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Practical Considerations of
OCDA I Implementation and
           l    t ti     d
Customization
                                                           November 6th, 2012

                                                           Mike Grossman
                                                           VP, Clinical Data Warehousing
                                                           and Analytics
                                                           BioPharm Systems


         Oracle Health Sciences User group November 2012                     PREVIOUS
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Agenda


•   Oracle Clinical Development Analytics (OCDA)
•   OCDA Architecture
          A hit t
•   Example Star Schemas
•   OCDA Implementation Challenges




                     Oracle Health Sciences User group November 2012   PREVIOUS
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                                                                                            NEXT
Agenda


•   Oracle Clinical Development Analytics (OCDA)
•   OCDA Architecture
          A hit t
•   Example Star Schemas
•   OCDA Implementation Challenges




                     Oracle Health Sciences User group November 2012   PREVIOUS
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Oracle Clinical Development Analytics (OCDA)


• OCDA is an extensible warehouse and reporting solution
  that supports Clinical Operations and Clinical Data
  Management
• OCDA combines data from CTMS and EDC/CDMS
• OCDA includes pre-packaged interactive dashboards and
  reports
• OCDA i l d a d t warehouse optimized f
          includes data       h        ti i d for
  understanding the running of trials



                      Oracle Health Sciences User group November 2012   PREVIOUS
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Agenda


•   Oracle Clinical Development Analytics (OCDA)
•   OCDA Architecture
          A hit t
•   Example Star Schemas
•   OCDA Implementation Challenges




                     Oracle Health Sciences User group November 2012   PREVIOUS
                                                                       PREVIOUS   Slide 5   NEXT
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OCDA Architecture
                                                  Oracle BI Enterprise Edition Plus
                                                                                                                             Duration of Open Discrepancies




                                                                                                      MS Office            iPhone
                                Interactive Dashboards                Proactive Alerts
    Ad‐hoc Analysis                                                                                  Integration         Integration


            Integrated Clinical Warehouse Built on Oracle Life Sciences Data Hub and 11gR2 RDBMS
    CDA Informatica                                                         CDA Informatica 
       SDE ETL                                                                  SIL ETL                 CDA Clinical Warehouse 
                                     CDA Staging Tables
                                                                                                               Schemas




      Oracle Clinical                                                   Seibel Clinical
Note: SDE  (Source Dependant Extract) / SIL (Source Independent Load)
                                                   Oracle Health Sciences User group November 2012                         PREVIOUS
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                                                                                                                                                                        NEXT
Agenda


•   Oracle Clinical Development Analytics (OCDA)
•   OCDA Architecture
          A hit t
•   Example Star Schemas
•   OCDA Implementation Challenges




                     Oracle Health Sciences User group November 2012   PREVIOUS
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Example Star Schemas

                                               Product

                                                                    Study
                        g p y
                     Geography
                                                                    •Study Team




                 Case                      Discrepancy 
                                                 p y
                Report 
                Report                                                              Site
                 Form                          Fact




                                                                     Study‐Site
                                                                         y
                          Party                                      •Study‐Site 
                                                                      Team

                                                Study 
                                               Subject




                          Oracle Health Sciences User group November 2012                  PREVIOUS
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                                                                                                                NEXT
Example Star Schemas


                                                Product


                           Day                                         Program




               Geography
                                           Study Site                        Study
                                           Status Fact                       •Study Team




                     Study Site
                                                                        Study 
                     •Study Site                                        Region
                      Team

                                                  Site




                           Oracle Health Sciences User group November 2012                 PREVIOUS
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                                                                                                                NEXT
Example Star Schemas

                                                    Product
                                                  Product
                                                                                                        Day
    Case 
   Report 
   R
    Form
                                                   Study
                                                Study
                                                   •Study Team
                                                •Study Team


                                                                                          Study Site               Program
                       Discrepancy 
    Party                  Fact                                                           Status Fact
                                                Geography
                                                  Geography



