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玩轉玩轉 LHCLHC 公開數據公開數據
Play around with the LHC Open DataPlay around with the LHC Open Data
Yuan CHAO ( 趙元 )
(National Taiwan University, Taipei, Taiwan)
COSCUP 2018
2018/08/11-12
我是誰?
Yuan CHAO (John)
YChao
...
研究員
高能物理
使用 OSS 做研究 ...
質子加速的軌跡
The path of the protons
– CERN Overview
animation
http://cds.cern.ch/record/2020780
http://www.youtube.com/watch?v=pQhbhpU9Wrg
全球 LHC 計算網格
Worldwide LHC
Computing Grid (WLCG)
如何分析處理數據?
https://cdsweb.cern.ch/record/1541893
https://www.youtube.com/watch?v=jDC3-QSiLB4
歐洲粒子物理研究機構
CERN
的地理位置
瑞士
日內瓦近郊
跨越瑞法邊境
LHC 周長 27 KM
位於地下
50~150 公尺
質子經逐級加速
接近光速高能對撞
四個對撞點進行實驗
通用型
Atlas, CMS
特定目的
Alice, LHCb
我參加的實驗http://cms.web.cern.ch/org/cms-public
http://zh.wikipedia.org/wiki/%E7%B7%
對撞生成的粒子
會穿過偵測器
留下軌跡或能量
的電子訊號
質子團每秒通過
四千萬次 (40MHz)
平均每次有 15 個對撞
真正有意義的對撞約
只有百萬分之一
高速硬體邏輯電路
先篩選出萬分之一事例
特殊極高速網路傳送至
「線上」叢集電腦
軟體粗篩出
百分之一事例
可隨時最佳化
各實驗篩選出
的資料
集中傳送至
零級資料中心
儲存
實驗期間
7 x 24 不間斷
第零級資料中心位於 CERN 及布達佩斯
將實驗事例重建 磁帶長期保存
資料分散保存在 13 個一級資料中心
二級資料中心提供實驗學家模擬與分析數據
( 前 ) 亞洲唯一
一級資料中心
中研院網格中心
研究員
高能物理
使用 OSS 做研究 ...
Member of CMS Experiment
尋找希格斯粒子
Atlas Higgs ML
Challenge
https://www.kaggle.com/c/higgs-boson
$13,000 & 876 teams
淺嚐味物理
Search for
charged lepton
flavour violation
https://www.kaggle.com/c/flavours-of-physics
Search for new physics on lepton-flavour violation
$15,000 & 673 teams
機器學習粒子追跡
TrackML Challenge
https://www.kaggle.com/c/trackml-particle
-identification
To develop new machine-learning solutions for the
next generation of particle detectors
$25,000 & Nvidia v100 GPU and more...
e 電子?
τ 濤子? ?
μ 渺子?? ?
味物理?
電荷宇稱不守恆?
–- 請給我五分鐘
26
標準模型標準模型 Standard ModelStandard Model
~10-18
m宇宙的尺度 http://htwins.net/scale2/~10-1
m
膠子 光子 W/Z 子 重力子
強作用力 電磁力 弱作用力 重力
夸
克
輕
子
奈米 =10-9
m
27
大霹靂大霹靂 The Origin of the UniverseThe Origin of the Universe
28
四大問題四大問題 The QuestionsThe Questions
LHC was built for the following
purposes:
質量的來源
To find the origin of mass...
the Higgs boson.
暗物質與暗能量
Looking for the unification..
Super-symmetry as well as
other candidates of Dark Mater
& Dark energy
反物質的消失
Investigate the mystery of
anti-matter disappearance
宇宙初期狀態
Physics at the early stage of the
universe: Heavy Ion Collisions
and Quark-Gluon Plasma
Courtesy of Center for European Nuclear Research (CERN), Geneva,
Switzerland.
29
Symmetry & Flavor PhysicsSymmetry & Flavor Physics
People think the universe is symmetric? E = mc2
Parity violation introduced by T.D. Lee ( 李政道 ) and C.N.
Yang ( 楊振寧 ) in 1956.
