This document summarizes a study that investigated how mechanical stressing of integrin receptors affects tyrosine phosphorylation in osteoblastic cells. The key findings were:
1) Mechanical stressing of both the β1 and α2 integrin subunits induced enhanced tyrosine phosphorylation of proteins compared to integrin clustering alone.
2) Applying cyclic forces at 1 Hz was more effective at inducing tyrosine phosphorylation than continuous stress.
3) Mechanically stressed cells showed tyrosine-phosphorylated proteins becoming anchored to the cytoskeleton in a calcium-dependent manner.
4) Mechanical stressing of integrins also increased phosphorylation of MAP kinases, suggesting it can induce downstream signaling events.
KDM5 epigenetic modifiers as a focus for drug discoveryChristopher Wynder
A summary presentation of my scientific work.
My laboratory focused on an enzyme KDM5b (aka PLU-1, JARID1b) that was widely expressed during development and played a key role in progression of breast cancer through HER-2.
My lab focused on understanding the key biochemical activity of the enzyme through dissecting the proteomic and genomic interactors.
Our results were confirmed through the use of ES cells, adult stem cells and mouse models.
Much of this work remains unpublished, please contact me for more information and/or access to any reagents that I still have as part of this work.
crwynder@gmail.com
This document discusses a study examining the role of metallothionein-I/II (MT-I/II) in promoting axonal regeneration in the central nervous system after injury. The key findings are:
1) MT-I/II can overcome inhibition by myelin and myelin-associated glycoprotein (MAG) to promote neurite outgrowth from cortical, hippocampal and dorsal root ganglion neurons in vitro.
2) Intrathecal delivery of MT-I/II to dorsal root ganglion neurons promotes neurite outgrowth in the presence of MAG.
3) Mice deficient in MT-I/II show reduced neurite outgrowth on MAG and fail to regener
Temporal-Spatial Expressions of Spy1 in Rat Sciatic Nerve After CrushJiao Yang
1. The study examined the expression of the cell cycle protein Spy1 in a rat sciatic nerve crush injury model over time.
2. Spy1 expression was found to gradually increase after injury, peaking at day 3, due to increased expression in both axons and Schwann cells.
3. Spy1 expression correlated with Schwann cell proliferation after injury and Spy1 was found to localize in axons in the injured segment but did not co-localize with the growth protein GAP43.
This document summarizes recent developments in small molecule epigenetic drugs. It discusses four DNA methyltransferase (DNMT) inhibitors approved by the FDA, including Vidaza and Decitabine. It also discusses two histone deacetylase (HDAC) inhibitors approved, Vorinostat and Romidepsin. Other epigenetic targets discussed include Sirtuins, histone methyltransferases, and protein arginine methyltransferases. The document reviews the development stages of small molecules related to epigenetics and their role in disease development and progression. It provides examples of epigenetic targets disrupted in cancer and structures of common HDAC and other epigenetic inhibitors. In conclusion, it states that HDAC inhibitors
The document discusses various topics related to DNA methylation and its role in human pathology. It begins by describing the MeCP2 protein and its involvement in Rett syndrome through mutations in the MECP2 gene. It then discusses how alterations in DNA methylation levels and patterns are common in cancer and can lead to genomic instability. Finally, it examines the use of epigenetic therapies like DNA methyltransferase inhibitors and histone deacetylase inhibitors to treat cancer by reversing aberrant DNA methylation and histone modifications.
This document summarizes a study that investigated how mechanical stressing of integrin receptors affects tyrosine phosphorylation in osteoblastic cells. The key findings were:
1) Mechanical stressing of both the β1 and α2 integrin subunits induced enhanced tyrosine phosphorylation of proteins compared to integrin clustering alone.
2) Applying cyclic forces at 1 Hz was more effective at inducing tyrosine phosphorylation than continuous stress.
3) Mechanically stressed cells showed tyrosine-phosphorylated proteins becoming anchored to the cytoskeleton in a calcium-dependent manner.
4) Mechanical stressing of integrins also increased phosphorylation of MAP kinases, suggesting it can induce downstream signaling events.
KDM5 epigenetic modifiers as a focus for drug discoveryChristopher Wynder
A summary presentation of my scientific work.
My laboratory focused on an enzyme KDM5b (aka PLU-1, JARID1b) that was widely expressed during development and played a key role in progression of breast cancer through HER-2.
My lab focused on understanding the key biochemical activity of the enzyme through dissecting the proteomic and genomic interactors.
Our results were confirmed through the use of ES cells, adult stem cells and mouse models.
Much of this work remains unpublished, please contact me for more information and/or access to any reagents that I still have as part of this work.
crwynder@gmail.com
This document discusses a study examining the role of metallothionein-I/II (MT-I/II) in promoting axonal regeneration in the central nervous system after injury. The key findings are:
1) MT-I/II can overcome inhibition by myelin and myelin-associated glycoprotein (MAG) to promote neurite outgrowth from cortical, hippocampal and dorsal root ganglion neurons in vitro.
2) Intrathecal delivery of MT-I/II to dorsal root ganglion neurons promotes neurite outgrowth in the presence of MAG.
3) Mice deficient in MT-I/II show reduced neurite outgrowth on MAG and fail to regener
Temporal-Spatial Expressions of Spy1 in Rat Sciatic Nerve After CrushJiao Yang
1. The study examined the expression of the cell cycle protein Spy1 in a rat sciatic nerve crush injury model over time.
2. Spy1 expression was found to gradually increase after injury, peaking at day 3, due to increased expression in both axons and Schwann cells.
3. Spy1 expression correlated with Schwann cell proliferation after injury and Spy1 was found to localize in axons in the injured segment but did not co-localize with the growth protein GAP43.
This document summarizes recent developments in small molecule epigenetic drugs. It discusses four DNA methyltransferase (DNMT) inhibitors approved by the FDA, including Vidaza and Decitabine. It also discusses two histone deacetylase (HDAC) inhibitors approved, Vorinostat and Romidepsin. Other epigenetic targets discussed include Sirtuins, histone methyltransferases, and protein arginine methyltransferases. The document reviews the development stages of small molecules related to epigenetics and their role in disease development and progression. It provides examples of epigenetic targets disrupted in cancer and structures of common HDAC and other epigenetic inhibitors. In conclusion, it states that HDAC inhibitors
The document discusses various topics related to DNA methylation and its role in human pathology. It begins by describing the MeCP2 protein and its involvement in Rett syndrome through mutations in the MECP2 gene. It then discusses how alterations in DNA methylation levels and patterns are common in cancer and can lead to genomic instability. Finally, it examines the use of epigenetic therapies like DNA methyltransferase inhibitors and histone deacetylase inhibitors to treat cancer by reversing aberrant DNA methylation and histone modifications.
The document discusses various topics related to DNA methylation and its role in human pathology. It begins by describing the MeCP2 protein and its involvement in Rett syndrome through mutations in the MECP2 gene. It then discusses how alterations in DNA methylation levels and patterns are common in cancer and can lead to genomic instability. Finally, it examines the use of epigenetic therapies like DNA methyltransferase inhibitors and histone deacetylase inhibitors to treat cancer by reversing aberrant DNA methylation and histone modifications.
This study investigated the effects of lithium on the MEK-ERK signaling pathway in astrocytes and neurons. The key findings were:
1) In astrocytes, lithium decreased MEK and ERK phosphorylation in a time- and dose-dependent manner, inhibiting DNA synthesis and inducing cell cycle arrest.
2) In neurons, lithium enhanced MEK and ERK phosphorylation in a concentration-dependent way.
3) The opposing effects of lithium on the MEK-ERK pathway in astrocytes versus neurons suggest lithium may promote neural repair by inhibiting reactive gliosis while stimulating neurons.
Regulation of KDM5 by multiple cofactors regulates cancer and stem cellsChristopher Wynder
The document discusses regulation of histone modifications and neural differentiation. It notes that during the first two years, ASD brains "over-grow" leading to hyper-connectivity and often apoptosis, resulting in absence of neurons. ASD can also result from later synaptic activity changes. Many ASD genes are also cancer-related, and epigenetics is given as the reason for ASD. Recently, mutations in multiple epigenetic regulators have been found in ASD patients. Histone modifications, like those regulated by KDM5 proteins, are an example of epigenetic changes that can be significant and changeable. KDM5 proteins are regulated by a two-part system involving activation by TLE4 and gene-specific
Brian Covello: Diabetes Research Presentation Semester 2Brian Covello
This document summarizes previous research on the effects of 1,25-dihydroxyvitamin D3 and retinoic acid on PPARγ expression and insulin resistance in diabetes mellitus type 2. It was found that both metabolites inhibit PPARγ expression and adipocyte differentiation. However, past studies only tested the metabolites individually and on differentiated cells, not mixtures or on pre-adipocytes. The proposed research aims to test mixtures of the metabolites on pre-adipocytes and differentiated cells, as well as conduct transactivation studies to further understand how the metabolites modulate PPARγ and insulin resistance.
1) Researchers successfully constructed a fluorescent eukaryotic expression vector carrying the human telomerase reverse transcriptase (hTERT) gene and transfected it into human corpus cavernosum smooth muscle cells.
2) The hTERT-transfected cells showed significantly higher telomerase activity, mitotic index, and cell growth compared to non-transfected and control vector-transfected cells, while having lower apoptosis rates.
3) The hTERT-transfected smooth muscle cells did not exhibit any malignant phenotypes and remained normal diploid cells, indicating hTERT gene transfer reduced cell aging without causing tumorigenesis.
This study investigated the effects of pro-inflammatory cytokines TNFα and IFNγ and the hormone testosterone on expression of the chemokine receptors CX3CR1 and CCR2 on THP-1 monocytes. Flow cytometry analysis confirmed that TNFα and IFNγ increase cell surface expression of CX3CR1 and CCR2, while testosterone decreases expression of these receptors. Additionally, pre-treating cells with testosterone before cytokine exposure continued to decrease CX3CR1 and CCR2 expression levels compared to cytokine treatment alone. Future work will utilize controls to ensure the testosterone effects are receptor-mediated and not due to conversion to estrogen.
