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Exp 6
Enzyme Kinetics
of Acid Phosphatase

Miss Huichun
2013/10/25 at TCU
Label 20 test tubes. Add 50 µl
pNPP of 3, 6, 12, 30, 60 mM to each
tube.
3

6

12

30

60

50 µl
200 µl

Set I,
No inhibitor

0
15

Cit
bu r at e
ff e
r

Substrate
[pNPP]

Add 200 µl Citrate buffer
to set I tubes.

µl

Na3PO4

50 µl

Add 150 µl Citrate buffer
to set II tubes. Add 50 µl
Na3PO4 to set II tubes

Set II,
With inhibitor

20 Test Tubes

Total 250 µl for all tubes.
Vortex to mix thoroughly.
Set all reaction tubes and enzyme tube in 37oC water bath.
Incubate for 5 min.
Carry out step 3 by the water bath. See next page for details.
T = 0’, add 250µl Enzyme to assay tube, vortex, back to water
bath. Repeat every 30’ for the following tubes.
T = 10”, add 500µl NaOH to assay tube, vortex, remove from
water bath. Repeat every 30’ for the following tubes.
Back to your bench for step 4.
Tubes

En
zy
me

Set I,
No inhibitor

Na
OH

T = 0’, add 250µl Enzyme
to assay tube, vortex, back
to water bath. Repeat every
30’ for the following tubes.

T = 10”, add 500µl NaOH to
assay tube, vortex, remove
from water bath. Repeat every
30’ for the following tubes.
☆ Reaction time for each tube is

Set II,
With inhibitor

3

6

12

30

3’

6’

12’

30’ 60’

3+I

60

6+I 12+I 30+I 60+I

3’+I 6’+I 12’+I 30’+I 60’+I

0’,

2”,

4”,

6”,

8”,

10”,

12”,

14”,

16”,

18”,

30’,

2”30’

4”30’

6”30’

8”30’

10”30’ 12”30’
,
,
1”,

14”30’ 16”30’ 18”30’
,
,
,
,

,

,

3”,
11”,
1”30’

,

5”,

7”,

9”,

13”,

15”,

17”,

19”,

3”30’

5”30’

7”30’

9”30’
Add 2 ml d.H2O to each reaction tube. Vortex to mix.
Read OD 405nm.
405nm

ath
ht p
Lig

Sample
1
2
3
4
5
6
7
8
9
10

OD405
0.0451
0.0655
0.1136
0.1082
0.1967
0.2104
0.3898
0.3971
….
….

Make two Lineweaver-Burk plot in one graph. Estimate Vmax and Km in
the presence and absence of inhibitor. Identify what type inhibitor
sodium phosphate is.
Add 2 ml d.H2O to each reaction tube. Vortex to mix.
Read OD 405nm.
405nm

ath
ht p
Lig

Sample
1
2
3
4
5
6
7
8
9
10

OD405
0.0451
0.0655
0.1136
0.1082
0.1967
0.2104
0.3898
0.3971
….
….

Make two Lineweaver-Burk plot in one graph. Estimate Vmax and Km in
the presence and absence of inhibitor. Identify what type inhibitor
sodium phosphate is.

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Lab protocol exp 6

  • 1. Exp 6 Enzyme Kinetics of Acid Phosphatase Miss Huichun 2013/10/25 at TCU
  • 2. Label 20 test tubes. Add 50 µl pNPP of 3, 6, 12, 30, 60 mM to each tube. 3 6 12 30 60 50 µl 200 µl Set I, No inhibitor 0 15 Cit bu r at e ff e r Substrate [pNPP] Add 200 µl Citrate buffer to set I tubes. µl Na3PO4 50 µl Add 150 µl Citrate buffer to set II tubes. Add 50 µl Na3PO4 to set II tubes Set II, With inhibitor 20 Test Tubes Total 250 µl for all tubes. Vortex to mix thoroughly.
  • 3. Set all reaction tubes and enzyme tube in 37oC water bath. Incubate for 5 min. Carry out step 3 by the water bath. See next page for details. T = 0’, add 250µl Enzyme to assay tube, vortex, back to water bath. Repeat every 30’ for the following tubes. T = 10”, add 500µl NaOH to assay tube, vortex, remove from water bath. Repeat every 30’ for the following tubes. Back to your bench for step 4.
  • 4. Tubes En zy me Set I, No inhibitor Na OH T = 0’, add 250µl Enzyme to assay tube, vortex, back to water bath. Repeat every 30’ for the following tubes. T = 10”, add 500µl NaOH to assay tube, vortex, remove from water bath. Repeat every 30’ for the following tubes. ☆ Reaction time for each tube is Set II, With inhibitor 3 6 12 30 3’ 6’ 12’ 30’ 60’ 3+I 60 6+I 12+I 30+I 60+I 3’+I 6’+I 12’+I 30’+I 60’+I 0’, 2”, 4”, 6”, 8”, 10”, 12”, 14”, 16”, 18”, 30’, 2”30’ 4”30’ 6”30’ 8”30’ 10”30’ 12”30’ , , 1”, 14”30’ 16”30’ 18”30’ , , , , , , 3”, 11”, 1”30’ , 5”, 7”, 9”, 13”, 15”, 17”, 19”, 3”30’ 5”30’ 7”30’ 9”30’
  • 5. Add 2 ml d.H2O to each reaction tube. Vortex to mix. Read OD 405nm. 405nm ath ht p Lig Sample 1 2 3 4 5 6 7 8 9 10 OD405 0.0451 0.0655 0.1136 0.1082 0.1967 0.2104 0.3898 0.3971 …. …. Make two Lineweaver-Burk plot in one graph. Estimate Vmax and Km in the presence and absence of inhibitor. Identify what type inhibitor sodium phosphate is.
  • 6. Add 2 ml d.H2O to each reaction tube. Vortex to mix. Read OD 405nm. 405nm ath ht p Lig Sample 1 2 3 4 5 6 7 8 9 10 OD405 0.0451 0.0655 0.1136 0.1082 0.1967 0.2104 0.3898 0.3971 …. …. Make two Lineweaver-Burk plot in one graph. Estimate Vmax and Km in the presence and absence of inhibitor. Identify what type inhibitor sodium phosphate is.