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CiteXtract: extracting references from the life science literature

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Nikolay12

Presentation given in September 2006 at the Sequence database group at the European Bioinformatics Institute in Cambridge, UK.

EducationTechnology
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CiteXtract: extracting references from the life science literature Nikolay Nikolov Stoehr/Zhu Group European Bioinformatics Institute September, 2006
Contents: ,[object Object],[object Object],[object Object]
About citeXtract ,[object Object],[object Object],[object Object],[object Object]
About citeXtract: Motivation ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
citeXtract: Citation context ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
citeXtract: Challenges ,[object Object],[object Object],[object Object],[object Object]
Getting HTML from PDF ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
HTML irregularities: Blanks
HTML irregularities: Overlaps
Reason for the blanks/overlaps ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Solution for the blanks/overlaps ,[object Object],[object Object],[object Object]
Journal Layout Variation ,[object Object],[object Object],[object Object],[object Object]
Journal Layout Variation ,[object Object],[object Object],[object Object],[object Object]
citeXtract challenges: Journal Layout Variation ,[object Object],[object Object]
citeXtract challenges: Citation format irregularities Most popular: Sometimes the title is left out: Order of elements and how they are separated can differ, too:
citeXtract: current state ,[object Object],[object Object],[object Object]
citeXtract: what comes next ,[object Object],[object Object],[object Object]
citeXtract: Acknowledgements ,[object Object]
References ,[object Object],[object Object]

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CiteXtract: extracting references from the life science literature