This summary provides an overview of a study that characterized the kinetics of nicotinamide phosphoribosyltransferase (Nampt), an enzyme involved in the NAD+ salvage pathway. The researchers developed a fluorescence-based assay to monitor Nampt activity and its inhibition by FK866. They determined the kinetic parameters Km, Kcat, and Kcat/Km for wild type Nampt and mutants, finding the Y188F mutant lacked activity. Preliminary data confirmed FK866 inhibition of Nampt in a dose-dependent manner, with an IC50 of 1.204 μM. Future work will further validate mutant kinetics and inhibition controls.
Final Activity Nampt Poster Summer 2012Katelyn Pina
This study aimed to characterize the kinetics of nicotinamide phosphoribosyltransferase (Nampt) and the effects of mutations on its activity. A fluorescence-based assay was optimized to monitor Nampt's reaction and generate Michaelis-Menten kinetics. Preliminary data showed wild-type Nampt could be inhibited by FK866 as expected. The Y188F mutant lacked activity, confirming the importance of that residue, while the Y188D mutant showed activity reduction. Further experiments are needed to fully analyze the kinetics of wild-type and mutant Nampt.
This document discusses mitochondrial mechanisms of brain injury and potential neuroprotective interventions. It summarizes that mitochondrial dysfunction, oxidative stress, and apoptosis are key mechanisms of brain injury. Various interventions are proposed to target these mechanisms, including reducing oxidative stress through Nrf2 activators like sulforaphane, protecting bioenergetics through alternative fuels or PTP inhibitors, and modulating apoptosis. In vitro and animal studies provide evidence that compounds like sulforaphane, acetyl-L-carnitine, and cyclosporin A may confer neuroprotection through these mitochondrial mechanisms.
Tetrahydrohyperforin (IDN5706), a derivative of the active molecule hyperforin in St. John's Wort, was examined for its ability to prevent cognitive deficits and synaptic impairment in an Alzheimer's disease mouse model. Five-month old APPswe/PSEN1DE9 mice were treated with IDN5706 for 10 weeks. IDN5706 improved memory, prevented decreases in synaptic proteins and LTP, and reduced amyloid-beta plaque burden, tau hyperphosphorylation, and astrogliosis. In cell cultures, IDN5706 decreased amyloid precursor protein processing leading to amyloid-beta peptide generation. The results suggest IDN5706 may be a potential therapeutic for treating Alzheimer's
GAPDH, a well-known glycolytic enzyme, mediatesPei-Ju Chin
This document proposes experiments to investigate how the glycolytic enzyme GAPDH (TDH3 in yeast) mediates apoptosis through epigenetic mechanisms. The first aim is to test if the protein interaction between SET and GAPDH regulates caspase-independent apoptosis by regulating granzyme A activity. The second aim is to determine if GAPDH-mediated expression of histone H2B, influenced by redox status, exerts apoptotic potential in cadmium-stressed yeast cells. Experiments include in vitro and in vivo assays of granzyme A activity and use of yeast mutants and complementation to assess the roles of TDH3, SET and H2B in apoptosis.
Primary Human Cell Systems Analysis of Drug MechanismsBioMAP® Systems
The document summarizes a presentation about using BioMAP human cell systems to analyze the mechanisms of drug compounds, including PPAR agonists. It describes how BioMAP uses primary human cells in disease-like conditions to generate quantitative readouts that can discriminate between clinical compounds. Profiling of PPAR agonists using BioMAP revealed both shared and unique anti-inflammatory, tissue remodeling, and prostaglandin pathway effects. Differential activities suggested priorities for therapeutic areas and potential side effects.
The researchers isolated and characterized the temperate mycobacteriophage Butters, which has one of the smallest known mycobacteriophage genomes at 41,491 bp. Using a technique called BRED, they deleted genes in the Butters genome, including the integrase gene gp37 and several orpham genes of unknown function. Deletion of the integrase gene resulted in mutant phages that formed larger, clearer plaques, suggesting a shift to a lytic life cycle. Deletion of the orpham genes gp30 and gp57 resulted in larger plaque sizes but did not prevent lysogeny, indicating these genes are not essential for the lysogenic cycle. Ongoing work includes further characterizing
El lunes y martes 20 y 21 de noviembre coordinamos un simposio internacional en la Fundación Ramón Areces, sobre los defectos del transporte de aminoácidos.
This study identified an ethylene-responsive element (ERE) involved in regulating transcription of the carnation glutathione-S-transferase 1 (GST1) gene during petal senescence. Through deletion analysis and transient expression assays of GST1-GUS gene fusions delivered to carnation petals via particle bombardment, the researchers identified a 197 bp region between -667 and -470 bp upstream of the GST1 transcription start site that is necessary for ethylene-responsive expression. Within this region, a 126 bp sequence between -596 and -470 bp conferred ethylene-regulated expression to a minimal CaMV 35S promoter. Nuclear protein extracts from carnation petals were found to specifically bind
The document discusses a study investigating the effects of food restriction on gene expression. It was previously found that 15 genes were upregulated in the brain during food restriction, suggesting they are part of an ancient stress response pathway. The current study aims to test if these genes are also induced in other tissue types under food restriction. Mice were either food restricted or not for 5 days, then gene expression was analyzed using qPCR in various tissues including the kidney. It was found that Angptl4, Mertk, Arrdc2 and Cdkn1a were significantly upregulated in the kidney of food restricted mice compared to controls, providing further evidence they are part of a general stress response pathway activated by food restriction across multiple
The researchers identified 120 effector gene candidates from the wheat stem rust fungus Puccinia graminis f. sp. tritici (Pgt) using bioinformatics. They tested 65 of these candidates in rice using transient expression assays and identified 6 that were potentially recognized by rice resistance genes. Two Pgt effector genes are being further characterized as potential suppressors of plant cell death. The long term goals are to isolate Pgt effectors recognized by rice resistance genes, isolate the corresponding rice resistance genes, and transfer the rice resistance genes into wheat to develop rust resistance.
1) MKP1/CL100 expression is higher in NSCLC tumor cells compared to normal bronchial epithelium, with staining mainly in tumor cell nuclei.
2) Cisplatin treatment of NSCLC cells activates the JNK and p38 signaling pathways.
3) Inhibiting MKP1 expression in NSCLC cells using siRNA increases their sensitivity to cisplatin treatment over 10-fold, both in cells and in mouse tumor models. MKP1 inhibition contributes to slower tumor growth and increased cisplatin-induced cell death in NSCLC.
Este documento resume conceptos clave sobre la fisiopatología molecular del cáncer. Explica que el cáncer se debe a alteraciones en los genes que regulan el crecimiento celular, como proto-oncogenes que se convierten en oncogenes al mutar o amplificarse. También describe cómo los carcinógenos pueden dañar el ADN e inactivar genes supresores tumorales, llevando a la carcinogénesis. Finalmente, presenta datos sobre la activación de oncogenes específicos en diferentes tumores inducidos por distintos agentes cancerígenos
Protooncogenes, oncogenes y genes supresores de tumorAriel Aranda
Este documento habla sobre los protooncogenes, oncogenes y genes supresores de tumor y su relación con el cáncer desde una perspectiva evolutiva. Explica que los protooncogenes se convierten en oncogenes al acumular mutaciones y describen los mecanismos por los cuales esto ocurre. También describe los genes supresores de tumor y cómo necesitan mutaciones en ambos alelos para causar cáncer. Finalmente, discute si el cáncer puede evolucionar entre generaciones, concluyendo que no es posible a menos que las mutaciones ocurran en cél
Cancer is characterized by uncontrolled cell growth and spread. At the cellular level, cancer cells proliferate excessively, grow in an uncoordinated manner, and infiltrate surrounding tissues. This uncontrolled growth is caused by genetic disorders that affect genes regulating cell growth. Cancer cells lose control over growth and multiplication and do not self-destruct like normal cells. They crowd out healthy cells. Genetic changes can activate oncogenes or inactivate tumor suppressor genes, disrupting the normal balance between cell proliferation and cell death. A variety of genetic, environmental, and viral factors can cause these genetic changes and contribute to cancer development.
Este documento presenta información sobre la ontogenia (desarrollo embrionario) y la mitosis. Explica que el desarrollo embrionario puede proporcionar pistas sobre la historia evolutiva de los organismos y describe las fases de la mitosis, incluida la interfase, profase, metafase, anafase y telofase. También incluye imágenes microscópicas que ilustran las diferentes etapas de la mitosis.
The document discusses various topics related to DNA methylation and its role in human pathology. It begins by describing the MeCP2 protein and its involvement in Rett syndrome through mutations in the MECP2 gene. It then discusses how alterations in DNA methylation levels and patterns are common in cancer and can lead to genomic instability. Finally, it examines the use of epigenetic therapies like DNA methyltransferase inhibitors and histone deacetylase inhibitors to treat cancer by reversing aberrant DNA methylation and histone modifications.
This study investigated the effects of lithium on the MEK-ERK signaling pathway in astrocytes and neurons. The key findings were:
1) In astrocytes, lithium decreased MEK and ERK phosphorylation in a time- and dose-dependent manner, inhibiting DNA synthesis and inducing cell cycle arrest.
2) In neurons, lithium enhanced MEK and ERK phosphorylation in a concentration-dependent way.
3) The opposing effects of lithium on the MEK-ERK pathway in astrocytes versus neurons suggest lithium may promote neural repair by inhibiting reactive gliosis while stimulating neurons.
