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Medical parasitology
Laboratory
Lab 1
Laboratory diagnosis of parasitic
infections
Lecturer
Maysam A Mezher
 Parasite - one animal deriving its sustenance from
another without making compensation. The
uncompensated animal is the host.
 Parasitology - the science or study of host-parasite
relationships.
 Medical parasitology - study of parasites which infect
humans.
 Host - the partner providing food and/or protection. Some
parasites require more than one host to complete their life
cycle; Or may not require a host during some stage(s).
 Vector - “carrier” of a parasite from one host to another.
Often an insect.
 Diagnostic Stage:- A developmental stage of a pathogenic
organism that can be detected in stool, blood, urine,
sputum, CSF or other human body secretions.
 Infective Stage:- The stage of parasite at which it is
capable of entering the host and continue development
within the host .
 Symbiosis - “living together,” a close association between
two organisms.
 Mutualism - both organisms are benefited (bacteria in
bowel).
 Commensalism - “eating at the same table;” One
organism is benefited, the other is unaffected.
 Parasitism - one organism is benefited at the expense of
another (the host).
Classification of parasite
Diversity among Protozoa
 Modes of Infection
 Filth-borne or contaminative - where personal hygiene
and community sanitation lacking. Infectious stages
remain viable for long periods in contaminated soil.
 Soil or water-borne - water or dirt which can contain
eggs, etc.; Larvae can penetrate skin of bare feet or
enter skin in infested water.
 Food-borne - inadequately cooked beef, pork, fish, shell
fish.
 Arthropod-borne - the most difficult of all to control.
Mosquitoes transmitting malaria, etc.
Diagnosis of Parasitic Infections
1. Clinical
2. Laboratory
Purpose of laboratory diagnosis :
 Confirmation of clinical suspicion
 Identification of unsuspected infection
Specimens
- Stool
- Blood
- Serum and plasma
- Others (anal swab, duodenal aspirate, sputum, urine,
urogenital specimen)
- Tissues and aspirates
 The main ways in which laboratory diagnosis of
parasitic infections include:
 1) Microscopy:- the majority of intestinal, blood, urinary and skin
parasites are usually detected by microscopically in stained or
unstained; either directly or following concentrations.
 2) Culture:- only minority of parasitic infections are diagnosed
routinely by culture techniques. Relatively few of protozoa can be
cultured in a manner that is useful for laboratory identification.
 Other than strictly for research purpose , the only culture methods in
general use are for the isolation of such as E.histolytica, T.vaginalis,
T.cruzi and Leishmania species. are identified by this method.
3)Animal Inoculation
Not routinely done - expensive, time consuming, lacks sensitivity.
Use - primarily used for isolation of blood and tissue parasites
(trypanosomes, etc.).
Xenodiagnosis - may be considered a “special case” of animal
inoculation. The term was originally applied to the diagnosis of Chagas'
disease.
4)Immunoserologic Detection (Parasitic Serology Tests)
Test kits detect presence of antigen (organisms) or antibody - Those
detecting antigen are satisfactory but do not concentrate the amount of
antigen present.
Tests that measure antibody include - Enzyme Immunoassay (EIA),
Complement Fixation (CF), Latex Agglutination (LA), Direct & Indirect
Immunofluorescence (DIF & IIF), Indirect hemagglutination (IHA),
Bentonite flocculation (BF), Immunoblot (IB).
 5) Identification by Molecular Methods
 specimen can be analyzed using molecular techniques such
as polymerase chain reaction (PCR).
 PCR amplified fragments can be analyzed by using
restriction fragment length polymorphisms (RFLP) or DNA
sequencing if further characterization is needed. These
techniques to aid in identifecation of malaria,
toxoplasmosis, amebiasis and leishmaniasis.
Stool specimens
Sample collection:
 Sample is collected in clean, dry container
 Handled carefully
 Sometimes use preservative (10% formalin)
 Samples in some cases fresh(amoeba, ciliates)
 Liquid and soft stool examined within 15 min
 Not mixed with urine or disinfectant (as they will kill
trophozoites)
 Specimens obtained by enema or laxatives are often positive for
worm eggs or adult worm.
