eROSA has received funding from the European
Union’s Horizon 2020 research and innovation
programme under grant agreement No 730988
E-infrastructure for open agri-food
sciences – The landscape
Odile Hologne, INRA, Head of the department of scientific information
eROSA coordinator @Holo_08
@H2020_eROSA
http://www.erosa.aginfra.eu/
Methodology
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Based on synergies of different activities
e-ROSA activities : bibliometric analysis,
mapping, workshops
RDA activities : working groups
GODAN activities
Projects : Aginfra+, OpenMinted, WheatIS,
GODAN Action …
Global knowledge of the ecosystem linked to
FAO activities and other partners
http://www.aginfra.eu/discover
http://www.aginfra.eu
Content :
 Organisations: the organisations (e.g. research performing
organisations, ministries, international organisations) within the e-
ROSA scope; “data producers”, “data experts” , “data policy”
 Initiatives: Projects, networks and other initiatives within the e-ROSA
scope
 Data points: all forms of data sources directly or indirectly providing
access to data in the field of agriculture and food ; answers the
question “how to get data?”
 Facilities: research infrastructures and e-infrastructures that provide
one or several types of data services (e.g. modeling infrastructures,
data management infrastructures, etc.); answers the question “what
can you do with data?”
Issue to define the data services
http://einfracentral.eu/basic-page/e-infrastructure-catalogue-
alignment
https://www.rd-alliance.org/groups/mapping-landscape-ig
AgINFRA/e-ROSA online map
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
How to analyze the technical ecosystem ?
https://www.rd-alliance.org/sites/default/files/recommendation-jan-2017-v8.pdf
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
E-infra conceptuel framework to understand the
ecosystem
Some results
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Main ideas
Massive data production in labs (sensors,
robots, models ….) but also in farms or by
citizens (of huge interest for science)
 Big data : more variety than volume
 space, time and scale issues
Data silos, poorly documented
Not easy to find, nor to access
Different level of maturity of the practices
about data (management, sharing, analysis)
Federation of Plant Information systems
Data end points
INRA
VIB
WUR
...
Data Cache
Data Harvester Web
Service
Web User
interface
Batch
Download
BrAPI-based improved plant portal
+ Validation tools
Focused on phenotyping data
Improve/complete a common
BrAPI/MIAPPE compliant
data model
www.brapi.org
www.miappe.org
Source : Hadi Quesneville, INRA
Horizon 2020 research and innovation programme - grant agreement No 730988
4th RDA Europe Science workshop 25-26 April 2017
Data practices
Drawings sources :
https://rd-alliance.org/plenary-meetings/fourth-
plenary/plenary-cartoons.html
Survey : Wheat data interoperability WG, RDA
https://www.rd-alliance.org/groups/wheat-data-
interoperability-wg.html
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Some of the gems
Data repositories +/- open
Data catalog : http://ring.ciard.net/
Resources catalog: semantics, metadata
http://vest.agrisemantics.org
http://agroportal.lirmm.fr/
http://agrisemantics.org/
GACS
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Implementation Status of key services
https://eoscpilot.eu/content/erosa-position-paper
Johannes Keizer, e-ROSA project
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Potential Governance and business model issues
Certification rules and mechanism
Business model for the « common goods » such as semantic core,
discovery services …
https://eoscpilot.eu/content/erosa-position-paper
Johannes Keizer, e-ROSA project
Horizon 2020 research and innovation programme - grant agreement No 730988
E-ROSA 3rd Workshop, Athens, May 2018
Current landscape: Challenges
Technical challenges
Generic
Content-dependent
(agri-food)
Long-term preservation
Data processing
Authentication and access rights
Data types
……
Semantics - standards
From genes to ecosytem
Public and private stakeholders
Registry of services
….
