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Mohamed Kamal Saleh

Home: Haj Shaaban Tower, level 10                     University: Zoology Dept, Faculty of Science
      Bata,                                                      University of Benha
      Benha                                                        Banha
      E-mail: mk_saleh1980@yahoo.com
      Mobile: 01117532985

Research
My main research interests lie in the field of molecular biology, more specifically in tumour
pathology and cell biology. During my post doctoral training in the University of Leeds, I have
examined the biochemistry of V (D) J recombination reactions, a process responsible for antibodies
production, and if gone wrong it causes lymphomas and leukemias. Achieving this project provided
me strong experience in the fields of chromatin research and immunology. Moreover I gained
extensive experiences in molecular cloning, site directed mutagenesis, western blotting and real time
PCR.

On the other hand, I have investigated the prognostic value and functional roles of a novel tumour
suppressor gene (CSMD1) for my PhD. Conducting such a project has given me wide range of skills
and experiences. I have mastered a wide range of molecular and cell biology techniques. I have
established shRNA stable cell lines, using cloning, to study the biological consequences of silencing
CSMD1 expression. Interestingly, I have found that loss of CSMD1 expression resulted in increased
cell proliferation, migration and invasion. In contrast, down regulation of CSMD1 expression caused
a decrease in cell adhesion and disruption of breast duct formation. Moreover, I have extensive
experience of immunohistochemistry and statistical analysis. I have identified that loss of CSMD1
protein expression is associated with poor prognosis in breast cancer patients.

Education

2010             PhD” Characterization of CSMD1 in Cancer”
                 Leeds Institute of Molecular Medicine, School of Medicine, University of Leeds,
                 UK.

                         To functionally characterise CSMD1, I have stably silenced CSMD1
                  expression in four cancer cell lines, using plasmid based RNAi (shRNA). Using
                  CSMD1 shRNA stable cell lines, I have performed wide range of cell based assays
                  to study cell morphology, size, proliferation, adhesion, migration and invasion.

                        In order to study the role of CSMD1 in cell differentiation and duct
                  formation of the mammary gland, I have established 3D matrigel models, using
                  MCF10A CSMD1 stable cell line. Using immunofluorescence, I have studied cell
                  cytoskeleton, polarity and apoptosis in the 3D models.

                         In order to evaluate CSMD1 as a prognostic factor, I have stained paraffin
                  embedded tissue microarrays for more than 400 breast cancer patients using
                  immunohistochemistry. Using univariate and multivariate analyses, I found that
                  loss of CSMD1 expression was associated with poor patient’s outcome and
                  considered an independent biomarker in breast cancer.

1997.2001         BSc in Zoology (First class honour degree), University of Benha, Egypt.

                                                  1
Work Experiences

July 2010- present     Lecturer of Molecular Biology in the department of Zoology, Faculty of Sciences
                     , University of Benha, Egypt.

                                      The main responsibilities of this post are to teach the molecular
                                      biology and molecular biology related courses to the
                                      undergraduate students. Also, to supervise demonstrators and
                                      teaching assistants while they deliver the practical to students. In
                                      addition, supervising final exams and marking students answer
                                      sheets.
                                      Moreover, I am supervising a Master student, who is conducting
                                      a research project under the title “Biochemical markers of
                                      hepatocellular carcinoma in hepatitis C virus infection combined
                                      with hepatic schistosomiasis”. In this project we aim to
                                      determine a better management tool for patients with liver
                                      cancer.
                                      On the other hand, I am conducting a research project funded by
                                      bibliotheca Alexandrina, Egypt and I am writing up a research
                                      proposal to be submitted to the STDF (under the reintegration
                                      programme). This project will investigate the causes and
                                      potential drugs of breast cancer in Egyptian women. If
                                      successful, the fund will cover me (a principle investigator) and
                                      two non phD holders (research assistants).