                                                                                                              Study 
              Study                                                                                           Region
             Subject                             Study Site
                                                   Study‐Site
                                                     y y                        Site
                                                                                   Site
                                                 •Study Site 
                                                    •Study‐Site 
                                                  Team
                                                     Team



                              Oracle Health Sciences User group November 2012                           PREVIOUS
                                                                                                        PREVIOUS    Slide 10   NEXT
                                                                                                                               NEXT
Agenda


•   Oracle Clinical Development Analytics (OCDA)
•   OCDA Architecture
          A hit t
•   Example Star Schemas
•   OCDA Implementation Challenges




                     Oracle Health Sciences User group November 2012   PREVIOUS
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OCDA Implementation Challenges


• Multiple OC Instances
• S
  Sources other than/in addition to OC and SC
            th th /i dditi t             d
• Preserving customizations across OCDA releases
   – Various customizations to vanilla SC product
   – Additional Operating Metrics not supported out-of-the-box by OCDA
• Duplicate Study, Site, Subject, etc data in OC and SC




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OCDA Implementation Challenges - Adding a new OC Source Instance




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OCDA Implementation Challenges - Adding a new OC Source Instance-Notes


• No new programming, only LSH configuration to define
  new staging area for the new OC instance
• SDE logic same as shipped by Oracle
• Use of LSH View Object to pool data from the 2 OC
  instances
• Assumption: no common study or other data among the
  various sources
     i
• Note: Control Table Logic needs to be modified to make
  sure the additional pooling step does not break the
  incremental load logic
                       Oracle Health Sciences User group November 2012   PREVIOUS
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OCDA Implementation Challenges - Adding a new Source (RAVE)




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OCDA Implementation Challenges - Adding a new Source (RAVE)


• Each source entity must be conformed to the source
  independent structure
• Very careful design and development needed for defining
  new SDE’s for RAVE and conforming them to the structure
  that OCDA Pooling area expects
• High effort
• A
  Assumption: no common study or other d t among th
          ti                t d     th data          the
  various sources



                     Oracle Health Sciences User group November 2012   PREVIOUS
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OCDA Implementation Challenges – Preserving Customizations on Upgrade




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OCDA Implementation Challenges – Preserving Customizations on Upgrade


                                               Advantages
• Clean separation of Oracle shipped OCDA code from
  customized code
• All ETL and Table Instances point to the original Oracle shipped
  definitions unless customized
• Central control table controlling incremental load for the entire
  OCDA installation
• Upgrades are safe and clean: all Oracle-shipped upgrades are
  applied t OCDA d
      li d to OCDA_domain, th not impacting any production
                           i thus t i        ti           d ti
  code. Automation can help compare differences between
  Oracle-shipped code and Production code making the decision
  to selectively accept the upgrades easier
               y     p       pg
•   Note: Control Table logic needs to be changed slightly to visually identify the various programs from different
    domains and selectively wipe out incremental load data when doing a full load for a domain


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Merging OC and SC Dimensions


• OCDA has match-merge capability built in
   – Winner Donor mapping table
     Winner-Donor
   – Winner-Donor may be populated with Oracle Healthcare Master
     Person Index (OHMPI)
   – Di
     Dimension SILs populate winner i f
            i SIL          l t i    information i Di
                                           ti in Dimension records
                                                        i        d
     based on the input from mapping table
• Determine and design how to populate the mapping table
  based on customer interviews
• Implement logic in the ETL flow to populate mapping table
  before Dimension SIL runs

                      Oracle Health Sciences User group November 2012   PREVIOUS
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Merging OC and SC Dimensions – Case Study from Actual Customer
Implementation

• Requirement to match and merge SC and OC Studies and
  Study-Sites
      y
• SC has been customized so that
   – SC Protocol table holds either the matching OC Study name or Study
     ID
   – SC Site table holds either the matching OC Study-Site ID or Study-Site
     code
   – Users can manually override this mapping in a separate table
• Merge Program runs after the Study and Study-Site Pooling
  Step and populates the mapping table with winner-donor
  information
• Out-of-the-box OCDA SIL logic takes care of the rest

                        Oracle Health Sciences User group November 2012   PREVIOUS
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Biography and Contact Us
•   Michael Grossman, BioPharm Systems' vice president of clinical data warehousing and
    analytics, is responsible for the design and implementation of clinical data warehousing
    and analytics applications. Prior to joining the company, he was senior director of health
    sciences strategy at Oracle for 10 years. One of his key accomplishments at Oracle was
    the initiation and development of Oracle Life Sciences Data Hub. Michael's career began
    at Hoffmann-La Roche, where he served as global head of clinical programming.

