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What is bias and how can it affect
the outcomes from research?
Caroline A. Sabin
Dept. Infection and Population Health
UCL, Royal Free Campus
London, UK
Bias
• Bias occurs when there is a systematic difference
between the results from a study and the true
state of affairs
• Bias is often introduced when a study is being
designed, but can be introduced at any stage
• Appropriate statistical methods can reduce the
effect of bias, but may not eliminate it totally
• Increasing the sample size does not reduce bias
• Preferable to design the study in order to avoid
bias in the first place
Bias
 Many forms of bias exist – these can broadly
be categorised as forms of:
- Selection bias - patients included in the study are
not representative of the population to which the
results will be applied; or
- Information bias - occurs during data collection
when measurements on exposure and/or outcomes
are incorrectly recorded in a systematic manner
Selection bias
 Ascertainment bias
 Attrition bias (loss-to-follow-up)
 Healthy entrant effect
 Response bias
 Survivorship bias*
 Confounding*
Survivorship bias
 Occurs when survival is compared in patients
who do/do not receive an intervention, when
this becomes available sometime in the future
 To receive the intervention, patients must
survive until its introduction; anyone dying
prior to this time will not receive it
 It will appear that those who receive the
intervention have particularly good survival
compared to those who do not receive it
Example – Mortality rates after HIV
infection stratified by receipt of HAART
No HAART
HAART
Royal Free Hospital Haemophilia Cohort, June 2005
Example – End-stage liver disease in men
with haemophilia co-infected with HIV/HCV
MV Ragni et al; Haemophilia; 2009; 15; 552-558
Bias due to confounding
 Occurs when a spurious association arises due
to a failure to fully adjust for factors related to
both the risk factor and outcome
 Commonly encountered in cohort studies
Confounding
factor
Outcome
Factor of
interest
Confounding – treatment comparisons
 The reason why some patients were treated
with one regimen and others with a different
one is often unknown
 Whilst one treatment may appear to be
associated with a better outcome, these other
factors may explain the better outcome in
these patients
 Often referred to as ‘channelling bias’ in this
context
Example - Abacavir (ABC) and MI
• The D:A:D Study reported a significant
association between recent exposure to ABC and
the development of MI
• Adjusted rate ratio: 1.90, 95% CI 1.47-2.45
• Finding was unexpected as ABC was perceived to
be a ‘cardio-friendly’ option; in some clinics, ABC
was preferentially used in those with existing
cardiovascular risks
Confounding – example
Family history
of CVD
Future
development of MI
Treatment with ABC
or other NRTI
Features of patients starting each NRTI
for the first time in the D:A:D Study
Patients starting:
AZT ddI d4T 3TC ABC
Number of patients 5504 3593 2347 6718 7359
Male sex 69.5 70.9 72.7 71.2 74.7
Older age 20.0 22.5 20.8 20.6 28.1
BMI>26 kg/m2 17.0 16.5 18.6 17.1 15.0
Current/ex smoker 63.4 69.3 67.6 65.1 70.3
Family history of CVD 6.4 6.6 5.6 6.3 8.1
Diabetes 2.6 3.5 3.0 2.4 4.6
Hypertension 8.3 10.4 6.5 8.3 14.5
Dyslipidaemia 34.6 40.6 31.7 31.9 48.5
Moderate/high CHD risk 19.0 22.1 18.8 18.6 27.5
* Cell entries are the proportion of patients receiving each drug who fall into each category;
patients may fall into >1 category if they started >1 drug over follow-up
Adapted from: D:A:D Study Group. Lancet 2008; 371: 1417-1426
Dealing with confounding
• We use statistical methods (e.g. multivariable
regression, propensity scores) to remove the
effects of confounding
• Estimates from these models describe the
relationship between a drug and a toxicity, after
removing the effects of known confounders
• Whilst this approach is usually successful, all
methods will give biased results if unmeasured
(or unknown) confounding remains
Channelling bias in D:A:D?
