"From the Chromosome...Everything". My Inaugural Lecture at the Blizard Institute, Barts & The London School of Medicine & Dentistry, Queen Mary University of London. 10th May 2010.
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Denise Sheer Inaugural Lecture
1. De Generatione Animalium
On the Generation of Animals
William Harvey, 1651
Ex ovo omnia
From the egg, everything
1578-1657
Denise Sheer ~ Inaugural Lecture 10th May 2010
3. Walther Flemming
1843-1905
Antonie van Leeuwenhoek
1632-1723
Polytene chromosomes
in Chironomus
Dividing cells
Chick red blood cells
Denise Sheer ~ Inaugural Lecture 10th May 2010
4. Cells behave as they do because of their genes
Cell nucleus
46 chromosomes
GenesDNA
Denise Sheer ~ Inaugural Lecture 10th May 2010
5. Where do genes map onto chromosomes?
What is the architecture of the chromosome?
Which genetic abnormalities are involved in cancer?
Denise Sheer ~ Inaugural Lecture 10th May 2010
6. A path travelled well….
Denise Sheer ~ Inaugural Lecture 10th May 2010
7. Dr Jenni Tsafrir
Genetics of eye colour
What was known then about chromosomes?
1965 - Barbara McClintock, Cornell University-Aspects of Gene Control in Higher Organisms
“mechanisms related to.. .the chromosomes…and the highly organized nuclei”.
Down Syndrome
Denise Sheer ~ Inaugural Lecture 10th May 2010
8. 1969-1973
University of the Witwatersrand
Johannesburg
B.Sc - Zoology & Embryology
BSc (Hons) - Zoology
Prof Barry FabianProf Boris Balinsky
Professor Barry Fabian
nature Lifetime Mentoring Award 2007
Denise Sheer ~ Inaugural Lecture 10th May 2010
9. Hamburger & Hamilton 1951
Balinsky 1925
Amabis & Cabral 1970
Denise Sheer ~ Inaugural Lecture 10th May 2010
10. 1974-1975
South African Institute
of Medical Research
Anti-Snake Venom
Primate Research
Prof Trefor Jenkins
Diagnostic genetics
Genetic counselling
Chromosome banding
“Effects of dagga on primate chromosomes”
Down Syndrome
Denise Sheer ~ Inaugural Lecture 10th May 2010
11. Supervisor: Dr Martin Bobrow
1976-1980
University of Oxford
D.Phil.
Sir Walter Bodmer
Reproduced with kind permission of Juliet Wood
X X
x
X
Xx
v
vv vv v
v vv v
v v v
vv v
v vv v
v
vv
X
vv v
v vv v
v vv v
vv v
v vv v
v vv
x
Human
Cells
Mouse
Cells
Gene 1 Gene 2 Gene 3
Human-Mouse Hybrid Cells
Mapping genes onto chromosomes
Denise Sheer ~ Inaugural Lecture 10th May 2010
12. Imperial Cancer Research Fund/
Cancer Research UK
1980-1982 Post-Doctoral Research Fellow with Dr. Ellen Solomon
1982-2006 Head: Human Cytogenetics Laboratory
Mapping genes onto chromosomes
Denise Sheer ~ Inaugural Lecture 10th May 2010
14. Mapping the APC gene on chromosome 5
Adenomatous Polyposis Coli APC gene at 5q21
Bodmer et al 1987
Denise Sheer ~ Inaugural Lecture 10th May 2010
15. Genetic abnormalities in cancer
At the cellular level, cancer is a genetic disease
Denise Sheer ~ Inaugural Lecture 10th May 2010
16. Acute Lymphoblastic Leukaemia
Acute Myelomonocytic Leukaemia
Acute Promyelocytic Leukaemia
Breast Carcinoma
Chronic Myeloid Leukaemia
Colorectal Adenoma
Congenital Fibrosarcoma
Ewing’s Sarcoma
Glioblastoma
Krukenberg Tumour
Neuroblastoma
Ovarian Carcinoma
Pancreatic Carcinoma
Primitive Neuro-ectodermal Tumour
Genetic abnormalities in cancer
Ovarian Carcinoma
Glioblastoma
Neuroblastoma
Breast Carcinoma
Denise Sheer ~ Inaugural Lecture 10th May 2010
17. 15;17 identified in all cases of APL
Mapping the breakpoints
15;17 chromosome translocation in Acute Promyelocytic Leukaemia
X X
x
X
Xx
v
Vv vv v
v vv v
v v v
v
Human
Cells
Mouse
Cells
vv v
v vv v
vv V
Gene 1
vv v
v vv v
v vv
x
Gene 2
Sheer et al 1983
Sheer et al 1985
Denise Sheer ~ Inaugural Lecture 10th May 2010
18. What is the architecture of the chromosome?
“The great tragedy of science -
the slaying of a beautiful hypothesis by an ugly fact”
Thomas Henry Huxley (1870)
Thomas & Marion Cremer
Comings 1968 Cremer et al 1976
Chinese Hamster cells after
focal laser UV irradiation
Chromosome Territories
Inter-Chromosome Domain
Cremer et al 1993
Denise Sheer ~ Inaugural Lecture 10th May 2010
19. Chromosomes occupy discrete territories
Cremer & Cremer 2006Bolzer et al 2005
Denise Sheer ~ Inaugural Lecture 10th May 2010
21. MHC
Chr
6
Inac&ve
Ac&ve
Chromosome architecture is related to gene activity
Volpi et al 2000
Inac&ve
Ac&ve
* *
*
*
*
*
Ac&ve
Denise Sheer ~ Inaugural Lecture 10th May 2010
22. 2006
Centre for Neuroscience & Trauma
Blizard Institute of Cell & Molecular Science
Barts & the London School of Medicine & Dentistry
Queen Mary University of London
What is the architecture of the chromosome?