Regulation of KDM5 by multiple cofactors regulates cancer and stem cellsChristopher Wynder
The document discusses regulation of histone modifications and neural differentiation. It notes that during the first two years, ASD brains "over-grow" leading to hyper-connectivity and often apoptosis, resulting in absence of neurons. ASD can also result from later synaptic activity changes. Many ASD genes are also cancer-related, and epigenetics is given as the reason for ASD. Recently, mutations in multiple epigenetic regulators have been found in ASD patients. Histone modifications, like those regulated by KDM5 proteins, are an example of epigenetic changes that can be significant and changeable. KDM5 proteins are regulated by a two-part system involving activation by TLE4 and gene-specific
Brian Covello: Diabetes Research Presentation Semester 2Brian Covello
This document summarizes previous research on the effects of 1,25-dihydroxyvitamin D3 and retinoic acid on PPARγ expression and insulin resistance in diabetes mellitus type 2. It was found that both metabolites inhibit PPARγ expression and adipocyte differentiation. However, past studies only tested the metabolites individually and on differentiated cells, not mixtures or on pre-adipocytes. The proposed research aims to test mixtures of the metabolites on pre-adipocytes and differentiated cells, as well as conduct transactivation studies to further understand how the metabolites modulate PPARγ and insulin resistance.
1) Researchers successfully constructed a fluorescent eukaryotic expression vector carrying the human telomerase reverse transcriptase (hTERT) gene and transfected it into human corpus cavernosum smooth muscle cells.
2) The hTERT-transfected cells showed significantly higher telomerase activity, mitotic index, and cell growth compared to non-transfected and control vector-transfected cells, while having lower apoptosis rates.
3) The hTERT-transfected smooth muscle cells did not exhibit any malignant phenotypes and remained normal diploid cells, indicating hTERT gene transfer reduced cell aging without causing tumorigenesis.
This study investigated the effects of pro-inflammatory cytokines TNFα and IFNγ and the hormone testosterone on expression of the chemokine receptors CX3CR1 and CCR2 on THP-1 monocytes. Flow cytometry analysis confirmed that TNFα and IFNγ increase cell surface expression of CX3CR1 and CCR2, while testosterone decreases expression of these receptors. Additionally, pre-treating cells with testosterone before cytokine exposure continued to decrease CX3CR1 and CCR2 expression levels compared to cytokine treatment alone. Future work will utilize controls to ensure the testosterone effects are receptor-mediated and not due to conversion to estrogen.
This summary provides an overview of a study that characterized the kinetics of nicotinamide phosphoribosyltransferase (Nampt), an enzyme involved in the NAD+ salvage pathway. The researchers developed a fluorescence-based assay to monitor Nampt activity and its inhibition by FK866. They determined the kinetic parameters Km, Kcat, and Kcat/Km for wild type Nampt and mutants, finding the Y188F mutant lacked activity. Preliminary data confirmed FK866 inhibition of Nampt in a dose-dependent manner, with an IC50 of 1.204 μM. Future work will further validate mutant kinetics and inhibition controls.
Final Activity Nampt Poster Summer 2012Katelyn Pina
This study aimed to characterize the kinetics of nicotinamide phosphoribosyltransferase (Nampt) and the effects of mutations on its activity. A fluorescence-based assay was optimized to monitor Nampt's reaction and generate Michaelis-Menten kinetics. Preliminary data showed wild-type Nampt could be inhibited by FK866 as expected. The Y188F mutant lacked activity, confirming the importance of that residue, while the Y188D mutant showed activity reduction. Further experiments are needed to fully analyze the kinetics of wild-type and mutant Nampt.
This document discusses mitochondrial mechanisms of brain injury and potential neuroprotective interventions. It summarizes that mitochondrial dysfunction, oxidative stress, and apoptosis are key mechanisms of brain injury. Various interventions are proposed to target these mechanisms, including reducing oxidative stress through Nrf2 activators like sulforaphane, protecting bioenergetics through alternative fuels or PTP inhibitors, and modulating apoptosis. In vitro and animal studies provide evidence that compounds like sulforaphane, acetyl-L-carnitine, and cyclosporin A may confer neuroprotection through these mitochondrial mechanisms.
Tetrahydrohyperforin (IDN5706), a derivative of the active molecule hyperforin in St. John's Wort, was examined for its ability to prevent cognitive deficits and synaptic impairment in an Alzheimer's disease mouse model. Five-month old APPswe/PSEN1DE9 mice were treated with IDN5706 for 10 weeks. IDN5706 improved memory, prevented decreases in synaptic proteins and LTP, and reduced amyloid-beta plaque burden, tau hyperphosphorylation, and astrogliosis. In cell cultures, IDN5706 decreased amyloid precursor protein processing leading to amyloid-beta peptide generation. The results suggest IDN5706 may be a potential therapeutic for treating Alzheimer's
GAPDH, a well-known glycolytic enzyme, mediatesPei-Ju Chin
This document proposes experiments to investigate how the glycolytic enzyme GAPDH (TDH3 in yeast) mediates apoptosis through epigenetic mechanisms. The first aim is to test if the protein interaction between SET and GAPDH regulates caspase-independent apoptosis by regulating granzyme A activity. The second aim is to determine if GAPDH-mediated expression of histone H2B, influenced by redox status, exerts apoptotic potential in cadmium-stressed yeast cells. Experiments include in vitro and in vivo assays of granzyme A activity and use of yeast mutants and complementation to assess the roles of TDH3, SET and H2B in apoptosis.
Primary Human Cell Systems Analysis of Drug MechanismsBioMAP® Systems
The document summarizes a presentation about using BioMAP human cell systems to analyze the mechanisms of drug compounds, including PPAR agonists. It describes how BioMAP uses primary human cells in disease-like conditions to generate quantitative readouts that can discriminate between clinical compounds. Profiling of PPAR agonists using BioMAP revealed both shared and unique anti-inflammatory, tissue remodeling, and prostaglandin pathway effects. Differential activities suggested priorities for therapeutic areas and potential side effects.
The researchers isolated and characterized the temperate mycobacteriophage Butters, which has one of the smallest known mycobacteriophage genomes at 41,491 bp. Using a technique called BRED, they deleted genes in the Butters genome, including the integrase gene gp37 and several orpham genes of unknown function. Deletion of the integrase gene resulted in mutant phages that formed larger, clearer plaques, suggesting a shift to a lytic life cycle. Deletion of the orpham genes gp30 and gp57 resulted in larger plaque sizes but did not prevent lysogeny, indicating these genes are not essential for the lysogenic cycle. Ongoing work includes further characterizing
El lunes y martes 20 y 21 de noviembre coordinamos un simposio internacional en la Fundación Ramón Areces, sobre los defectos del transporte de aminoácidos.
This study identified an ethylene-responsive element (ERE) involved in regulating transcription of the carnation glutathione-S-transferase 1 (GST1) gene during petal senescence. Through deletion analysis and transient expression assays of GST1-GUS gene fusions delivered to carnation petals via particle bombardment, the researchers identified a 197 bp region between -667 and -470 bp upstream of the GST1 transcription start site that is necessary for ethylene-responsive expression. Within this region, a 126 bp sequence between -596 and -470 bp conferred ethylene-regulated expression to a minimal CaMV 35S promoter. Nuclear protein extracts from carnation petals were found to specifically bind
The document discusses a study investigating the effects of food restriction on gene expression. It was previously found that 15 genes were upregulated in the brain during food restriction, suggesting they are part of an ancient stress response pathway. The current study aims to test if these genes are also induced in other tissue types under food restriction. Mice were either food restricted or not for 5 days, then gene expression was analyzed using qPCR in various tissues including the kidney. It was found that Angptl4, Mertk, Arrdc2 and Cdkn1a were significantly upregulated in the kidney of food restricted mice compared to controls, providing further evidence they are part of a general stress response pathway activated by food restriction across multiple
The researchers identified 120 effector gene candidates from the wheat stem rust fungus Puccinia graminis f. sp. tritici (Pgt) using bioinformatics. They tested 65 of these candidates in rice using transient expression assays and identified 6 that were potentially recognized by rice resistance genes. Two Pgt effector genes are being further characterized as potential suppressors of plant cell death. The long term goals are to isolate Pgt effectors recognized by rice resistance genes, isolate the corresponding rice resistance genes, and transfer the rice resistance genes into wheat to develop rust resistance.
1) MKP1/CL100 expression is higher in NSCLC tumor cells compared to normal bronchial epithelium, with staining mainly in tumor cell nuclei.
2) Cisplatin treatment of NSCLC cells activates the JNK and p38 signaling pathways.
3) Inhibiting MKP1 expression in NSCLC cells using siRNA increases their sensitivity to cisplatin treatment over 10-fold, both in cells and in mouse tumor models. MKP1 inhibition contributes to slower tumor growth and increased cisplatin-induced cell death in NSCLC.
Este documento resume conceptos clave sobre la fisiopatología molecular del cáncer. Explica que el cáncer se debe a alteraciones en los genes que regulan el crecimiento celular, como proto-oncogenes que se convierten en oncogenes al mutar o amplificarse. También describe cómo los carcinógenos pueden dañar el ADN e inactivar genes supresores tumorales, llevando a la carcinogénesis. Finalmente, presenta datos sobre la activación de oncogenes específicos en diferentes tumores inducidos por distintos agentes cancerígenos
Protooncogenes, oncogenes y genes supresores de tumorAriel Aranda
Este documento habla sobre los protooncogenes, oncogenes y genes supresores de tumor y su relación con el cáncer desde una perspectiva evolutiva. Explica que los protooncogenes se convierten en oncogenes al acumular mutaciones y describen los mecanismos por los cuales esto ocurre. También describe los genes supresores de tumor y cómo necesitan mutaciones en ambos alelos para causar cáncer. Finalmente, discute si el cáncer puede evolucionar entre generaciones, concluyendo que no es posible a menos que las mutaciones ocurran en cél
Cancer is characterized by uncontrolled cell growth and spread. At the cellular level, cancer cells proliferate excessively, grow in an uncoordinated manner, and infiltrate surrounding tissues. This uncontrolled growth is caused by genetic disorders that affect genes regulating cell growth. Cancer cells lose control over growth and multiplication and do not self-destruct like normal cells. They crowd out healthy cells. Genetic changes can activate oncogenes or inactivate tumor suppressor genes, disrupting the normal balance between cell proliferation and cell death. A variety of genetic, environmental, and viral factors can cause these genetic changes and contribute to cancer development.