–- 宇稱不守恆
Parity violation seen in a β decay by C.S. Wu ( 吳健雄 ) in
1957. Nobel prize for Lee & Yang.
CP violation discovered in Kaon system in 1964.
M. Kobayashi and T. Maskawa introduced CP violation in
the Standard Model in 1973.
–- 電荷・宇稱不守恆
Sanda and Carter pointed out the possibility of CP
violation in the B meson system in 1980.
Prof. Wu's experiment in
1956. Prof. Li and Yang
got Nobel Prize in 1957.
http://de.wikipedia.org/wiki/Wu-Experiment
31
Symmetry & Flavor PhysicsSymmetry & Flavor Physics
KTeV experiment at FNAL established the direct CP
violation in Kaon system and confirmed by NA48 at
CERN in 1999.
Belle and BaBar observed indirect CP violation B meson
system in 2002.
Belle observed the direct CP violation in B → ππ but not
confirmed by BaBar in 2004
Belle and BaBar present the evidence of direct CP
violation in B → Kππ in 2004.
M. Kobayashi ( 小林誠 ) and T. Maskawa ( 益川敏英 )
share the Nobel Prize in 2008
with Y. Nambu ( 南部陽一郎 ).
CP violation can't fully explain
the Baryon asymmetry problem.
→ People cont. searching for NP
Machine
Learning is
nothing new
in HEP
People in Tevatron, B-factories,
LEP and LHC experiments
more or less use MVA in their
studies!
(LL, LD → BDT, NN, .. → DL?)
Supervised learning → MC vs. Data
Era of analog
~1980
↓
Digital
Processing
General Physics
34
Yuan CHAO
正子正子
雲霧室 / 泡箱照片可以看到帶電粒子通過的軌跡
正子是電子的反粒子 by Carl D. Anderson 1932
磁場
⊗
鉛板
曲率半徑小
動量小 23MeV
曲率半徑大
動量大 63MeV
物理到此為止 ...
https://home.cern/about/updates/2017/12/cms-releases-more-one-petabyte-open-data
37
建構環境建構環境 Environment SetupEnvironment Setup
Following the instructions here:
http://opendata.cern.ch/docs/cms-getting-started-2011
Download and install VirtualBox
Obtain virtualbox for your host machine (ver. >= 5.2.2)
https://www.virtualbox.org/wiki/Downloads
Get the CERN VM image
D/L CMS-specific CernVM image as OVA file
http://opendata.cern.ch/record/252
Use of CMS-Open-Data-1.3.0.ova is recommended
Disk usage is copy-on-write (allocated only when needed)
Start the VM image
Remember to enable VT-x in BIOS and turn-off 2nd
NIC
Environment configuration
Use the following commands:
cmsrel CMSSW_5_3_32
cd CMSSW_5_3_32/src/
cmsenv
38
建構環境建構環境 Env. Setup (cont.)Env. Setup (cont.)
Boot up the VM image
39
ROOTROOT 環境環境
Try to load a ROOT sample
$ root
root://eospublic.cern.ch//eos/opendata/cms/Run2011A/Electron
Had/AOD/12Oct2013-v1/20001/001F9231-F141-E311-8F76-
003048F00942.root
40
ROOTROOT 環境環境 (cont.)(cont.)
Type in ROOT commands:
root [1] TBrowser t
Double-click on electron obj.
See the electron
pT distribution
41
ROOTROOT 環境環境 (cont.)(cont.)
Type in ROOT commands:
root [1] TBrowser t
Double-click on electron obj.
See the electron
pT distribution
42
ROOT Data StructureROOT Data Structure
Know your DATA!