May 2010- present Post doctoral research fellow in the institute of Molecular and cellular Biology,
                   Faculty of Biological Sciences, University of Leeds, England, UK.

                                      In this post I have been investigated the molecular biology and
                                      biochemistry of the V(D)J recombination reactions. These
                                      reactions are involved in the production of antibodies and T cell
                                      receptors. The By-product of V(D)J recombination was thought
                                      for long time to be degraded during cell division. Recently, a
                                      group of researchers has shown that these By-products could
                                      reintegrate into the genome and cause genomic instability, which
                                      eventually will cause cancer (Lymphomas and leukaemia). Our
                                      aim is to understand the molecular mechanisms of these
                                      reintegrations and how to inhibit them. We believe that the
                                      results of this project will be the ground base for designing anti-
                                      Lymphomas and leukaemia drugs.

September 2006- May 2010              PhD student in the Leeds Institute of Molecular Medicine
                                        (LIMM), School of Medicine, University of Leeds, England,
                                        UK. This PhD studentship costed arround 1.5 million
                                       egyptian pounds and was funded by the Egyptian government.

February 2002- September 2006         Demonstrator in the Zoology Department, Faculty of
                                       Sciences, Benha University, Egypt.




                                                   2
Publications

Kamal, M., Shaaban, AM., Zhang, L., Wailker, C., Gray, S., Thakker, N., Speirs, V., and Bell, SM.
(2010) Loss of CSMD1 expression is associated with high tumour grade and poor survival in invasive
ductal breast carcinoma. Breast Cancer Res Treat. 2010 Jun;121(3):555-63

Towns, K., Kipioti, A., Long, V., McKibbin, M., Ehsani, P., Springell, Kelly., Kamal, M., Ramesar,
R., Mackey, D., Moore, A., Mukhopadhyay, R., Webster, A., Black, G., Sullivan, J., Pierce, E.,
Beggs, J., and Inglehearn, C (2010) Prognosis for splicing factor PRPF8 Retinitis pigmentosa and
correlation between human and yeast phenotypes. Human Mutation. 2010 May;31(5):E1361-76.

Kamal, M., Toomes, C., Holliday, D., Speirs, V., and Bell, SM. (2011) Loss of CSMD1 expression
enhances cell proliferation, migration and invasion but disrupts cell morphology, adhesion and
mammary duct formation. Cancer Research (submitted).

Richardson, J., Shaaban AM., Kamal, M., Alisary, R., Ellis, I., Speirs, V., Green, A., Bell, SM.
(2010) Identification of reduced MCPH1 expression in aggressive breast cancer. Breast Cancer Res
Treat. 2011 Jun;127(3):639-48

Kamal, M., Raiahi, S., Grabitchi, H., and Bell, SM. (2011) Loss of CSMD1 expression is associated
with poor prognosis in gastric carcinoma. J Pathology (in preparation)

Kirkham, C., Kamal, M., and Boyes J. (2011) A Potential New Mechanism by which V(D)J
Recombination Triggers Genome Instability (in preparation)




Laboratory skills:
Molecular biology such as DNA and RNA extraction, cloning (annealing, ligation, and transformation
reactions), plasmid DNA preparations (mini and large scales preps), Sequencing, PCR, genotyping,
reverse transcription reaction (RT), digesion reactions, gel extraction and real time PCR). Cell culture
techniques such as maintaining and freezing cells, DNA and RNA transfection, cell-based assays such
as adhesion, proliferation, migration, invasion, live cell labelling, co cultures and 3D models),
immunoflourescence, microscopy (epifluorescence, confocal and electron microscopy), and live-cell
imaging microscopy. Mice breading and dissection, Histology, and immunohistochemistry. I also
have extensive experiences in western blotting, site directed mutagenesis and have attended
workshops in ELISA.