Stool examination
1- Macroscopic Examination
Stool specimen is examined with the naked eye for :
A- Presence of worms:- may have adult helminthes or segments
Example: Ascaris, Taenia species and gravid Taenia species.
B- Consistency (degree of moisture)- It varies in diet but certain
clinical conditions associated with parasite presence may be suggested by
particular consistencies. It will be described as hard, formed, semi-
formed and diarrhoeic ( watery). Cysts are usually found in fully
formed specimens and rarely seen in liquid stool.
C- Colour:- any abnormal color E.g., pale yellowish passed in
steatorrhoeac conditions such as gardiasis , dark or black-stools occur
when iron or bismuth is taken or when there is intestinal hemorrhage
D- Pathologic odor Offensive, non-offensive
E- Abnormal features seen (composition): mucus, blood or fat.
2-Microscopic examination.
 a) Direct wet mount.
 b) Concentration techniques.
 c) Permanent stained slides
a) Direct wet mount.
Routine microscopic examination of stool specimen with physiological
saline and iodine solution helps to detect and identify the stages of some
parasitic organisms.
- Material and Methods
- Wooden applicator sticks
- Microscopic slides
- Cover slips
- Dropping bottles containing physiological saline(0.85%w/v) and Dobell's
- Iodine solutions
- Microscope
 Procedure
 1. Place a drop of physiological saline or a drop of Iodine solution in the
center of the slide.
 2. With an applicator stick, pick up a small portion of the feces
(Approximately 2mg which is about the size of a match head) and put on
the drop of saline. Add a similar portion of stool sample to the drop of
iodine.
 3. Mix the feces with the drops to form homogeneous suspensions.
 4. Cover drop with a cover slip by holding the cover slip and gently lowering
the cover slip onto the slide so that air bubbles are not produced.
 5. Examine the saline preparations using the 10X objective for motile forms,
cyst and oocyst of intestinal protozoa and for any ova or larva of helminths.
 6. Examine the iodine solution preparation using 40X objective to identify
the cyst stages of protozoa. The iodine will stain the nuclei and the glycogen
mass of the cyst.
b) Concentration techniques.
 Many concentration methods have been employed all of which
attempt to separate protozoan cysts and helminth eggs from the
bulk of fecal material through differences in specific gravity .
The methods fall into 2 general classes:
 Sedimentation technique in which various eggs and cysts which
are heavier than the suspending liquid, become concentrated in
the bottom of the tube (e.g. formalin-ether sedimentation in which
formalin fix and preserve the fecal specimen and ether to decrease
the specific gravity of small fecal particles , causing non-absorbable
elements are left at the bottom, including eggs and cysts of
parasites.
 Floating technique involves the use of heavy liquid to the surface
of which the lighter parasites rise. e.g. (zinc sulphate floating)
c) Permanent stained slides
 Permanently Stained Smears - aimed at trophozoite stages,
and are most useful in the identification of organisms.
 Modified Ziehl-Neelsen staining of fecal smear helps to
detect oocysts of Cryptosporidium ,trichrome stain and
Gemisa stain for staining protozoa
Material and Methods:
 - Carbol fuchsin stain
 - 0.25% Malachite green ( Methylene blue)
 - 1% acid alcohol
 - Slides
 - Cover slip
 - Microscope
Procedure
 1. Prepare a thin fecal smear on a slide then air dry.
 2. Fix the smear with methanol for 2-3 minutes.
 3. Stain the smear with cold carbol fuchsin for 5-10
minutes.
 4. Wash off then stain with clean tap water.
 5. Decolorize with 1% acid alcohol for 10-15' until color
ceases to flow out of the smear.
 6. Rinse in tap water and counter stain with 0.5% malachite
green (or methylene blue) for 30'
 7. Wash off the stain with tap water.
 8. Stand the slide in a draining rack for the smear to dry.
 9. Examine the smear microscopically using 100X objective
to detect and identify oocyst.
Blood specimens
Collection of Blood specimens:
 Finger, heel or earlobe sticks - preferred for thick and
thin blood smears.
