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New Frontiers in Data
Science – the role of
automation in
accelerating scientific
discovery
Georges Heiter
BioData Congress, 4th Dec 2019
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
AUTOMATION
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Foundation Technology Maturity Cycle
Insular Divergent Standardized Ubiquitous
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Mechanized Automation
18001739
Digesting Duck Automation
Jacques de Vaucanson (French)
WOW, he made this!
Draughtsman-Writer Automation
Henri Maillardet (Swiss)
1837
Programmable Computer
Charles Babbage (English)
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
The steam engine enabled automation and mass production of goods
18021712
Atmospheric Engine
Thomas Newcomen (English)
Locomotive Steam Engine
Richard Trevithick (English)
transportation
Voilà!
1870
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Electricity brought automation into the mainstream
19301870
commercial power
generation was established
Now
>600 quadrillion
BTUs used
globally powering
almost everything
we do today
widespread adoption took until the 1930s, with electric
illumination and other electric appliances becoming common place
in households
Electrical Appliances
❖ Promised to be more efficient
❖ Less time consuming
❖ More manageable than servants
❖ Were called electrical servants
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Internet
19861969
ARPANET become
functional
1989 1995
NSF connects
NSFnet to
ARPANET and
becomes known
as the internet
TCP/IP
World wide web
created
Age of eCommerce
and social media has
begun
Now
Today more than
4.5 billion people
are online
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
From steam to cyber, resulting automation impacts shape civilization
Electricity /
Oil / Gas
Energy abundance
Mass Production
Globalization of
Supply and Demand
Mechanization /
Steam Power
Mobility / Transportation
Mechanized Production
Factory Workers
Electronics /
Robotics / Internet
Online Services
Automated and
individualized on-
demand production
Labor Arbitrage
Foundation Automation Impact
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
What’s next?
Foundation Outcome Impact
Digitalization Convergence between
physical and virtual
Teams of Human and
Machine Workers
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
So where are we today?
Insular Divergent
?
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Humans are manually involved in every step of the research process
Bulk of energy is still spent on finding and preparing data for analysis
Metadata about digital assets and the operations upon them is mostly not being
captured
→ research not easily repeatable or automatable
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Digital Overlay
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
The digital overlay is required for the machine actionable network
Enabling fabric
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Page ▪ 14
Knowledge network built from data and metadata is key to unlocking digital potential
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Databiology Approach
Federated Data Management
Knowledge Engine
App
1
App
n
App
2
Source
1
Source
2
Source
n
Process Orchestration
INFRASTRUCTURE
DATA
APPLICATIONS
PEOPLE,ORGS&POLICIES
Orchestration
Engine
Compute Site
Input Data
Application
Contextually Aware
Research Assistant
Delivers Intelligent Automation
Automatically routes to
and executes analysis
on the most suitable
infrastructure
Automatically extracts
insights and feeds them
back into the
knowledge network
Recognizes and suggests
analysis apps based on
contextual data
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Digital Research Environments
Data Commons
Digital Clinical Trials Platform
Patient Data Gateway
Metadata Management
Data Interoperation Platform
Intelligent Automation
Digital
Science
Digital
Foundation
Digital
Health
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
What will the evolution of digitalization, mean for you?
How researchers spend their time
Design / Develop / DiscoverFind + Prepare Data Run Analysis
Today Future
Manual Intelligent Automation
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
Automation will free researchers to focus on higher level tasks
Machines will take over manual labor intensive functions to allow researchers to focus on ideation and creativity
for LOWER COST PER INSIGHT
Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
SO WHAT?
BECAUSE IT IMPACTS YOU!
OR

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Biodata Congress Databiology Key Note Presentation

  • 1. New Frontiers in Data Science – the role of automation in accelerating scientific discovery Georges Heiter BioData Congress, 4th Dec 2019
  • 2. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. AUTOMATION
  • 3. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Foundation Technology Maturity Cycle Insular Divergent Standardized Ubiquitous
  • 4. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Mechanized Automation 18001739 Digesting Duck Automation Jacques de Vaucanson (French) WOW, he made this! Draughtsman-Writer Automation Henri Maillardet (Swiss) 1837 Programmable Computer Charles Babbage (English)
  • 5. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. The steam engine enabled automation and mass production of goods 18021712 Atmospheric Engine Thomas Newcomen (English) Locomotive Steam Engine Richard Trevithick (English) transportation Voilà! 1870
  • 6. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Electricity brought automation into the mainstream 19301870 commercial power generation was established Now >600 quadrillion BTUs used globally powering almost everything we do today widespread adoption took until the 1930s, with electric illumination and other electric appliances becoming common place in households Electrical Appliances ❖ Promised to be more efficient ❖ Less time consuming ❖ More manageable than servants ❖ Were called electrical servants
  • 7. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Internet 19861969 ARPANET become functional 1989 1995 NSF connects NSFnet to ARPANET and becomes known as the internet TCP/IP World wide web created Age of eCommerce and social media has begun Now Today more than 4.5 billion people are online
  • 8. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. From steam to cyber, resulting automation impacts shape civilization Electricity / Oil / Gas Energy abundance Mass Production Globalization of Supply and Demand Mechanization / Steam Power Mobility / Transportation Mechanized Production Factory Workers Electronics / Robotics / Internet Online Services Automated and individualized on- demand production Labor Arbitrage Foundation Automation Impact
  • 9. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. What’s next? Foundation Outcome Impact Digitalization Convergence between physical and virtual Teams of Human and Machine Workers
  • 10. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. So where are we today? Insular Divergent ?
  • 11. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Humans are manually involved in every step of the research process Bulk of energy is still spent on finding and preparing data for analysis Metadata about digital assets and the operations upon them is mostly not being captured → research not easily repeatable or automatable
  • 12. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Digital Overlay
  • 13. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. The digital overlay is required for the machine actionable network Enabling fabric
  • 14. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Page ▪ 14 Knowledge network built from data and metadata is key to unlocking digital potential
  • 15. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Databiology Approach Federated Data Management Knowledge Engine App 1 App n App 2 Source 1 Source 2 Source n Process Orchestration INFRASTRUCTURE DATA APPLICATIONS PEOPLE,ORGS&POLICIES Orchestration Engine Compute Site Input Data Application
  • 16. Contextually Aware Research Assistant Delivers Intelligent Automation Automatically routes to and executes analysis on the most suitable infrastructure Automatically extracts insights and feeds them back into the knowledge network Recognizes and suggests analysis apps based on contextual data Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd.
  • 17. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Digital Research Environments Data Commons Digital Clinical Trials Platform Patient Data Gateway Metadata Management Data Interoperation Platform Intelligent Automation Digital Science Digital Foundation Digital Health
  • 18. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. What will the evolution of digitalization, mean for you? How researchers spend their time Design / Develop / DiscoverFind + Prepare Data Run Analysis Today Future Manual Intelligent Automation
  • 19. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. Automation will free researchers to focus on higher level tasks Machines will take over manual labor intensive functions to allow researchers to focus on ideation and creativity for LOWER COST PER INSIGHT
  • 20. Copyright ©2019. All Rights Reserved. Confidential Databiology Ltd. SO WHAT? BECAUSE IT IMPACTS YOU! OR