                                                   3
Teaching skills:


2007-2010          Demonstrator, University of Leeds, UK.
                                          Supervise students to carry out the practical sessions of
                                histology, molecular biology and cell biology modules, along with
                                supporting and helping other students in the laboratory. Marking
                                student’s performance sheets.
                                          Supervising university placement students in Dr. Bell’s
                                group.


 2002- 2006         Demonstrator, University of Benha, Egypt.
                                        Delivering tutorials in histology, cell biology and
                               molecular biology to groups of 25 undergraduate students.

Computer experience

       Microsoft Word, Excel, PowerPoint, SPSS, real-time PCR software (for the ABI 7500 and
       7700 instruments), ScanScope, Volocity (time-lapse imaging software), Adobe Photoshop,
       DreamWeaver, SIPR and Science Warehouse purchasing systems.

   International Computer Driving Licence (ICDL).



Conferences and workshops

  2011                        Academic tutor for the credit hour teaching system, Benha, Egypt.
  2011                        Yorkshire Cancer Research annual meeting, Harrogate, England
                              (Poster)
  2011                         London annual chromatin meeting, Imperial college, London
  2010                         1st British Breast Cancer Research Conference, Nottingham, England
                              (Oral presentation)
  2010                         Breast Cancer Campaign annual meeting, London (Poster)
  2009                         Egyptian Cultural Bureau annual scientific meeting, London (oral
                               presentation)
  2009                         Annual North of England cell biology meeting, York (poster).
  2009                         Beatson International Cancer Conference, Glasgow (poster).
  2008                         Faculty of Medicine and Health annual meeting (oral presentation).
  2008                         Joint Meeting of the Pathological Society of Great Britain and
                               Ireland and the Dutch Pathological Society (2 posters).
  2008                         Breast Cancer Campaign (BCC) annual meeting, London.
  2007                         Intensive statistical course, University of Leeds.
  2006                         Health and safety course for working with genetically modified
                               organisms, University of Leeds.
  2005                         Electron microscopy workshop, Central laboratories, University of
                               Ain shams, Cairo, Egypt.
  2004                         PCR workshop, University of Ain shams, Cairo, Egypt.



                                                 4
Grants and Awards

  2010            The Bibliotheca Alexandrina post-doctoral research grant
  2009            Best achievers for the year (Egyptian embassy, London).

Languages

Native Arabic, fluent English and basics of French

Interests

                                          Reading and swimming
                                          Clean full UK driving licence
                                          Clean full Egyptian driving licence




                                                     5

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Mohamed kamal saleh_c_v (update oct 2011)

