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Hunting for PaNACEAs
Chris Waters
Department of Microbiology and Molecular Genetics
What would be the ideal activity for an anti-biofilm
compound?
+ Compound X
Potent and Novel Anti-biofilm Compounds that Enhance
Antibiotics (PaNACEAs)
Enhance tobramycin killing of P. aeruginosa biofilms
Tobramycin
• Aminoglycoside: binds to bacterial 30S
ribosomal subunit impairing protein
synthesis.
• Ototoxicity and nephrotoxicity
Cystic fibrosis
384 Pin tool + 384-well growth plate
Rinse plate
Treatment plate +250 mg/mL tobramycin
(planktonic MIC-1 mg/mL)
Rinse plate
The PaNACEA Screening Protocol
BacTiterGlo
Summary of the pilot screen
Performed pilot screen of 6,080 biologically active compounds
at the Center for Chemical Genomics.
Z-factor 0.6 (very good for actual biofilms!)
TRICLOSAN
• Colgate Total= 0.3% = 10 mM
• Mechanism of action: inhibits fatty acid synthesisfabI
• P. aeruginosa known to be resistant
-20
0
20
40
60
80
100
120
CF11 CF13 CF78 CF99 CF101 CF144 CF153
PercentBiofilmKilling
P. aeruginosa CF Strain
Tri
Tob
Tri/Tob
Triclosan/Tobramycin effectively kills the biofilms of
19/19 clinical isolates tested
Before
treatment
Tobramycin Triclosan Water
Tobramycin
+Triclosan
P. aeruginosa 2.50E+08 7.61E+06 4.93E+06 7.39E+06 3.86E+03
1.0E+00
1.0E+01
1.0E+02
1.0E+03
1.0E+04
1.0E+05
1.0E+06
1.0E+07
1.0E+08
1.0E+09
CFU/mouse
Triclosan/Tobramycin effective in vivo
Future Directions
1. Screen the additional compounds libraries at the
CCG
2. Identify mechanism of triclosan
3. Further characterize additional PaNACEAs
4. Move triclosan/tobramycin treatment forward
Waters Lab
Alessandra Hunt, PhD
Will Soto, PhD
Eric Bruger
Nico Fernandez
Michael Maiden
Ben Pursley
Geoff Severin
Meng Shieh
Rudy Sloup
Jake Gibson
Charnay Gloss
Jenny Nyberg
John Shook
Alumni: Lauren Priniski!
CCG-University of Michigan
Martha Larsen
Tom McQuade
David Sherman
Pamela Schultz
Carl Averang
Avi Raveh
Princeton University
Martin Semmelhak
Wei-wei Lao
Jiaqiang Dong
Eric Kim

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Hunting for PaNACEAs

  • 1. Hunting for PaNACEAs Chris Waters Department of Microbiology and Molecular Genetics
  • 2. What would be the ideal activity for an anti-biofilm compound? + Compound X Potent and Novel Anti-biofilm Compounds that Enhance Antibiotics (PaNACEAs)
  • 3. Enhance tobramycin killing of P. aeruginosa biofilms Tobramycin • Aminoglycoside: binds to bacterial 30S ribosomal subunit impairing protein synthesis. • Ototoxicity and nephrotoxicity Cystic fibrosis
  • 4. 384 Pin tool + 384-well growth plate Rinse plate Treatment plate +250 mg/mL tobramycin (planktonic MIC-1 mg/mL) Rinse plate The PaNACEA Screening Protocol BacTiterGlo
  • 5. Summary of the pilot screen Performed pilot screen of 6,080 biologically active compounds at the Center for Chemical Genomics. Z-factor 0.6 (very good for actual biofilms!)
  • 6. TRICLOSAN • Colgate Total= 0.3% = 10 mM • Mechanism of action: inhibits fatty acid synthesisfabI • P. aeruginosa known to be resistant
  • 7. -20 0 20 40 60 80 100 120 CF11 CF13 CF78 CF99 CF101 CF144 CF153 PercentBiofilmKilling P. aeruginosa CF Strain Tri Tob Tri/Tob Triclosan/Tobramycin effectively kills the biofilms of 19/19 clinical isolates tested
  • 8. Before treatment Tobramycin Triclosan Water Tobramycin +Triclosan P. aeruginosa 2.50E+08 7.61E+06 4.93E+06 7.39E+06 3.86E+03 1.0E+00 1.0E+01 1.0E+02 1.0E+03 1.0E+04 1.0E+05 1.0E+06 1.0E+07 1.0E+08 1.0E+09 CFU/mouse Triclosan/Tobramycin effective in vivo
  • 9. Future Directions 1. Screen the additional compounds libraries at the CCG 2. Identify mechanism of triclosan 3. Further characterize additional PaNACEAs 4. Move triclosan/tobramycin treatment forward
  • 10. Waters Lab Alessandra Hunt, PhD Will Soto, PhD Eric Bruger Nico Fernandez Michael Maiden Ben Pursley Geoff Severin Meng Shieh Rudy Sloup Jake Gibson Charnay Gloss Jenny Nyberg John Shook Alumni: Lauren Priniski! CCG-University of Michigan Martha Larsen Tom McQuade David Sherman Pamela Schultz Carl Averang Avi Raveh Princeton University Martin Semmelhak Wei-wei Lao Jiaqiang Dong Eric Kim