Este documento presenta información sobre la ontogenia (desarrollo embrionario) y la mitosis. Explica que el desarrollo embrionario puede proporcionar pistas sobre la historia evolutiva de los organismos y describe las fases de la mitosis, incluida la interfase, profase, metafase, anafase y telofase. También incluye imágenes microscópicas que ilustran las diferentes etapas de la mitosis.
El documento describe el manejo del paciente con cáncer, incluyendo la evaluación inicial, estadificación, factores pronósticos, planes de tratamiento y manejo de apoyo. Se evalúan factores del paciente, tumor y tratamiento para decidir el enfoque, ya sea curativo o paliativo. El seguimiento incluye detección de recurrencia y complicaciones a largo plazo.
The document discusses how normal cells are transformed into cancer cells through multiple genetic changes over many years. It describes several key changes that occur during this process, including immortalization where cells can divide indefinitely, transformation where cells grow independently of external signals, and metastasis where cancer cells invade other tissues. Several types of genetic alterations are also discussed that can activate oncogenes or inactivate tumor suppressor genes, such as mutations, amplification, insertion, or translocation events. This leads to deregulated cell growth and proliferation by disrupting normal cell signaling pathways.
Cancer is caused by mutations in genes that regulate cell growth and proliferation. These mutations can activate proto-oncogenes into oncogenes or inactivate tumor suppressor genes. Oncogenes promote cell growth while tumor suppressor genes normally inhibit cell proliferation. Common mechanisms of proto-oncogene activation include chromosomal translocations, gene amplifications, and point mutations. Disruptions to cell cycle checkpoints, apoptosis, telomere maintenance and DNA repair pathways can also contribute to cancer development by allowing abnormal cell growth and survival.
O documento discute a biologia do câncer, explicando que é um distúrbio clonal que surge de uma célula com perturbações na regulação da proliferação. Detalha as seis características das células cancerosas, como a auto-suficiência em fatores de crescimento, e discute os genes envolvidos, como oncogenes e genes supressores de tumor. Também explica as etapas da carcinogênese, incluindo a insensibilidade aos inibidores de crescimento e a evasão à apoptose
O documento discute a abordagem inicial de pacientes com câncer, incluindo avaliação multidisciplinar, diagnóstico, planejamento de tratamento e objetivos do tratamento como cura, sobrevida ou alívio de sintomas.
O documento discute os antígenos tumorais, a resposta imune contra tumores e limitações da imunoterapia. Em particular, descreve que antígenos tumorais podem ser induzidos por mutações, vírus ou fatores de desenvolvimento e que a resposta imune é limitada pela capacidade dos tumores escaparem da detecção.
Soporte psicológico del paciente oncológicoCris Romero
Este documento discute varios temas relacionados con el cáncer y su tratamiento desde la perspectiva médica y del paciente. Enfatiza la importancia de que los médicos mantengan una actitud optimista y brinden apoyo emocional a los pacientes, así como de tomar decisiones sobre el tratamiento de forma colaborativa. También destaca la necesidad de educar a las personas sobre estilos de vida saludables para prevenir el cáncer y de apoyar la autoestima y bienestar psicosocial de los pacientes.
Esta es una presentación muy completa en la que se explican los mecanismos moleculares del cáncer. Contiene vínculos a vídeo y páginas electrónicas. Además podrás descargar el video para introducirlo en tu iPod. Más materiales en www.profesorjano.org
1) El documento describe las bases moleculares del cáncer y la conversión de protooncogenes en oncogenes. 2) Un protooncogen es un gen normal que regula el crecimiento celular, mientras que un oncogén es una versión mutada del protooncogen que causa proliferación celular descontrolada. 3) Los oncogenes se activan por mutaciones en el ADN causadas por factores como radiación, químicos o virus, o por alteraciones epigenéticas como la metilación del ADN.
This document discusses molecular perspectives on cancer development. It describes how cancer cells differ from normal cells in their loss of growth regulation and increased proliferation. The key characteristics of cancer include clonality, autonomy, anaplasia, metastasis. Cancer development is driven by mutations in oncogenes, tumor suppressor genes, and mutator genes. Various carcinogens like chemicals, radiation, and viruses can cause these genetic mutations and ultimately lead to cancer. The major pathways of malignancy include uncontrolled proliferation, defects in cell cycle regulation, impaired DNA repair, immortalization, inhibited apoptosis, angiogenesis, and metastasis.
Este documento describe las bases moleculares del cáncer, incluyendo las mutaciones en oncogenes y genes supresores de tumores que conducen a la neoplasia. Las células cancerosas proliferan de forma anormal debido a mutaciones que activan oncogenes o inactivan genes supresores de tumores, desregulando el crecimiento celular. Las translocaciones cromosómicas pueden activar oncogenes mientras que la pérdida de heterocigocidad inactiva los genes supresores de tumores.
O capítulo descreve o câncer de cabeça e pescoço, incluindo sua incidência, fatores de risco, sintomas comuns e abordagem diagnóstica e terapêutica. Os principais fatores de risco são o tabagismo e o etilismo. Os sintomas variam de acordo com a localização do tumor e incluem dor de garganta, rouquidão e linfadenopatia cervical. O diagnóstico é realizado por meio de exames físicos e biópsia da lesão. O tratamento inclui cirurgia,
Este documento trata sobre oncogenes, que son genes que cuando se alteran pueden causar cáncer. Explica qué son los protooncogenes y oncogenes retrovirales, y cómo afectan la apoptosis. También describe cómo mutaciones en oncogenes como RAS pueden llevar al desarrollo de tumores, e identifica varios oncogenes como MYC y EGFR que juegan un papel en la iniciación y progresión del cáncer. Finalmente, discute el potencial de los oncogenes como puntos de intervención terapéutica y el papel de los
1) The study examines the role of tissue plasminogen activator (tPA) and plasmin in promoting axonal regrowth after spinal cord injury (SCI) via degradation of chondroitin sulfate proteoglycans (CSPGs).
2) It finds that tPA and plasmin are upregulated after SCI and can degrade CSPG core proteins. Mice lacking tPA show attenuated neurite outgrowth and recovery after SCI, even with chondroitinase ABC (ChABC) treatment to degrade CSPG sugar chains.
3) Coadministration of ChABC and plasmin enhanced recovery in tPA-deficient mice and further supported recovery in wild-type mice with S
1) STAT3 signaling plays a critical role in regulating astrocyte reactivity and scar formation after spinal cord injury.
2) Mice with conditional deletion of STAT3 from astrocytes showed attenuated upregulation of GFAP, failed astrocyte hypertrophy, and disrupted scar formation after injury.
3) These changes were associated with increased spread of inflammation and increased lesion size, with partially attenuated motor recovery over 28 days following injury.
The document examines the effects of the TACE inhibitor BMS-561392 on APP processing both in vitro and in vivo. In cell cultures expressing APP, BMS-561392 reduced secretion of sAPPα without increasing Aβ production. Conversely, a BACE inhibitor decreased sAPPβ and Aβ without affecting sAPPα. In vivo infusion of BMS-561392 into mouse brains decreased sAPPα levels but did not significantly change steady-state Aβ levels. The findings suggest that under normal conditions, BACE and TACE do not compete for APP as a substrate, though they share localization in the trans-Golgi network. Inhibition of TACE may therefore reduce TNFα levels in
Direct conversion of neurons to fibroblastssyed shafiq
The document summarizes a research article that was published in Nature in 2010. The study found that fibroblasts could be directly converted into functional neurons by infecting the cells with viruses containing five transcription factor genes (Ascl1, Brn2, Myt1l, Zic1, and Olig2). The resulting induced neuronal (iN) cells displayed neuronal morphology, membrane properties, and ability to form functional synapses similar to primary neurons. Further experiments showed that Ascl1 alone or Ascl1 combined with Brn2 and Myt1l were able to generate iN cells, demonstrating the key factors required for direct neuronal conversion.
Edgardo J. Arroyo is an Associate Research Scientist at Yale University School of Medicine who has extensive experience researching various aspects of myelin formation, degradation, and regeneration in the central and peripheral nervous systems. His research has focused on elucidating the cellular mechanisms and microanatomy of neuron-glial interactions using techniques such as immunohistochemistry, confocal microscopy, and biochemistry. He has studied topics such as the effects of spinal cord injury, stem cell transplantation, sodium channel expression after nerve damage, and how demyelination affects the molecular organization of nodes of Ranvier.
Na f activates map ks and induces apoptosis in odontoblast-likeGanesh Murthi
The study examined the effects of sodium fluoride (NaF) on odontoblast-like MDPC-23 cells. The researchers found that NaF exposure induced apoptosis in a dose-dependent manner through several markers. NaF activated the mitogen-activated protein kinases (MAPKs) JNK and p38, and induced two peaks in ERK phosphorylation. Inhibition of JNK suppressed NaF-induced apoptosis, while inhibition of p38 and ERK had lesser effects, suggesting NaF-induced apoptosis depends primarily on JNK signaling.
Seminar-Spring 2010-Role of Wnt signaling in Alzheimer's disease pathogenesisNisha Rizvi
1. Wnt ligands are involved in pre- and postsynaptic protein clustering and assembly at synapses and form functional new synapses.
2. Activation of Wnt signaling protects against Aβ toxicity in Alzheimer's disease by increasing neuronal survival, decreasing apoptosis, and stabilizing β-catenin levels. Inhibition of Wnt signaling can cause neuronal damage.
3. Wnt signaling interacts and forms a crosstalk with other pathways important in Alzheimer's like M1 muscarinic acetylcholine receptor activation and PPARγ activation, which may provide neuroprotective effects against Aβ toxicity.
A stop codon mutation in scn9a causes lack of pain sensationhad89
Sensation:
It is the rapid response to represent stimuli from the environment.
Essential for survival because these environmental factors may cause physical damage
There are numerous receptors, ion channel and other proteins involved in perception and transmission of painful stimuli.