Cultural challenges
Community engagement and incentives
Policies, regulation, certification specially for services
Sustainability and governance
Require-
ments
Asses-
sment
Certification
communi
cation
CONSORTIUM
WWW.EROSA.AGINFRA.EU
Thank you for your attention!
odile.hologne@inra.fr
@Holo_08
@H2020_eROSA

E-Infrastructure for open agri-food sciences - The landscape

  • 1.
    eROSA has receivedfunding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 730988 E-infrastructure for open agri-food sciences – The landscape Odile Hologne, INRA, Head of the department of scientific information eROSA coordinator @Holo_08 @H2020_eROSA http://www.erosa.aginfra.eu/
  • 2.
  • 3.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Based on synergies of different activities e-ROSA activities : bibliometric analysis, mapping, workshops RDA activities : working groups GODAN activities Projects : Aginfra+, OpenMinted, WheatIS, GODAN Action … Global knowledge of the ecosystem linked to FAO activities and other partners
  • 4.
    http://www.aginfra.eu/discover http://www.aginfra.eu Content :  Organisations:the organisations (e.g. research performing organisations, ministries, international organisations) within the e- ROSA scope; “data producers”, “data experts” , “data policy”  Initiatives: Projects, networks and other initiatives within the e-ROSA scope  Data points: all forms of data sources directly or indirectly providing access to data in the field of agriculture and food ; answers the question “how to get data?”  Facilities: research infrastructures and e-infrastructures that provide one or several types of data services (e.g. modeling infrastructures, data management infrastructures, etc.); answers the question “what can you do with data?” Issue to define the data services http://einfracentral.eu/basic-page/e-infrastructure-catalogue- alignment https://www.rd-alliance.org/groups/mapping-landscape-ig AgINFRA/e-ROSA online map
  • 5.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 How to analyze the technical ecosystem ? https://www.rd-alliance.org/sites/default/files/recommendation-jan-2017-v8.pdf
  • 6.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 E-infra conceptuel framework to understand the ecosystem
  • 7.
  • 8.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Main ideas Massive data production in labs (sensors, robots, models ….) but also in farms or by citizens (of huge interest for science)  Big data : more variety than volume  space, time and scale issues Data silos, poorly documented Not easy to find, nor to access Different level of maturity of the practices about data (management, sharing, analysis)
  • 9.
    Federation of PlantInformation systems Data end points INRA VIB WUR ... Data Cache Data Harvester Web Service Web User interface Batch Download BrAPI-based improved plant portal + Validation tools Focused on phenotyping data Improve/complete a common BrAPI/MIAPPE compliant data model www.brapi.org www.miappe.org Source : Hadi Quesneville, INRA
  • 10.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 4th RDA Europe Science workshop 25-26 April 2017 Data practices Drawings sources : https://rd-alliance.org/plenary-meetings/fourth- plenary/plenary-cartoons.html Survey : Wheat data interoperability WG, RDA https://www.rd-alliance.org/groups/wheat-data- interoperability-wg.html
  • 11.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Some of the gems Data repositories +/- open Data catalog : http://ring.ciard.net/ Resources catalog: semantics, metadata http://vest.agrisemantics.org http://agroportal.lirmm.fr/ http://agrisemantics.org/ GACS
  • 12.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Implementation Status of key services https://eoscpilot.eu/content/erosa-position-paper Johannes Keizer, e-ROSA project
  • 13.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Potential Governance and business model issues Certification rules and mechanism Business model for the « common goods » such as semantic core, discovery services … https://eoscpilot.eu/content/erosa-position-paper Johannes Keizer, e-ROSA project
  • 14.
    Horizon 2020 researchand innovation programme - grant agreement No 730988 E-ROSA 3rd Workshop, Athens, May 2018 Current landscape: Challenges Technical challenges Generic Content-dependent (agri-food) Long-term preservation Data processing Authentication and access rights Data types …… Semantics - standards From genes to ecosytem Public and private stakeholders Registry of services …. Cultural challenges Community engagement and incentives Policies, regulation, certification specially for services Sustainability and governance Require- ments Asses- sment Certification communi cation
  • 15.
    CONSORTIUM WWW.EROSA.AGINFRA.EU Thank you foryour attention! odile.hologne@inra.fr @Holo_08 @H2020_eROSA