Event based data
Hierarchical structure
ROOT
→ Tree
→ Branch
→ Leaf
https://root.cern.ch/doc/v608/classTTree.html
43
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Details are available at:
http://opendata.cern.ch/record/5001
Get the source code from GitHub
Directly accessing the data with python
Using a simplified sample (PAT)
Check out the code here:
$ git clone git://github.com/cms-opendata-
analyses/OutreachExercise2011.git
$ scram build
$ cmsenv
$ cd OutreachExercise2011/DecaysToLeptons/run/
$ ipython run.py
General Physics
44
Yuan CHAO
The Z bosonThe Z boson
Discovered in UA1 & UA2 at CERN:
Charge = 0. Spin J = 1 (boson)
Elementary particle
Mass: 91.1876 ± 0.0021 GeV/c2
Full width Γ = 2.4952 ± 0.0023 GeV
Decay modes
Z → l+
l-
: 3.3658 ± 0.0023 x 10-2
x 3
Z → Invisible: 20.00 ± 0.06 x 10-2
Z → Hadrons: 69.91 ± 0.06 x 10-2
We'll do exercise to find Z → e+
e-
or μ+
μ-
45
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Result of 100 events, two-lepton analyzer
46
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Result of 10000 events, two-lepton analyzer
47
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Result of 100000 events, two-lepton analyzer
48
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Result of 1000000 events, four-lepton analyzer
49
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Result of 1000000 events, four-lepton analyzer
Higgs boson
candidates!!!
General Physics
50
Yuan CHAO
基本粒子基本粒子
隨著加速器的發展,更多的粒子被發現
詳細的資料可見 PDG 手冊或網頁 :
http://pdglive.lbl.gov/
特別的屬性 cτ – 衰變前飛行距離
粒子偵測器中可見的「長壽命」粒子:
e±
, μ±
, γ, π±
,K±
, KL
, n, p±
不同的粒子有不同的「靜止質量」
Resonance / rest mass is like the finger print of particles
類比於光譜分析的概念
General Physics
51
Yuan CHAO
共振態共振態
衰變粒子重建
短壽命粒子的生命期小於 10-23
sec
當接近光速運動時 → 衰變軌跡小於 10-15
m
實驗觀測碰撞截面 cross-section σ 與不變質量 invariant
mass M, 的分佈,共振態以鐘形分佈出現 bell-shaped
E = m c2
自然單位 : c = ħ = 1
52
實際分析數據實際分析數據 Analyzing the DataAnalyzing the Data
Calculating the invariant mass
https://github.com/cms-opendata-education/cms-jupyter-materia
ls-english/blob/master/Exercises-with-open-data/Calculate-inv
ariant-mass.ipynb
Searching for possible resonances from the invariant
mass distribution
Higgs boson
candidates!!!
Z boson
candidates!!!
53
Related URLsRelated URLs
LHC computing grid (LCG) and CERN overview video:
https://cds.cern.ch/record/2020780
"Higgs ML" Kaggle Challenge
https://www.kaggle.com/c/higgs-boson
“Flavour of physics” Kaggle Challenge
https://www.kaggle.com/c/flavours-of-physics
宇宙的尺度 http://htwins.net/scale2/
CMS Open Data
http://opendata.cern.ch/docs/observing-higgs-over-on
e-petabyte-new-cms-open-data
CERN VM image: http://opendata.cern.ch/record/252
CMS open data tutorial jupyter NB:
https://github.com/cms-opendata-education
以上
Thank YOU!
謝謝
Remercie de Votre
Attention
55
Installing Jupyter & SciPyInstalling Jupyter & SciPy
Setup a virtual environment
(you need python installed before hands)
Using pip:
$ pip3 install virtualenv
You can also use easy_install or apt-get instead
Open a terminal
Type in the following commands:
$ virtualenv -p python3 .scienv
$ source .scienv/bin/activate ← activate the environment!
$ pip3 install --upgrade pip
$ pip3 install jupyter
$ pip3 install scipy pandas sklearn ← you get all packages
Then start the jupyter notebook server:
$ jupyter notebook ← a web page will be loaded automatically
Here we go!
56
Installing ROOTInstalling ROOT
Get the ROOT binary for Ubuntu / Scientific Linux
Source and pre-build binaries are here:
https://root.cern.ch/content/release-61402
Find a desired package.
Install from package managers
Ubuntu: type in the following commands:
$ sudo apt-get install root-system ← for all or root-system-bin
On Scientific Linux and other variants (RH, CentOS...)
$ sudo yum install root
On OSX – available through home brew Formulae
$ brew install root
Test your installation with ROOT GUI:
$ root -l ← " -l" means no splash window
root [0] TBrowser t ← make sure no error messages

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