Insights into the epigenetic mechanisms involving histone lysineashutosh mahale
1. The study investigated the role of histone lysine methylation and demethylation in an internal carotid artery occlusion (ICAO) mouse model of mild to moderate stroke.
2. The ICAO model resulted in neuronal damage to the striatum. Epigenetic markers like H3K9me2 were decreased after ischemia but recovered with time.
3. Inhibiting jmjD2 demethylases after ischemia prevented the decrease in H3K9me2, reduced neuronal cell death, and improved neurological outcomes, suggesting epigenetic mechanisms are implicated in stroke pathology and recovery.
This document describes research investigating the potential of human endometrial stem cells (EnSCs) to differentiate into neural cells. EnSCs were isolated from endometrial biopsies and characterized by flow cytometry, showing expression of stem cell markers and lack of hematopoietic/endothelial markers. The EnSCs were induced to differentiate into neural cells using growth factors like bFGF, PDGF, and EGF. After induction, the cells expressed neural markers like MAP2, β3-tubulin, and NF-L at the mRNA and protein levels based on RT-PCR and immunocytochemistry. The results demonstrate that EnSCs can respond to signaling molecules and differentiate into neuronal-like cells, suggesting their potential
Targeted RNA Sequencing, Urban Metagenomics, and Astronaut GenomicsQIAGEN
This document discusses targeted RNA sequencing and metagenomics projects including:
1. Using targeted RNA panels to profile gene expression in acute lymphoblastic leukemia patients to identify chemo-resistant clones hiding at low frequencies.
2. Conducting the first city-scale metagenomic profile of the New York City subway system, finding many bacterial species including those associated with skin.
3. Ongoing plans to conduct metropolitan-scale metagenomic profiling in several major cities around the world to better understand urban microbiomes and human-microbe interactions.
1) Human growth hormone (HGH) treatment increased survival motor neuron (SMN) protein levels in human neuronal cells in a dose-dependent manner by activating the STAT5 signaling pathway.
2) Systemic administration of HGH to spinal muscular atrophy (SMA) mouse models induced higher levels of SMN protein in the brain and spinal cord.
3) HGH treatment improved disease phenotypes and increased survival in two severe SMA mouse models, confirming that activating the STAT5 pathway may be a promising therapeutic strategy for SMA.
caron.ppt educate the patient on the usesomar97227
This document summarizes Marc Caron's research on the neuronal plasticity associated with drugs of abuse. Some key points:
- Caron used mouse models and genetic approaches to study addiction at the molecular level. He identified behaviors like sensitization and withdrawal that model aspects of human addiction.
- Microarray analysis of genetically sensitized mice found changes in genes like PSD-95, involved in synaptic plasticity. Knockout of PSD-95 enhanced responses to drugs, suggesting it plays a role in addiction.
- Further work showed that cocaine reduces PSD-95 levels in the striatum, enhancing long-term potentiation there. This may underlie the plasticity induced by drugs of abuse.
WIP is a negative regulator of neuronal maturation and synaptic activity. Mice lacking WIP (WIP-/-) have enlarged neuronal somas and overgrown neuritic and dendritic branches, especially during early development. WIP-/- neurons also have increased amplitude and frequency of miniature excitatory postsynaptic currents, indicating more mature synapses than in wild-type neurons. This reveals WIP as a previously unknown regulator of neuronal maturation and synaptic activity.
1) Mice lacking the inhibitory synapse cell adhesion molecule neuroligin 2 (NL2) were found to exhibit increased anxiety-like behavior.
2) While these NL2-deficient mice appeared to have a decrease in the density of inhibitory synaptic puncta, electron microscopy revealed no actual change in inhibitory synapse numbers.
3) This suggests that NL2 deletion impairs the function of inhibitory synapses without decreasing their numbers, and this decrease in inhibitory synaptic function correlates with increased anxiety in the mice.
Austin Journal of Neurological Disorders & Epilepsy is an open access journal, publishes manuscripts related to the aspects of the nervous system and brain. Austin Journal of Neurological Disorders & Epilepsy would cover ground braking studies on clinical, translational, molecular, cellular, and systemic aspects of neurology, neurophysiology, and pharmacological, neurochemistry including causes, diagnosis and treatment of the diseases of the central nervous system.
The editors welcome original research, review, case reports, clinical images, rapid communication, perspectives, editorial.
The document discusses methylation processes and their role in human pathogenesis. It first describes how the MeCP2 protein functions in gene silencing through methyl-DNA binding and transcription repression, but that its role is more complex as a regulator rather than strict silencer of transcription. It also discusses how MeCP2 mutations cause Rett syndrome and interactions with other proteins. The role of DNA methylation in cancer is then covered, including global hypomethylation in cancer and hypermethylation of tumor suppressor genes. Finally, the potential of epigenetic therapies targeting DNA methyltransferases and histone deacetylases for cancer treatment is presented.
This document discusses the role of the guanine nucleotide exchange factor C3G in neuronal differentiation. It finds that C3G protein levels increase when human neuroblastoma cells are induced to differentiate through serum starvation or treatment with forskolin or nerve growth factor. Overexpression of C3G stimulates neurite growth and increases responsiveness to differentiation signals, in a process dependent on C3G's catalytic domain and the functions of Rap1 and Cdc42. Knockdown of C3G inhibits forskolin- and nerve growth factor-induced differentiation and enhances cell death from serum starvation. C3G phosphorylation and localization to the Golgi are increased by forskolin and nerve growth factor treatment, and C3G
UiPath Test Automation using UiPath Test Suite series, part 5DianaGray10
Welcome to UiPath Test Automation using UiPath Test Suite series part 5. In this session, we will cover CI/CD with devops.
Topics covered:
CI/CD with in UiPath
End-to-end overview of CI/CD pipeline with Azure devops
Speaker:
Lyndsey Byblow, Test Suite Sales Engineer @ UiPath, Inc.
Unlock the Future of Search with MongoDB Atlas_ Vector Search Unleashed.pdfMalak Abu Hammad
Discover how MongoDB Atlas and vector search technology can revolutionize your application's search capabilities. This comprehensive presentation covers:
* What is Vector Search?
* Importance and benefits of vector search
* Practical use cases across various industries
* Step-by-step implementation guide
* Live demos with code snippets
* Enhancing LLM capabilities with vector search
* Best practices and optimization strategies
Perfect for developers, AI enthusiasts, and tech leaders. Learn how to leverage MongoDB Atlas to deliver highly relevant, context-aware search results, transforming your data retrieval process. Stay ahead in tech innovation and maximize the potential of your applications.
#MongoDB #VectorSearch #AI #SemanticSearch #TechInnovation #DataScience #LLM #MachineLearning #SearchTechnology
Sudheer Mechineni, Head of Application Frameworks, Standard Chartered Bank
Discover how Standard Chartered Bank harnessed the power of Neo4j to transform complex data access challenges into a dynamic, scalable graph database solution. This keynote will cover their journey from initial adoption to deploying a fully automated, enterprise-grade causal cluster, highlighting key strategies for modelling organisational changes and ensuring robust disaster recovery. Learn how these innovations have not only enhanced Standard Chartered Bank’s data infrastructure but also positioned them as pioneers in the banking sector’s adoption of graph technology.
AI 101: An Introduction to the Basics and Impact of Artificial IntelligenceIndexBug
Imagine a world where machines not only perform tasks but also learn, adapt, and make decisions. This is the promise of Artificial Intelligence (AI), a technology that's not just enhancing our lives but revolutionizing entire industries.
HCL Notes und Domino Lizenzkostenreduzierung in der Welt von DLAUpanagenda
Webinar Recording: https://www.panagenda.com/webinars/hcl-notes-und-domino-lizenzkostenreduzierung-in-der-welt-von-dlau/
DLAU und die Lizenzen nach dem CCB- und CCX-Modell sind für viele in der HCL-Community seit letztem Jahr ein heißes Thema. Als Notes- oder Domino-Kunde haben Sie vielleicht mit unerwartet hohen Benutzerzahlen und Lizenzgebühren zu kämpfen. Sie fragen sich vielleicht, wie diese neue Art der Lizenzierung funktioniert und welchen Nutzen sie Ihnen bringt. Vor allem wollen Sie sicherlich Ihr Budget einhalten und Kosten sparen, wo immer möglich. Das verstehen wir und wir möchten Ihnen dabei helfen!
Wir erklären Ihnen, wie Sie häufige Konfigurationsprobleme lösen können, die dazu führen können, dass mehr Benutzer gezählt werden als nötig, und wie Sie überflüssige oder ungenutzte Konten identifizieren und entfernen können, um Geld zu sparen. Es gibt auch einige Ansätze, die zu unnötigen Ausgaben führen können, z. B. wenn ein Personendokument anstelle eines Mail-Ins für geteilte Mailboxen verwendet wird. Wir zeigen Ihnen solche Fälle und deren Lösungen. Und natürlich erklären wir Ihnen das neue Lizenzmodell.
Nehmen Sie an diesem Webinar teil, bei dem HCL-Ambassador Marc Thomas und Gastredner Franz Walder Ihnen diese neue Welt näherbringen. Es vermittelt Ihnen die Tools und das Know-how, um den Überblick zu bewahren. Sie werden in der Lage sein, Ihre Kosten durch eine optimierte Domino-Konfiguration zu reduzieren und auch in Zukunft gering zu halten.
Diese Themen werden behandelt
- Reduzierung der Lizenzkosten durch Auffinden und Beheben von Fehlkonfigurationen und überflüssigen Konten
- Wie funktionieren CCB- und CCX-Lizenzen wirklich?
- Verstehen des DLAU-Tools und wie man es am besten nutzt
- Tipps für häufige Problembereiche, wie z. B. Team-Postfächer, Funktions-/Testbenutzer usw.
- Praxisbeispiele und Best Practices zum sofortigen Umsetzen
Cosa hanno in comune un mattoncino Lego e la backdoor XZ?Speck&Tech
ABSTRACT: A prima vista, un mattoncino Lego e la backdoor XZ potrebbero avere in comune il fatto di essere entrambi blocchi di costruzione, o dipendenze di progetti creativi e software. La realtà è che un mattoncino Lego e il caso della backdoor XZ hanno molto di più di tutto ciò in comune.