•   North America S l C t t
    N th A    i Sales Contact:
     Rod Roderick
     rroderick@biopharm.com
     +1 877 654 0033
•   Europe/Middle East/Africa Sales Contact:
     Rudolf Coetzee
     rcoetzee@biopharm.com
     +44 (0) 1865 910200
         ( )
•   General Inquiries:
     info@biopharm.com
                               Oracle Health Sciences User group November 2012   PREVIOUS
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Practical Considerations of Oracle Clinical Development Analytics Implementation and Customization

  • 1. Practical Considerations of OCDA I Implementation and l t ti d Customization November 6th, 2012 Mike Grossman VP, Clinical Data Warehousing and Analytics BioPharm Systems Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 1 NEXT NEXT
  • 2. Agenda • Oracle Clinical Development Analytics (OCDA) • OCDA Architecture A hit t • Example Star Schemas • OCDA Implementation Challenges Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 2 NEXT NEXT
  • 3. Agenda • Oracle Clinical Development Analytics (OCDA) • OCDA Architecture A hit t • Example Star Schemas • OCDA Implementation Challenges Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 3 NEXT NEXT
  • 4. Oracle Clinical Development Analytics (OCDA) • OCDA is an extensible warehouse and reporting solution that supports Clinical Operations and Clinical Data Management • OCDA combines data from CTMS and EDC/CDMS • OCDA includes pre-packaged interactive dashboards and reports • OCDA i l d a d t warehouse optimized f includes data h ti i d for understanding the running of trials Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 4 NEXT NEXT
  • 5. Agenda • Oracle Clinical Development Analytics (OCDA) • OCDA Architecture A hit t • Example Star Schemas • OCDA Implementation Challenges Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 5 NEXT NEXT
  • 6. OCDA Architecture Oracle BI Enterprise Edition Plus Duration of Open Discrepancies MS Office iPhone Interactive Dashboards Proactive Alerts Ad‐hoc Analysis Integration Integration Integrated Clinical Warehouse Built on Oracle Life Sciences Data Hub and 11gR2 RDBMS CDA Informatica CDA Informatica  SDE ETL SIL ETL CDA Clinical Warehouse  CDA Staging Tables Schemas Oracle Clinical Seibel Clinical Note: SDE  (Source Dependant Extract) / SIL (Source Independent Load) Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 6 NEXT NEXT
  • 7. Agenda • Oracle Clinical Development Analytics (OCDA) • OCDA Architecture A hit t • Example Star Schemas • OCDA Implementation Challenges Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 7 NEXT NEXT
  • 8. Example Star Schemas Product Study g p y Geography •Study Team Case  Discrepancy  p y Report  Report Site Form Fact Study‐Site y Party •Study‐Site  Team Study  Subject Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 8 NEXT NEXT
  • 9. Example Star Schemas Product Day Program Geography Study Site  Study Status Fact •Study Team Study Site Study  •Study Site  Region Team Site Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 9 NEXT NEXT
  • 10. Example Star Schemas Product Product Day Case  Report  R Form Study Study •Study Team •Study Team Study Site  Program Discrepancy  Party Fact Status Fact Geography Geography Study  Study  Region Subject Study Site Study‐Site y y Site Site •Study Site  •Study‐Site  Team Team Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 10 NEXT NEXT
  • 11. Agenda • Oracle Clinical Development Analytics (OCDA) • OCDA Architecture A hit t • Example Star Schemas • OCDA Implementation Challenges Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 11 NEXT NEXT
  • 12. OCDA Implementation Challenges • Multiple OC Instances • S Sources other than/in addition to OC and SC th th /i dditi t d • Preserving customizations across OCDA releases – Various customizations to vanilla SC product – Additional Operating Metrics not supported out-of-the-box by OCDA • Duplicate Study, Site, Subject, etc data in OC and SC Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 12 NEXT NEXT
  • 13. OCDA Implementation Challenges - Adding a new OC Source Instance Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 13 NEXT NEXT