What are the molecular determinants?
Which genetic abnormalities are involved in cancer?
How do children’s brain tumours arise?
Denise Sheer ~ Inaugural Lecture 10th May 2010
23. Chromosome architecture is dependent on signalling pathways
Inac&ve
Ac&ve
Interferon Gamma
JAK-STAT SIGNALLING
Christova et al 2007
Denise Sheer ~ Inaugural Lecture 10th May 2010
24. Chromosome architecture is related to gene activity
Inac&ve
Ac&ve
Anchored sites
Ottaviani et al 2008a,b
Denise Sheer ~ Inaugural Lecture 10th May 2010
25. Genetic abnormalities in paediatric low grade astrocytoma
SEERDenise Sheer ~ Inaugural Lecture 10th May 2010
26. Tiny duplication on chromosome 7 in pilocytic astrocytoma
Denise Sheer ~ Inaugural Lecture 10th May 2010
27. Forshew et al 2009; Tatevossian et al 2010; Lawson et al 2010
Tiny duplication on chromosome 7 in pilocytic astrocytoma
Denise Sheer ~ Inaugural Lecture 10th May 2010
28. KIAA1549 BRAF
Genes duplicated on chromosome 7
Forshew et al 2009; Tatevossian et al 2010; Lawson et al 2010Denise Sheer ~ Inaugural Lecture 10th May 2010
29. KIAA1549 BRAF
KIAA1549 BRAFKIAA1549- BRAF
fusion
Forshew et al 2009; Tatevossian et al 2010; Lawson et al 2010
Genes duplicated on chromosome 7
Denise Sheer ~ Inaugural Lecture 10th May 2010
30. The MAP kinase signalling pathway
BRAF
MEK1/2
ERK1/2
RAS
NF1
Signals from outside the cell
Forshew et al 2009; Tatevossian et al 2010; Lawson et al 2010
Regulated Cell Division
Denise Sheer ~ Inaugural Lecture 10th May 2010
32. BRAF fusion causes cells to keep dividing
MEK1/2
ERK1/2
RAS
P
P
NF1
Signals from outside the cell
BRAFKIAA1549
Increased Cell Division
Denise Sheer ~ Inaugural Lecture 10th May 2010
33. MEK1/2
ERK1/2
RAS
P
P
NF1
Signals from outside the cell
BRAFKIAA1549
New opportunities for treatment for pilocytic astrocytoma
Inhibitor
Increased Cell Division
Denise Sheer ~ Inaugural Lecture 10th May 2010
34. BRAF fusions: A microhomology mediated mechanism?
microhomology
insertion
microhomology
microhomology
microhomology
microhomology
insertion
Lawson, Hindley et alDenise Sheer ~ Inaugural Lecture 10th May 2010
35. BRAF fusions: A microhomology mediated mechanism?
Denise Sheer ~ Inaugural Lecture 10th May 2010
36. Where to now?
Where do genes map onto chromosomes?
What is the architecture of the chromosome?
Which genetic abnormalities are involved in cancer?
Cremer et al 2006
Denise Sheer ~ Inaugural Lecture 10th May 2010
37. Centre for Neuroscience and Trauma
Prof John Priestley ~ Prof Gavin Giovannoni
Surinder Pal ~ Carol Brown
Sir Nick Wright
Prof Tom MacDonald
Prof Mike Curtis
Jo Kirner ~ Kerry Newbury
Josie Dance
BLIZARD INSTITUTE OF CELL AND MOLECULAR SCIENCE
Denise Sheer ~ Inaugural Lecture 10th May 2010
38. Johan Aarum
Pavel Bezecny
Rossi Christova
Tim Forshew
Guy Hindley
Gabriel Jamie
Tania Jones
Andrew Lawson
Elliott Lever
William Ogunkolade
Diego Ottaviani
Chris Pieri
Jarek Szary
Ruth Tatevossian
Denise Sheer ~ Inaugural Lecture 10th May 2010
39. Jane Babbage
Srinjan Basu
Andi Bolzer
Guiseppe Calabrese
Edith Chevret
Rossen Donev
Ceri Edwards
Luda Federova
Rachel Gillingham
Pat Gorman
Vikki Groves
Peter Johonnett
Fiona Kiely
Xin Mao
Chiara Mazzanti
Paul Mulholland
Rosella Muresu
Alistair Newall
Rodger Palmer
Ketan Patel
Chrys Poulikas
Sue Rider
Rebecca Roylance
Gabi Senger
Carol Shiels
Janet Shipley
Petros Takousis
Badmavady Segarane
Clare Taylor
Radost Vatcheva
Emanuela Volpi
Jayson Wang
Sarah Williams
Jill Williamson
Pei Jun Wu
Stephan Beck
Walter Bodmer
Marion Cremer
Thomas Cremer
Thomas Down
David Ellison
Thomas Jacques
Chris Jones
Gavin Kelly
David Kelsell
Steve Krawetz
Mike Levin
Andrew Lister
Antony Michalski
Richard Mitter
Paul Mulholland
Dean Nizetic
Andrew Pearson
Jon Pritchard
Jiannis Ragoussis
Peter Sasieni
Janet Shipley
Andrew Silver
Jeremy Squire
John Trowsdale
Frank Uhlmann
Bryan Young
Denise Sheer ~ Inaugural Lecture 10th May 2010