  • 1. Mohamed Kamal Saleh Home: Haj Shaaban Tower, level 10 University: Zoology Dept, Faculty of Science Bata, University of Benha Benha Banha E-mail: mk_saleh1980@yahoo.com Mobile: 01117532985 Research My main research interests lie in the field of molecular biology, more specifically in tumour pathology and cell biology. During my post doctoral training in the University of Leeds, I have examined the biochemistry of V (D) J recombination reactions, a process responsible for antibodies production, and if gone wrong it causes lymphomas and leukemias. Achieving this project provided me strong experience in the fields of chromatin research and immunology. Moreover I gained extensive experiences in molecular cloning, site directed mutagenesis, western blotting and real time PCR. On the other hand, I have investigated the prognostic value and functional roles of a novel tumour suppressor gene (CSMD1) for my PhD. Conducting such a project has given me wide range of skills and experiences. I have mastered a wide range of molecular and cell biology techniques. I have established shRNA stable cell lines, using cloning, to study the biological consequences of silencing CSMD1 expression. Interestingly, I have found that loss of CSMD1 expression resulted in increased cell proliferation, migration and invasion. In contrast, down regulation of CSMD1 expression caused a decrease in cell adhesion and disruption of breast duct formation. Moreover, I have extensive experience of immunohistochemistry and statistical analysis. I have identified that loss of CSMD1 protein expression is associated with poor prognosis in breast cancer patients. Education 2010 PhD” Characterization of CSMD1 in Cancer” Leeds Institute of Molecular Medicine, School of Medicine, University of Leeds, UK. To functionally characterise CSMD1, I have stably silenced CSMD1 expression in four cancer cell lines, using plasmid based RNAi (shRNA). Using CSMD1 shRNA stable cell lines, I have performed wide range of cell based assays to study cell morphology, size, proliferation, adhesion, migration and invasion. In order to study the role of CSMD1 in cell differentiation and duct formation of the mammary gland, I have established 3D matrigel models, using MCF10A CSMD1 stable cell line. Using immunofluorescence, I have studied cell cytoskeleton, polarity and apoptosis in the 3D models. In order to evaluate CSMD1 as a prognostic factor, I have stained paraffin embedded tissue microarrays for more than 400 breast cancer patients using immunohistochemistry. Using univariate and multivariate analyses, I found that loss of CSMD1 expression was associated with poor patient’s outcome and considered an independent biomarker in breast cancer. 1997.2001 BSc in Zoology (First class honour degree), University of Benha, Egypt. 1
  • 2. Work Experiences July 2010- present Lecturer of Molecular Biology in the department of Zoology, Faculty of Sciences , University of Benha, Egypt. The main responsibilities of this post are to teach the molecular biology and molecular biology related courses to the undergraduate students. Also, to supervise demonstrators and teaching assistants while they deliver the practical to students. In addition, supervising final exams and marking students answer sheets. Moreover, I am supervising a Master student, who is conducting a research project under the title “Biochemical markers of hepatocellular carcinoma in hepatitis C virus infection combined with hepatic schistosomiasis”. In this project we aim to determine a better management tool for patients with liver cancer. On the other hand, I am conducting a research project funded by bibliotheca Alexandrina, Egypt and I am writing up a research proposal to be submitted to the STDF (under the reintegration programme). This project will investigate the causes and potential drugs of breast cancer in Egyptian women. If successful, the fund will cover me (a principle investigator) and two non phD holders (research assistants). May 2010- present Post doctoral research fellow in the institute of Molecular and cellular Biology, Faculty of Biological Sciences, University of Leeds, England, UK. In this post I have been investigated the molecular biology and biochemistry of the V(D)J recombination reactions. These reactions are involved in the production of antibodies and T cell receptors. The By-product of V(D)J recombination was thought for long time to be degraded during cell division. Recently, a group of researchers has shown that these By-products could reintegrate into the genome and cause genomic instability, which eventually will cause cancer (Lymphomas and leukaemia). Our aim is to understand the molecular mechanisms of these reintegrations and how to inhibit them. We believe that the results of this project will be the ground base for designing anti- Lymphomas and leukaemia drugs. September 2006- May 2010 PhD student in the Leeds Institute of Molecular Medicine (LIMM), School of Medicine, University of Leeds, England, UK. This PhD studentship costed arround 1.5 million egyptian pounds and was funded by the Egyptian government. February 2002- September 2006 Demonstrator in the Zoology Department, Faculty of Sciences, Benha University, Egypt. 2