  • 14. OCDA Implementation Challenges - Adding a new OC Source Instance-Notes • No new programming, only LSH configuration to define new staging area for the new OC instance • SDE logic same as shipped by Oracle • Use of LSH View Object to pool data from the 2 OC instances • Assumption: no common study or other data among the various sources i • Note: Control Table Logic needs to be modified to make sure the additional pooling step does not break the incremental load logic Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 14 NEXT NEXT
  • 15. OCDA Implementation Challenges - Adding a new Source (RAVE) Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 15 NEXT NEXT
  • 16. OCDA Implementation Challenges - Adding a new Source (RAVE) • Each source entity must be conformed to the source independent structure • Very careful design and development needed for defining new SDE’s for RAVE and conforming them to the structure that OCDA Pooling area expects • High effort • A Assumption: no common study or other d t among th ti t d th data the various sources Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 16 NEXT NEXT
  • 17. OCDA Implementation Challenges – Preserving Customizations on Upgrade Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 17 NEXT NEXT
  • 18. OCDA Implementation Challenges – Preserving Customizations on Upgrade Advantages • Clean separation of Oracle shipped OCDA code from customized code • All ETL and Table Instances point to the original Oracle shipped definitions unless customized • Central control table controlling incremental load for the entire OCDA installation • Upgrades are safe and clean: all Oracle-shipped upgrades are applied t OCDA d li d to OCDA_domain, th not impacting any production i thus t i ti d ti code. Automation can help compare differences between Oracle-shipped code and Production code making the decision to selectively accept the upgrades easier y p pg • Note: Control Table logic needs to be changed slightly to visually identify the various programs from different domains and selectively wipe out incremental load data when doing a full load for a domain Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 18 NEXT NEXT
  • 19. Merging OC and SC Dimensions • OCDA has match-merge capability built in – Winner Donor mapping table Winner-Donor – Winner-Donor may be populated with Oracle Healthcare Master Person Index (OHMPI) – Di Dimension SILs populate winner i f i SIL l t i information i Di ti in Dimension records i d based on the input from mapping table • Determine and design how to populate the mapping table based on customer interviews • Implement logic in the ETL flow to populate mapping table before Dimension SIL runs Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 19 NEXT NEXT
  • 20. Merging OC and SC Dimensions – Case Study from Actual Customer Implementation • Requirement to match and merge SC and OC Studies and Study-Sites y • SC has been customized so that – SC Protocol table holds either the matching OC Study name or Study ID – SC Site table holds either the matching OC Study-Site ID or Study-Site code – Users can manually override this mapping in a separate table • Merge Program runs after the Study and Study-Site Pooling Step and populates the mapping table with winner-donor information • Out-of-the-box OCDA SIL logic takes care of the rest Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 20 NEXT NEXT
  • 21. Biography and Contact Us • Michael Grossman, BioPharm Systems' vice president of clinical data warehousing and analytics, is responsible for the design and implementation of clinical data warehousing and analytics applications. Prior to joining the company, he was senior director of health sciences strategy at Oracle for 10 years. One of his key accomplishments at Oracle was the initiation and development of Oracle Life Sciences Data Hub. Michael's career began at Hoffmann-La Roche, where he served as global head of clinical programming. • North America S l C t t N th A i Sales Contact: Rod Roderick rroderick@biopharm.com +1 877 654 0033 • Europe/Middle East/Africa Sales Contact: Rudolf Coetzee rcoetzee@biopharm.com +44 (0) 1865 910200 ( ) • General Inquiries: info@biopharm.com Oracle Health Sciences User group November 2012 PREVIOUS PREVIOUS Slide 21 NEXT NEXT