genetic Resources Database CGRD Courtesy of Chantal Hamelin,CIRAD
  • 20.
  • 21.
  • 22. Importance of different types of descriptors (CCER, 2007) Essential or Somewhat Not used at all important important BIOVERSITY 86% 10% 4% UPOV 52% 18% 30% USDA-GRIN 33% 22% 44% COMECON 8% 15% 77%
  • 23. Types of organizations using descriptors and derived standards (CCER, 2007)
  • 24.
  • 25.

Editor's Notes

  1. c.20