Partecipate alla presentazione per immergervi in una storia di interoperabilità, standard e formati aperti, per poi discutere del ruolo importante che i contributori hanno in una comunità open source sostenibile.
BIO: Sostenitrice del software libero e dei formati standard e aperti. È stata un membro attivo dei progetti Fedora e openSUSE e ha co-fondato l'Associazione LibreItalia dove è stata coinvolta in diversi eventi, migrazioni e formazione relativi a LibreOffice. In precedenza ha lavorato a migrazioni e corsi di formazione su LibreOffice per diverse amministrazioni pubbliche e privati. Da gennaio 2020 lavora in SUSE come Software Release Engineer per Uyuni e SUSE Manager e quando non segue la sua passione per i computer e per Geeko coltiva la sua curiosità per l'astronomia (da cui deriva il suo nickname deneb_alpha).
Communications Mining Series - Zero to Hero - Session 1DianaGray10
This session provides introduction to UiPath Communication Mining, importance and platform overview. You will acquire a good understand of the phases in Communication Mining as we go over the platform with you. Topics covered:
• Communication Mining Overview
• Why is it important?
• How can it help today’s business and the benefits
• Phases in Communication Mining
• Demo on Platform overview
• Q/A
Let's Integrate MuleSoft RPA, COMPOSER, APM with AWS IDP along with Slackshyamraj55
Discover the seamless integration of RPA (Robotic Process Automation), COMPOSER, and APM with AWS IDP enhanced with Slack notifications. Explore how these technologies converge to streamline workflows, optimize performance, and ensure secure access, all while leveraging the power of AWS IDP and real-time communication via Slack notifications.
How to Get CNIC Information System with Paksim Ga.pptxdanishmna97
Pakdata Cf is a groundbreaking system designed to streamline and facilitate access to CNIC information. This innovative platform leverages advanced technology to provide users with efficient and secure access to their CNIC details.
GraphSummit Singapore | The Future of Agility: Supercharging Digital Transfor...Neo4j
Leonard Jayamohan, Partner & Generative AI Lead, Deloitte
This keynote will reveal how Deloitte leverages Neo4j’s graph power for groundbreaking digital twin solutions, achieving a staggering 100x performance boost. Discover the essential role knowledge graphs play in successful generative AI implementations. Plus, get an exclusive look at an innovative Neo4j + Generative AI solution Deloitte is developing in-house.
Full-RAG: A modern architecture for hyper-personalizationZilliz
Mike Del Balso, CEO & Co-Founder at Tecton, presents "Full RAG," a novel approach to AI recommendation systems, aiming to push beyond the limitations of traditional models through a deep integration of contextual insights and real-time data, leveraging the Retrieval-Augmented Generation architecture. This talk will outline Full RAG's potential to significantly enhance personalization, address engineering challenges such as data management and model training, and introduce data enrichment with reranking as a key solution. Attendees will gain crucial insights into the importance of hyperpersonalization in AI, the capabilities of Full RAG for advanced personalization, and strategies for managing complex data integrations for deploying cutting-edge AI solutions.
For the full video of this presentation, please visit: https://www.edge-ai-vision.com/2024/06/building-and-scaling-ai-applications-with-the-nx-ai-manager-a-presentation-from-network-optix/
Robin van Emden, Senior Director of Data Science at Network Optix, presents the “Building and Scaling AI Applications with the Nx AI Manager,” tutorial at the May 2024 Embedded Vision Summit.
In this presentation, van Emden covers the basics of scaling edge AI solutions using the Nx tool kit. He emphasizes the process of developing AI models and deploying them globally. He also showcases the conversion of AI models and the creation of effective edge AI pipelines, with a focus on pre-processing, model conversion, selecting the appropriate inference engine for the target hardware and post-processing.
van Emden shows how Nx can simplify the developer’s life and facilitate a rapid transition from concept to production-ready applications.He provides valuable insights into developing scalable and efficient edge AI solutions, with a strong focus on practical implementation.
Essentials of Automations: The Art of Triggers and Actions in FMESafe Software
In this second installment of our Essentials of Automations webinar series, we’ll explore the landscape of triggers and actions, guiding you through the nuances of authoring and adapting workspaces for seamless automations. Gain an understanding of the full spectrum of triggers and actions available in FME, empowering you to enhance your workspaces for efficient automation.
We’ll kick things off by showcasing the most commonly used event-based triggers, introducing you to various automation workflows like manual triggers, schedules, directory watchers, and more. Plus, see how these elements play out in real scenarios.
Whether you’re tweaking your current setup or building from the ground up, this session will arm you with the tools and insights needed to transform your FME usage into a powerhouse of productivity. Join us to discover effective strategies that simplify complex processes, enhancing your productivity and transforming your data management practices with FME. Let’s turn complexity into clarity and make your workspaces work wonders!
Best 20 SEO Techniques To Improve Website Visibility In SERPPixlogix Infotech
Boost your website's visibility with proven SEO techniques! Our latest blog dives into essential strategies to enhance your online presence, increase traffic, and rank higher on search engines. From keyword optimization to quality content creation, learn how to make your site stand out in the crowded digital landscape. Discover actionable tips and expert insights to elevate your SEO game.
Goodbye Windows 11: Make Way for Nitrux Linux 3.5.0!SOFTTECHHUB
As the digital landscape continually evolves, operating systems play a critical role in shaping user experiences and productivity. The launch of Nitrux Linux 3.5.0 marks a significant milestone, offering a robust alternative to traditional systems such as Windows 11. This article delves into the essence of Nitrux Linux 3.5.0, exploring its unique features, advantages, and how it stands as a compelling choice for both casual users and tech enthusiasts.
2. 562 S. Chattopadhyay et al. / Brain, Behavior, and Immunity 21 (2007) 561–568
deletion or pharmacologic inhibition reduces injury- and 20 min at room temperature), non-speciWc binding was blocked
induced macrophage recruitment and protects nerves from with 10% normal goat serum, followed by a rabbit anti-MMP-9 anti-
body incubation (see above) overnight at 4 °C, goat anti-rabbit IgG
axonal degeneration (Shubayev et al., 2006). (Vector) and avidin-biotin complex (ABC Elite, Vector) application.
In the central nervous system, MMP-9 is fundamental to Sections were developed with DAB (brown stain, Vector).
myelination (Yong, 2005), in part, by degradation of myelin (2) ImmunoXuorescence: 0.5% sodium borohydride in 1% dibasic sodium
basic protein (MBP) (Gijbels et al., 1993; Proost et al., phosphate buVer was applied for 5 min to block endogenous aldehyde
1993). While MBP constitutes only 10–20% of PNS myelin groups, followed by Dako antigen retrieval, non-speciWc binding block
in 5% goat serum for 30 min, mouse anti-MBP antibody (see above)
(Jacobs, 2005), it is critical to maintaining integrity and overnight at 4 °C, alexa goat anti-mouse 488 antibody for 1 h, and
compactness of peripheral nerve in development (Martini nuclear 4 ,6-diamidino-2-phenylindole (DAPI) stain (Molecular
and Schachner, 1997) and after injury (LeBlanc and Podu- Probes, 1:20000, blue) for 5 min. Sections were mounted using Slowf-
slo, 1990). The importance of MMP-9 in peripheral nerve ade gold antifade reagent (Molecular Probes). PBS was used for all
demyelination has been documented (Redford et al., 1995, washes.
1997; Kieseier et al., 1999a,b; Siebert et al., 2001), but the
mechanism of its action has not been clariWed. 2.4. Real-time qPCR
The purpose of this study is to address whether activa-
Sciatic nerve fragments and L5/L4 DRG samples were pooled from 2
tion of peripheral glia by proinXammatory cytokines rats and stored in RNA-later (Ambion) at ¡20 °C. Total RNA was
induces MMP-9 expression in vivo, and to analyze the role extracted with Trizol (Invitrogen) and treated with RNase-free DNAse I
of MMP-9 in controlling MBP levels and demyelination (Qiagen). The RNA purity was veriWed by OD260/280 absorption ratio
after peripheral nerve injury. of about 2.0. cDNA was synthesized using SuperScript II Wrst-strand
RT-PCR kit (Invitrogen). Gene expression was measured by quantita-
tive real-time polymerase chain reaction (qPCR, MX4000, Stratagene,
2. Methods La Jolla, CA) using 50 ng of rat cDNA and 2£ Taqman Universal PCR
Master Mix (Applied Biosystems) with a one-step program (95 °C for
2.1. Animal surgery 10 min, 95 °C for 30 s and 60 °C for 1 min for 50 cycles). Primers and
Taqman probes for MMP-9 from Biosearch Technologies (Novato, CA)
Adult female Sprague–Dawley rats (n D 133; 250 g, Harlan Labs), were optimized using injured sciatic nerve cDNA (ampliWcation
MMP-9 knockout (n D 25, FVB.Cg-Mmp9tm1Tvu/J) and wild-type mice eYciency of 100.1–100.3%), as reported earlier (Shubayev et al., 2006).