 EDTA samples - best if smear made within one hour.
 Sodium citrate specimens - used for larger amounts of
blood to be used in concentration or cultivation.
 Clot tubes - for serological procedures; lets clot retract.
Examination of Blood Samples:
 Wet Mounts - screening for motile organisms
(trypanosomes & filariae).
 Permanent Stained Smears: Stains - are methylene blue-
eosin , Wright's stain and Giemsa
Thick and Thin Blood Films:
Will detect - malaria parasites, trypanosomes, and microfilariae.
Anal Swabs /
 Scotch Tape Preparation for Enterobius vermicularis - must be
collected in the morning prior to bathing or bowel movement; used for
diagnosis of pinworm infections but other helminth eggs can be seen also,
especially Taenia spp. eggs.
 Procedure - make impressions with sticky paddle or clear cellophane
tape around the anus of the patient; examine for eggs under the
microscope.
Urogenital Specimens:
 Trichomonas vaginalis - vaginal, urethral, prostatic exudates are
examined via wet mounts, looking for motile organisms.
Urine Specimens:
T. vaginalis - often seen in urine of infected individuals.
Schistosoma hematobium - inhabits blood vessels around the
urinary bladder, eggs “pop” into bladder as result of expansion and
contraction of the bladder along with the aid of a terminal spine on
the egg. The specimen should be immediately centrifuged at 400 × g
and the sediment examined by wet mount.
Sputum Specimens:
 Paragonimus westermani (the lung fluke) - the worm lives in
lung tissue; eggs are shed into alveoli, and are present in the
sputum.
 Ascaris lumbricoides, can be present in sputum as a result of
lung migration.
 Add on a sputum sample equal volume of NaOH to dissolve the
mucus. Leave this combination for a while, then centrifuge at
200xg for 5 minutes , then examine the sediment.
aspirates - usually for extra-intestinal amoebiasis (wall of
abscess is best area to examine) and Giardia lamblia.
Biopsies:
 Muscle - Direct microscopic examination for presence of
Trichinella spiralis larvae.
 Intestinal or bladder mucosa - Direct microscopic
examination for Schistosoma spp. eggs.

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lab_1introduction_and_diagnosis_of_parasite.pdf

  • 1. Medical parasitology Laboratory Lab 1 Laboratory diagnosis of parasitic infections Lecturer Maysam A Mezher
  • 2.  Parasite - one animal deriving its sustenance from another without making compensation. The uncompensated animal is the host.  Parasitology - the science or study of host-parasite relationships.  Medical parasitology - study of parasites which infect humans.  Host - the partner providing food and/or protection. Some parasites require more than one host to complete their life cycle; Or may not require a host during some stage(s).  Vector - “carrier” of a parasite from one host to another. Often an insect.
  • 3.  Diagnostic Stage:- A developmental stage of a pathogenic organism that can be detected in stool, blood, urine, sputum, CSF or other human body secretions.  Infective Stage:- The stage of parasite at which it is capable of entering the host and continue development within the host .  Symbiosis - “living together,” a close association between two organisms.  Mutualism - both organisms are benefited (bacteria in bowel).  Commensalism - “eating at the same table;” One organism is benefited, the other is unaffected.  Parasitism - one organism is benefited at the expense of another (the host).
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  • 7.  Modes of Infection  Filth-borne or contaminative - where personal hygiene and community sanitation lacking. Infectious stages remain viable for long periods in contaminated soil.  Soil or water-borne - water or dirt which can contain eggs, etc.; Larvae can penetrate skin of bare feet or enter skin in infested water.  Food-borne - inadequately cooked beef, pork, fish, shell fish.  Arthropod-borne - the most difficult of all to control. Mosquitoes transmitting malaria, etc.