  • 3. Publications Kamal, M., Shaaban, AM., Zhang, L., Wailker, C., Gray, S., Thakker, N., Speirs, V., and Bell, SM. (2010) Loss of CSMD1 expression is associated with high tumour grade and poor survival in invasive ductal breast carcinoma. Breast Cancer Res Treat. 2010 Jun;121(3):555-63 Towns, K., Kipioti, A., Long, V., McKibbin, M., Ehsani, P., Springell, Kelly., Kamal, M., Ramesar, R., Mackey, D., Moore, A., Mukhopadhyay, R., Webster, A., Black, G., Sullivan, J., Pierce, E., Beggs, J., and Inglehearn, C (2010) Prognosis for splicing factor PRPF8 Retinitis pigmentosa and correlation between human and yeast phenotypes. Human Mutation. 2010 May;31(5):E1361-76. Kamal, M., Toomes, C., Holliday, D., Speirs, V., and Bell, SM. (2011) Loss of CSMD1 expression enhances cell proliferation, migration and invasion but disrupts cell morphology, adhesion and mammary duct formation. Cancer Research (submitted). Richardson, J., Shaaban AM., Kamal, M., Alisary, R., Ellis, I., Speirs, V., Green, A., Bell, SM. (2010) Identification of reduced MCPH1 expression in aggressive breast cancer. Breast Cancer Res Treat. 2011 Jun;127(3):639-48 Kamal, M., Raiahi, S., Grabitchi, H., and Bell, SM. (2011) Loss of CSMD1 expression is associated with poor prognosis in gastric carcinoma. J Pathology (in preparation) Kirkham, C., Kamal, M., and Boyes J. (2011) A Potential New Mechanism by which V(D)J Recombination Triggers Genome Instability (in preparation) Laboratory skills: Molecular biology such as DNA and RNA extraction, cloning (annealing, ligation, and transformation reactions), plasmid DNA preparations (mini and large scales preps), Sequencing, PCR, genotyping, reverse transcription reaction (RT), digesion reactions, gel extraction and real time PCR). Cell culture techniques such as maintaining and freezing cells, DNA and RNA transfection, cell-based assays such as adhesion, proliferation, migration, invasion, live cell labelling, co cultures and 3D models), immunoflourescence, microscopy (epifluorescence, confocal and electron microscopy), and live-cell imaging microscopy. Mice breading and dissection, Histology, and immunohistochemistry. I also have extensive experiences in western blotting, site directed mutagenesis and have attended workshops in ELISA. 3
  • 4. Teaching skills: 2007-2010 Demonstrator, University of Leeds, UK. Supervise students to carry out the practical sessions of histology, molecular biology and cell biology modules, along with supporting and helping other students in the laboratory. Marking student’s performance sheets. Supervising university placement students in Dr. Bell’s group. 2002- 2006 Demonstrator, University of Benha, Egypt. Delivering tutorials in histology, cell biology and molecular biology to groups of 25 undergraduate students. Computer experience Microsoft Word, Excel, PowerPoint, SPSS, real-time PCR software (for the ABI 7500 and 7700 instruments), ScanScope, Volocity (time-lapse imaging software), Adobe Photoshop, DreamWeaver, SIPR and Science Warehouse purchasing systems. International Computer Driving Licence (ICDL). Conferences and workshops 2011 Academic tutor for the credit hour teaching system, Benha, Egypt. 2011 Yorkshire Cancer Research annual meeting, Harrogate, England (Poster) 2011 London annual chromatin meeting, Imperial college, London 2010 1st British Breast Cancer Research Conference, Nottingham, England (Oral presentation) 2010 Breast Cancer Campaign annual meeting, London (Poster) 2009 Egyptian Cultural Bureau annual scientific meeting, London (oral presentation) 2009 Annual North of England cell biology meeting, York (poster). 2009 Beatson International Cancer Conference, Glasgow (poster). 2008 Faculty of Medicine and Health annual meeting (oral presentation). 2008 Joint Meeting of the Pathological Society of Great Britain and Ireland and the Dutch Pathological Society (2 posters). 2008 Breast Cancer Campaign (BCC) annual meeting, London. 2007 Intensive statistical course, University of Leeds. 2006 Health and safety course for working with genetically modified organisms, University of Leeds. 2005 Electron microscopy workshop, Central laboratories, University of Ain shams, Cairo, Egypt. 2004 PCR workshop, University of Ain shams, Cairo, Egypt. 4
  • 5. Grants and Awards 2010 The Bibliotheca Alexandrina post-doctoral research grant 2009 Best achievers for the year (Egyptian embassy, London). Languages Native Arabic, fluent English and basics of French Interests Reading and swimming Clean full UK driving licence Clean full Egyptian driving licence 5