(n D 25, FVB/NJ), TNFR1 (n D 8, B6.129-Tnfrsf1atm1Mak/J), TNFR1/2 Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) gene was used as
knockout (n D 8, B6.129S-Tnfrsf1atm1Imx Tnfrsf1btm1Imx/J) and wild-type a normalizer, and its expression was conWrmed to be not regulated in
(n D 8, B6129SF2/J) mice were used. All mouse strains were obtained from injured and uninjured nerves. Duplicate samples without cDNA (no-
Jackson Laboratory (Bar Harbor, ME). Anesthesia was induced with 4% template control) for each gene showed no contaminating DNA. Rela-
IsoXurane (IsoSol; Vedco, St. Joseph, MO), the sciatic nerve was exposed tive mRNA levels were normalized to GAPDH, Wve samples per group
unilaterally at the mid-thigh level, and crushed using Wne, smooth-surface were quantiWed using the comparative Ct method (Livak and Schmitt-
forceps twice for 5 s each to produce nerve crush. Nerve injections were gen, 2001), and a fold change was determined by the MX4000 (PfaZ,
made into uninjured rat sciatic nerves using a Hamilton syringe, a 30- 2001).
gauge-needle and an injectate volume of 5 l. Animals were sacriWced
using an intraperitoneal injection of a cocktail containing sodium pento- 2.5. Gelatin zymography
barbital (Nembutal, 50 mg/ml; Abbott Labs, North Chicago, IL) diaze-
pam (5 mg/ml, Steris Labs, Phoenix, AZ) and saline (0.9%, Steris Labs) in a
Nerves were lysed in non-reducing, protease-inhibitor-free Laemmli
volume proportion of 1:1:2, respectively. All procedures were performed
sample buVer, heated at 55 °C for 5 min and 50 g tissue per well was
according to protocols approved by the VA Healthcare System Commit-
run on 10% SDS polyacrylamide gel containing 1 mg/ml of gelatin at
tee on Animal Research, and conform to the NIH Guidelines for Animal
160 V for 90 min (Shubayev and Myers, 2000). The gels were washed in
Use.
2.5% Triton X-100, developed at 37 °C overnight in 50 mM Tris–HCl,
150 mM NaCl, 5 mM CaCl 2, 1 M ZnCl2, and 0.2 mM sodium azide
2.2. Antibodies and proteins (pH 7.6) and stained with colloidal blue (Invitrogen), indicating gelatin-
olytic MMP activity as a clear band on a dark background of unde-
Recombinant rat TNF- (R&D Systems), IL-1 (Pierce) or NGF graded gelatin. Inverted images are presented. Recombinant human
(Invitrogen) were delivered into sciatic nerve at 250 pg per rat, or bovine MMP-9 (Chemicon) was used for control. Zymograms were digitized
serum albumin (BSA, Sigma, 0.1%, vehicle) in 5 l volume as previously using an EC3 Darkroom (UVP Imaging) and quantiWed by LabWorks
described (Wagner and Myers, 1996). The following antibodies were used 4.5. Data are expressed as relative optical density (OD) of gelatinolytic
for immunodetection: rabbit anti-MMP-9 (Torrey Pines Labs, 1:500), activity.
mouse anti-MBP (Abcam, 1:50), rabbit anti-S100 (Dako, 1:2000), and
mouse anti- -actin (Sigma, 1:10,000). Respective normal serum or IgG
was used for negative control. All antibodies were diluted in 1% blocking
2.6. Western blotting
serum in PBS.
Nerves were lysed in Laemmli buVer containing 10 mM PMSF, 5 mM
EDTA, protease inhibitor cocktail (Sigma) (pH 6.8) as previously
2.3. Immunohistochemistry
described (Shubayev and Myers, 2000), reduced with 10% -mercap-
toethanol (Fisher), and 30–50 g of protein (BSA Protein Assay, Pierce)
ParaYn-embedded, 4% paraformaldehyde-Wxed nerve sections (10-
was run on 15% SDS–PAGE in a Laemmli system. Proteins were trans-
m-thick) were deparaYnized with xylenes, rehydrated in graded ethanol
ferred to nitrocellulose at 50 V for 60 min in transfer buVer (12 mM Tris–
PBS and subjected to detection as previously described (Shubayev and
base, 95 mM glycine, and 20% methanol, pH 8.3). Non-speciWc binding
Myers, 2002) and summarized below:
was blocked in 5% non-fat dry milk (Bio-Rad) followed by a primary
(1) Dilaminobenzidine (DAB): endogenous peroxidase was blocked with antibody incubation overnight at 4 °C, HRP-tagged goat anti-mouse or
3% H2O2, antigen retrieval (Dako, Carpinteria, CA) (5 min at 95 °C anti-rabbit IgG, and detection with enhanced chemiluminescence
3. S. Chattopadhyay et al. / Brain, Behavior, and Immunity 21 (2007) 561–568 563
(Amersham). Molecular weight was determined using HRP-tagged
SDS–PAGE standards (Bio-Rad). Blots were digitized using an EC3
Darkroom (UVP Imaging) and quantiWed by LabWorks 4.5. Data are
expressed as relative optical density (OD) ratios of experimental to con-
trol proteins.
2.7. Spontaneous pain behavior
Spontaneous pain behavior was measured according to the method
described by Attal et al. (Attal et al., 1990; Paulson et al., 2002) in MMP-9
knockout (n D 10) and wild-type mice (n D 10) after sciatic nerve crush for
2 weeks. Each animal was placed in a plexiglass cylinder (19 cm £ 31 cm)
and allowed to habituate. One animal at a time was continuously observed
for 2 min. This was repeated 2 more times within the next 2 h. DiVerent
positions of the injured hind paw were continuously rated, according to
the following numerical scoring system: 0 D the paw is placed normally on
the Xoor, 1 D the paw is placed lightly on the Xoor and the toes are in a
ventroXexed position, 2 D only the internal edge of the paw is placed on
the Xoor, 3 D only the heel is placed on the Xoor and the hind paw is in an
inverted position, 4 D the whole paw is elevated, and 5 D the animal licks
the paw. During each 2 min (120 s) test period, measurements were taken
continuously by a tester blinded to the experimental groupings. In practi-
cal terms, this was done by pressing one of six (0–5) numerical keys on a Fig. 1. MMP-9 mRNA expression after sciatic nerve crush. Real-time
computer keyboard. Only one key was pressed at a time, corresponding to Taqman qPCR for MMP-9 in nerve and ipsilateral DRG. Data are
the instantaneous behavior of the animal. This resulted in a continuous expressed as the mean fold increase §SE in crushed relative to uninjured
120 s evaluation of the behavior that could be parsed oV-line into seconds/ groups, n D 10/group, ¤p < 0.05, ¤¤p < 0.01, by one-way ANOVA and
behavior during the experimental period. An index for noxious behavior Tukey’s post hoc. Note an 87-fold increase in MMP-9 mRNA in nerve at
was calculated by multiplying the amount of time the mice spent in each 1 day that is gradually reduced by 60 days after crush.
behavior multiplied by a weighting factor for that behavior, and divided
by the length of the observational period, using the formula:
[0t0 + 1t1 + 2t2 + 3t3 + 4t4 + 5t5]/120 s, where t0–t5 are the durations in sec- MMP-9 mRNA was observed after NGF, TNF- and IL-
onds spent in behaviors 0–5, respectively. The three values corresponding 1 injection relative to BSA (vehicle) injection and unin-
to three blocks of 120 s were averaged to determine the spontaneous pain jured nerve. However, BSA injection did cause some
score for each mouse.
MMP-9 induction relative to uninjured nerve. Immuno-
histochemical analysis of MMP-9 after TNF- injection
3. Results paralleled the mRNA and protein expression data, and
identiWed myelinated Schwann cells as a chief source of
3.1. MMP-9 expression in crushed rat sciatic nerve and MMP-9 in response to cytokine injections. Again, we
corresponding DRG observed a mild increase in MMP-9 after BSA injection,
but a robust increase after TNF- injection, comparable
The patterns of MMP-9 mRNA expression were ana- to that of Day 1 crush. Some axonal reactivity was noted
lyzed during the course of Wallerian degeneration after rat in TNF- -injected and crushed nerves, probably due to
sciatic nerve crush (Fig. 1). MMP-9 expression in nerve was increased neuronal-glial interaction. The overall histolo-
robustly elevated (86.9 § 7.78-fold) at 1 day after crush, and pathological changes in cytokine-injected nerves were
gradually returned to baseline by 60 days post-crush. In the mild and comparable to that of crushed nerves.
corresponding DRG, MMP-9 expression was moderately To identify a speciWc pathway of TNF- -mediated
stable throughout the course of injury, showing a signiW- MMP-9 induction, we assessed MMP-9 activity in TNF-
cant 2.65 § 0.28 increase only at 2 weeks post-crush. receptor 1 (TNFR1) knockout and TNFR1 and TNFR2
double-knockout mouse nerves at Day 1 after crush
3.2. Cytokines regulate MMP-9 expression in peripheral (Fig. 3). Similar to TNF- knockout (Shubayev et al.,
nerve 2006), we observed only a mild decline of MMP-9 in
TNFR1 and TNFR1/2 knockouts. There was no signiW-
Pro-inXammatory cytokines activate glia after nerve cant diVerence in MMP-9 activity between TNFR1
injury. MMP-9 in peripheral nerve is produced only after knockouts and TNFR1/2 double-knockout mice, suggest-
injury, predominantly by Schwann cells (Shubayev and ing that TNFR1 is the main TNF- receptor to mediate
Myers, 2000, 2002). Cytokines and trophic factors are MMP-9 expression. These data suggest that high MMP-9
known inducers of MMP-9 (Nagase, 1997). Twenty-four levels in knockout cytokine nerve injury models is main-
hours after we injected recombinant rat TNF- , IL-1 or tained due to compensatory activation of related mecha-
NGF proteins into normal sciatic nerve, MMP-9 mRNA nisms, such as IL-1 . Together, these data support the
(Fig. 2A) and proteolytic activity (Fig. 2B) were analyzed. hypothesis that Schwann cell activation by several impor-
Day 1 crushed and uninjured nerves served as positive and tant cytokine and trophic pathways results in MMP-9
negative controls, respectively. A signiWcant increase in induction.