  • 8. Diagnosis of Parasitic Infections 1. Clinical 2. Laboratory Purpose of laboratory diagnosis :  Confirmation of clinical suspicion  Identification of unsuspected infection Specimens - Stool - Blood - Serum and plasma - Others (anal swab, duodenal aspirate, sputum, urine, urogenital specimen) - Tissues and aspirates
  • 9.  The main ways in which laboratory diagnosis of parasitic infections include:  1) Microscopy:- the majority of intestinal, blood, urinary and skin parasites are usually detected by microscopically in stained or unstained; either directly or following concentrations.  2) Culture:- only minority of parasitic infections are diagnosed routinely by culture techniques. Relatively few of protozoa can be cultured in a manner that is useful for laboratory identification.  Other than strictly for research purpose , the only culture methods in general use are for the isolation of such as E.histolytica, T.vaginalis, T.cruzi and Leishmania species. are identified by this method.
  • 10. 3)Animal Inoculation Not routinely done - expensive, time consuming, lacks sensitivity. Use - primarily used for isolation of blood and tissue parasites (trypanosomes, etc.). Xenodiagnosis - may be considered a “special case” of animal inoculation. The term was originally applied to the diagnosis of Chagas' disease. 4)Immunoserologic Detection (Parasitic Serology Tests) Test kits detect presence of antigen (organisms) or antibody - Those detecting antigen are satisfactory but do not concentrate the amount of antigen present. Tests that measure antibody include - Enzyme Immunoassay (EIA), Complement Fixation (CF), Latex Agglutination (LA), Direct & Indirect Immunofluorescence (DIF & IIF), Indirect hemagglutination (IHA), Bentonite flocculation (BF), Immunoblot (IB).
  • 11.  5) Identification by Molecular Methods  specimen can be analyzed using molecular techniques such as polymerase chain reaction (PCR).  PCR amplified fragments can be analyzed by using restriction fragment length polymorphisms (RFLP) or DNA sequencing if further characterization is needed. These techniques to aid in identifecation of malaria, toxoplasmosis, amebiasis and leishmaniasis.
  • 12. Stool specimens Sample collection:  Sample is collected in clean, dry container  Handled carefully  Sometimes use preservative (10% formalin)  Samples in some cases fresh(amoeba, ciliates)  Liquid and soft stool examined within 15 min  Not mixed with urine or disinfectant (as they will kill trophozoites)  Specimens obtained by enema or laxatives are often positive for worm eggs or adult worm.
  • 13. Stool examination 1- Macroscopic Examination Stool specimen is examined with the naked eye for : A- Presence of worms:- may have adult helminthes or segments Example: Ascaris, Taenia species and gravid Taenia species. B- Consistency (degree of moisture)- It varies in diet but certain clinical conditions associated with parasite presence may be suggested by particular consistencies. It will be described as hard, formed, semi- formed and diarrhoeic ( watery). Cysts are usually found in fully formed specimens and rarely seen in liquid stool. C- Colour:- any abnormal color E.g., pale yellowish passed in steatorrhoeac conditions such as gardiasis , dark or black-stools occur when iron or bismuth is taken or when there is intestinal hemorrhage D- Pathologic odor Offensive, non-offensive E- Abnormal features seen (composition): mucus, blood or fat.
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  • 15. 2-Microscopic examination.  a) Direct wet mount.  b) Concentration techniques.  c) Permanent stained slides a) Direct wet mount. Routine microscopic examination of stool specimen with physiological saline and iodine solution helps to detect and identify the stages of some parasitic organisms. - Material and Methods - Wooden applicator sticks - Microscopic slides - Cover slips - Dropping bottles containing physiological saline(0.85%w/v) and Dobell's - Iodine solutions - Microscope
  • 16.  Procedure  1. Place a drop of physiological saline or a drop of Iodine solution in the center of the slide.  2. With an applicator stick, pick up a small portion of the feces (Approximately 2mg which is about the size of a match head) and put on the drop of saline. Add a similar portion of stool sample to the drop of iodine.  3. Mix the feces with the drops to form homogeneous suspensions.  4. Cover drop with a cover slip by holding the cover slip and gently lowering the cover slip onto the slide so that air bubbles are not produced.  5. Examine the saline preparations using the 10X objective for motile forms, cyst and oocyst of intestinal protozoa and for any ova or larva of helminths.  6. Examine the iodine solution preparation using 40X objective to identify the cyst stages of protozoa. The iodine will stain the nuclei and the glycogen mass of the cyst.