4. 564 S. Chattopadhyay et al. / Brain, Behavior, and Immunity 21 (2007) 561–568
Fig. 2. Cytokine-induced MMP-9 expression in sciatic nerve. (A) Real-time Taqman qPCR for MMP-9. Data are expressed as the mean fold increase §SE
in injected relative to uninjured nerves, n D 10/group. Statistics: (¤p < 0.05, relative to uninjured nerve, #p < 0.05, relative to vehicle group by one-way
ANOVA and Tukey’s post hoc). Crushed (Day 1) nerves were used for positive control. (B) Gelatin zymography (inverted image) demonstrates increased
MMP-9 activity in nerve after NGF, TNF- and IL-1 injection. Uninjured and crushed (Day 1) nerves are used as negative and positive controls, respec-
tively (n D 6/group). (C) MMP-9 immunoreactivity after TNF- injection showing myelinated Schwann cell (arrow) reactivity is similar to the endogenous
MMP-9 changes after crush. Micrographs are representative of four animals/group (100£ objective magniWcation).
3.3. MMP-9 inXuences neuropathic pain behavior (52 kDa) relative to wild-type (Fig. 5A and B). No change in
S100 (common Schwann cell marker, 13 kDa) or -actin (pro-
We sought to determine if MMP-9, as a cytokine-medi- tein loading control, 42 kDa) was seen. Calibration of MBP to
ated factor, regulates neuropathic pain. Spontaneous pain S100 levels indicates that MBP protection in MMP-9 knock-
behavior was scored in a blinded fashion in MMP-9 knock- out nerves is not related to the changes in Schwann cell viabil-
out and wild-type animals for 2 weeks after nerve crush ity. ImmunoXuorescence for MBP (green) and the nuclear
(Fig. 4). MMP-9 knockout mice expressed less pain, as indi- stain, DAPI (blue) (Fig. 5C), paralleled observation of the
cated by a statistically signiWcant decline in the pain index Western blot, showing preserved MBP levels and myelin
relative to wild-type animals, at 2 days and at 8 and 10 days thickness after MMP-9 deletion.
after crush. MMP-9 deletion, however, did not facilitate These data indicate that in the PNS, MMP-9 regulates
recovery from neuropathic pain, demonstrating the same MBP turnover and myelin thickness, while MMP-9 gene
score of 0.8 in both groups at 2 weeks after crush. deletion protects, concurrently, from neuropathic pain and
myelin degradation.
3.4. MMP-9 controls myelin protein content after nerve
injury 4. Discussion
While MMP-9 importance in regulating MBP turnover in This study demonstrates that in peripheral nerve MMP-
CNS is well-accepted, its role in processing MBP in peripheral 9 is induced within a day after injury in response to proin-
nerve has not been analyzed. MMP-9 knockout and wild-type Xammatory cytokines, and that MMP-9 gene deletion
mouse nerves were analyzed for MBP protein levels at 10 reduces neuropathic pain behavior in concordance with
days after crush (Fig. 5). At this time-point, animals display preserved myelin integrity.
reduced pain behavior (see Fig. 4), and MBP levels in wild- MMP-9 increase within 1 day after nerve injury, preced-
type injured sciatic nerve are normalized after initial demye- ing neuropathological evidence of degeneration, has been a
lination (Gupta et al., 1988; LeBlanc and Poduslo, 1990); we consistent observation (La Fleur et al., 1996; Kherif et al.,
conWrmed the latter observation (not shown). MMP-9 gene 1998; Ferguson and Muir, 2000; Shubayev and Myers,
deletion caused almost a 2-fold increase in unprocessed MBP 2000, 2002, 2006; Platt et al., 2003). TNF- induces MMP-9
5. S. Chattopadhyay et al. / Brain, Behavior, and Immunity 21 (2007) 561–568 565
Fig. 4. MMP-9 gene deletion reduces painful behavior. Unstimulated pain
score was recorded in MMP-9¡/¡ and control FVB mice for 2 weeks
after sciatic nerve crush. DiVerent positions of the injured hind paw were
rated in each animal for 15 minutes (3 £ 300 s) using 0–5 numerical scale
(see methods); data expressed as mean § SE. Note reduction in pain score
in MMP-9¡/¡ animals, n D 10/group, ¤p < 0.05 knockout vs. wild-type by
one-way ANOVA and Tukey’s post hoc.
Poduslo, 1990). While MMP-9-dependent degradation of
MBP has been shown in models of multiple sclerosis (Gij-
Fig. 3. Partial reduction in MMP-9 in nerve after TNF- receptor dele- bels et al., 1993; Proost et al., 1993) and cerebral ischemia
tion. Gelatin zymography (inverted image) demonstrates partial reduction (Asahi et al., 2001; Cho et al., 2006), this is the Wrst demon-
in MMP-9 activity in crushed (Day 1) TNFR1 knockout and TNFR1
and 2 double-knockout nerves. Densitometry (graph, n D 6/group,
stration of this relationship in the PNS. Other MMPs, such
mean § SE), ¤p < 0.05 knockout vs. wild-type by Student’s t-test. as MMP-12 (Larsen et al., 2006) and MMP-3 (D’Souza and
Moscarello, 2006), regulate MBP processing in the CNS
in the CNS (Rosenberg et al., 1995), in injured sciatic nerve and may play a role in peripheral nerve. MMP-9 is also
(Shubayev et al., 2006), and as shown here, in uninjured sci- involved in myelination via interaction with proteoglycans
atic nerve. While this study emphasizes the importance of and growth factors (Yong, 2005). While MMP-9 promotes
TNF- , it also implicates IL-1 and NGF in MMP-9 TNF- -mediated macrophage recruitment into the injured
induction in peripheral nerve. IL-1 upregulates MMP-9 in nerve (Shubayev et al., 2006), neither TNF- (Liefner et al.,
optic nerve (Zhang and Chintala, 2004) and brain (Vecil 2000) nor MMP-9 (Siebert et al., 2001) alter the myelin
et al., 2000), and NGF is known to induce MMP-9 in cul- phagocytosing function of macrophages, suggesting that
tured neurons (Muir, 1994; Shubayev and Myers, 2004). their roles in demyelination is not secondary to the ability
The ability of the vehicle injection to cause the increase in to modulate macrophage recruitment.
MMP-9 is consistent with observations of mild inXamma- Activation of Schwann cells has been implicated in the
tory response to sham surgeries (Kleinschnitz et al., 2005). pathogenesis of neuropathic pain (McMahon et al., 2005;
We observed that Schwann cells produce MMP-9 in Myers et al., 2006). Here, we observed a delayed, mild but
response to TNF- in vivo, in accordance with our earlier statistically signiWcant reduction in pain behavior after
studies in cultured primary Schwann cells (Shubayev et al., MMP-9 gene deletion. The delay in mechanical allodynia
2006). However, other endoneurial cells can upregulate is characteristic of other neuroprotective models, such as
MMP-9 (Shubayev and Myers, 2002), and may do so in the spontaneous WldS mutant mouse model of delayed
response to cytokines, as has been shown for Wbroblasts Wallerian degeneration (Sommer and Schafers, 1998),
(Singer et al., 1999) and endothelial cells (Genersch et al., which fails to induce MMP-9 and TNF- (Shubayev
2000). It remains to be determined whether Schwann cells et al., 2006). The mild eVect may point to the secondary
of diVerent phenotypes equally respond to TNF- chal- role of MMP-9 in pain or compensatory mechanisms of
lenge by increasing MMP-9 production. Central micro- and MMP-9 knockout. To date, two other studies directly
macroglia also produce MMP-9 in response to injury assessed the eVect of MMP inhibition on neuropathic
(Hughes et al., 2002; Rosenberg, 2002; Lee et al., 2004b). pain. MT5-MMP gene deletion virtually ablated mechan-
MMP-9 is a critical mediator of demyelination in the ical allodynia associated with partial sciatic nerve liga-
central (Rosenberg, 2002) and peripheral (Kieseier et al., tion (Komori et al., 2004), and synthetic inhibitor TAPI
1999b) nervous systems. It is known to control the break- signiWcantly reduced thermal hyperalgesia and mechani-
down of MBP (Chandler et al., 1995), a late component of cal allodynia after chronic constriction injury in mice
myelin formation that is produced by Schwann cells in (Sommer et al., 1997). TAPI inhibits TNF- activation by
injured peripheral nerve (Gupta et al., 1988; LeBlanc and chelating TNF- converting enzyme (TACE) and, at
6. 566 S. Chattopadhyay et al. / Brain, Behavior, and Immunity 21 (2007) 561–568
Fig. 5. MMP-9 regulates MBP turnover. Western blot (A) and immunoXuorescence (B) for myelin basic protein (MBP) in crushed (day 10) MMP-9
knockout nerves showed preserved MBP (myelinating Schwann cell marker) and no change in S100 (Schwann cell marker) or -actin (loading control).
Densitometry was done in n D 8/group. Dual-immunoXuorescence for MBP (green) and nuclear stain DAPI (blue) shows preserved MBP and myelin
thickness after MMP-9 deletion (B). Micrographs are representative of n D 4/group (100£ objective magniWcation).
higher doses, MMP-9 and other MMPs. MMP inhibition kine and MMP expression between mouse and rat nerve
also improves electrophysiologic nerve conduction and crush models, but certain signaling diVerences between
motor performance (Leppert et al., 1999; Hsu et al., the species might exist.
2006). In conclusion, this study suggests that MMP-9 is a sensi-
Observation of unstimulated foot positioning is com- tive biomarker of peripheral nerve injury that is regulated
monly done in the formalin test, and is used here to moni- by multiple cytokine pathways. MMP-9 deletion protects
tor long-lasting or tonic pain, the most common features of nerve Wbers by preservation of MBP protein levels and
clinical painful neuropathy. This test correlates well with myelin thickness and reduces spontaneous pain behaviors.
hyperalgesia to mechanical and thermal stimuli in major
models of experimental neuropathy (Attal et al., 1990). Our Acknowledgments
study suggests that MMP-9 role in demyelination relates to
the basic mechanisms of neuropathic pain. Demyelination The authors thank Jenny Dolkas, Amy Friedrich, and
of injured aVerents is known to cause ectopic discharge and Mila Angert for expert technical assistance. This work is
neuropathic nociception due to remodeling of the exposed supported by the Department of Veterans AVairs and the
axonal membrane, such as sodium channel insertion that is NIH Grant NS18715.
normally inhibited by myelin (Devor, 2006). Mechanical
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