  • 17. b) Concentration techniques.  Many concentration methods have been employed all of which attempt to separate protozoan cysts and helminth eggs from the bulk of fecal material through differences in specific gravity . The methods fall into 2 general classes:  Sedimentation technique in which various eggs and cysts which are heavier than the suspending liquid, become concentrated in the bottom of the tube (e.g. formalin-ether sedimentation in which formalin fix and preserve the fecal specimen and ether to decrease the specific gravity of small fecal particles , causing non-absorbable elements are left at the bottom, including eggs and cysts of parasites.  Floating technique involves the use of heavy liquid to the surface of which the lighter parasites rise. e.g. (zinc sulphate floating)
  • 18. c) Permanent stained slides  Permanently Stained Smears - aimed at trophozoite stages, and are most useful in the identification of organisms.  Modified Ziehl-Neelsen staining of fecal smear helps to detect oocysts of Cryptosporidium ,trichrome stain and Gemisa stain for staining protozoa Material and Methods:  - Carbol fuchsin stain  - 0.25% Malachite green ( Methylene blue)  - 1% acid alcohol  - Slides  - Cover slip  - Microscope
  • 19. Procedure  1. Prepare a thin fecal smear on a slide then air dry.  2. Fix the smear with methanol for 2-3 minutes.  3. Stain the smear with cold carbol fuchsin for 5-10 minutes.  4. Wash off then stain with clean tap water.  5. Decolorize with 1% acid alcohol for 10-15' until color ceases to flow out of the smear.  6. Rinse in tap water and counter stain with 0.5% malachite green (or methylene blue) for 30'  7. Wash off the stain with tap water.  8. Stand the slide in a draining rack for the smear to dry.  9. Examine the smear microscopically using 100X objective to detect and identify oocyst.
  • 20. Blood specimens Collection of Blood specimens:  Finger, heel or earlobe sticks - preferred for thick and thin blood smears.  EDTA samples - best if smear made within one hour.  Sodium citrate specimens - used for larger amounts of blood to be used in concentration or cultivation.  Clot tubes - for serological procedures; lets clot retract. Examination of Blood Samples:  Wet Mounts - screening for motile organisms (trypanosomes & filariae).  Permanent Stained Smears: Stains - are methylene blue- eosin , Wright's stain and Giemsa
  • 21. Thick and Thin Blood Films: Will detect - malaria parasites, trypanosomes, and microfilariae.
  • 22. Anal Swabs /  Scotch Tape Preparation for Enterobius vermicularis - must be collected in the morning prior to bathing or bowel movement; used for diagnosis of pinworm infections but other helminth eggs can be seen also, especially Taenia spp. eggs.  Procedure - make impressions with sticky paddle or clear cellophane tape around the anus of the patient; examine for eggs under the microscope. Urogenital Specimens:  Trichomonas vaginalis - vaginal, urethral, prostatic exudates are examined via wet mounts, looking for motile organisms.
  • 23. Urine Specimens: T. vaginalis - often seen in urine of infected individuals. Schistosoma hematobium - inhabits blood vessels around the urinary bladder, eggs “pop” into bladder as result of expansion and contraction of the bladder along with the aid of a terminal spine on the egg. The specimen should be immediately centrifuged at 400 × g and the sediment examined by wet mount. Sputum Specimens:  Paragonimus westermani (the lung fluke) - the worm lives in lung tissue; eggs are shed into alveoli, and are present in the sputum.  Ascaris lumbricoides, can be present in sputum as a result of lung migration.  Add on a sputum sample equal volume of NaOH to dissolve the mucus. Leave this combination for a while, then centrifuge at 200xg for 5 minutes , then examine the sediment.
  • 24. aspirates - usually for extra-intestinal amoebiasis (wall of abscess is best area to examine) and Giardia lamblia. Biopsies:  Muscle - Direct microscopic examination for presence of Trichinella spiralis larvae.  Intestinal or bladder mucosa - Direct microscopic examination for Schistosoma spp. eggs.