• Findings unlikely to be explained by channelling
bias as:
- Association was significant after adjusting for known
CVD risks
- Association was reduced in those who discontinued ABC,
suggesting effect was reversible
- No association apparent for stroke, although likely to be
similar channelling
- No association apparent for tenofovir, although likely to
be similar channelling
Information bias
 Central tendency bias
 Lead-time bias*
 Measurement bias
 Misclassification bias
 Observer bias
 Regression dilution bias
 Regression to the mean
 Reporting bias
 Publication bias*
 Missing data*
Lead-time bias
 Clinical outcomes are generally better in those
who start HAART at a higher CD4 count
 This has been used as justification for
recommending that HAART is started at a
higher CD4 count
 However, those starting treatment at lower
CD4 counts have generally remained well long
enough for their CD4 counts to fall to this level
 Furthermore, patients who died before their
CD4 count fell to this level would be excluded
from the analysis
Lead-time bias – survival HAART
Time since start of therapy
50 cells/mm3
350 cells/mm3
Lead-time bias – survival after HAART
Time since start of therapy
50 cells/mm3
350 cells/mm3
Time since CD4 350
50 cells/mm3
350 cells/mm3
Lead-time
350 cells/mm3
Lead-time bias
 Studies that compare outcomes among
individuals starting HAART at different CD4
levels should not be used as evidence that
HAART should be started earlier
 Appropriate analyses attempt to ‘fill-in’ the
unmeasured time from a common baseline,
and information on patients who are likely to
have died before reaching the lower CD4 level
 E.g. NA-ACCORD, When to Start consortium
Publication bias
 Studies showing significant results are more
likely to be published than those showing non-
significant results
 Bias is generally less marked when the study
is large
 When performing a systematic review it is
important to obtain information on all studies
performed, whether or not they have been
published (e.g. abstracts, all journals including
non-English language ones)
Dealing with bias due to missing data
• Data are often missing in observational databases
• This doesn’t reflect poor patient management, but
reflects changing trends in patient monitoring as
well as restricted access to laboratory data
• If data are missing ‘at random’, then analyses
that exclude these patients will lack power
• If the data are not missing randomly, then the
results of analyses may be biased
• Multiple imputation methods can be used
Example – dealing with bias in cohorts
• We wished to describe the risk of hepatotoxicity
in patients treated with nevirapine (NVP)
compared to those treated with efavirenz (EFV)
• As NVP treatment has already been associated
with an increased risk of hepatotoxicity, it is
likely that patients with high baseline ALTs will be
treated with an alternative drug
• This may confound any relationships with
outcome – we must ‘adjust’ for the baseline ALT
in any analysis
Is NVP associated with a higher rate of
liver abnormalities than EFV?
• Eligible patients: all ARV-naïve patients in UK
CHIC who started treatment with either NVP
(n=1785) or EFV (n=4338) from 1/1/2000 to
1/1/2006 (n=6123)
• Data from patients receiving NVP+EFV (n=24)
shown for comparison
• Outcome variable: First ALT>200 IU after
starting HAART
Time to first ALT>200 IU among ARV-
naïve patients starting EFV or NVP
EFV
NVP
Probability of ALT
>200 IU (%)
Weeks after starting HAART
Time to first ALT>200 IU among ARV-
naïve patients starting EFV or NVP
Estimate – EFV vs NVP Relative
hazard
95% CI P-value
Unadjusted 1.32 0.90-1.92 0.16
Availability of baseline measurements
Initial HAART regimen
Baseline ALT
measurements
NVP EFV NVP+EFV P-value
Any ALT prior to start of
HAART
472 (26.4) 2066 (47.6) 20 (83.3) 0.0001
Median (IQR) baseline
ALT
26 (18, 38) 29 (21, 45) 37 (24, 44) 0.0001
N (%) with baseline ALT
>200 IU
0 (-) 27 (0.6) 0 (-) 0.004
Estimate – EFV vs NVP Relative
hazard
95% CI P-value
Unadjusted 1.32 0.90-1.92 0.16
Adjusting for baseline ALT
(including category for
missing)
0.70 0.47-1.04 0.08
Time to first ALT>200 IU among ARV-
naïve patients starting EFV or NVP
Estimate – EFV vs NVP Relative
hazard
95% CI P-value
Unadjusted 1.32 0.90-1.92 0.16
Adjusting for baseline ALT
(including category for
missing)
0.70 0.47-1.04 0.08
Adjusting for baseline ALT
(excluding those without
values)
0.51 0.34-0.76 0.001
Time to first ALT>200 IU among ARV-
naïve patients starting EFV or NVP
Availability of follow-up measurements
Initial HAART regimen
Follow-up ALT measurements NVP EFV P-value
Any ALT measurement in first
year after starting HAART
511 (28.6) 2053 (47.3) 0.0001
ALT available at 48 weeks after
starting HAART
250 (14.0) 937 (21.6) 0.0001
Median (IQR) ALT (IU) at 48
weeks
26 (18, 43) 26 (18, 40) 0.85
Summary
 If possible, should design studies to minimise
the opportunities for bias
 During analysis, must question whether bias
may have been introduced at any stage (e.g.
through loss-to-follow-up, missing data,
differential follow-up, etc.)
 Appropriate statistical methods may be used
to minimise the impact of bias, but are
unlikely to remove it fully

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How bias affects research outcomes and how to reduce its impact

  • 1. What is bias and how can it affect the outcomes from research? Caroline A. Sabin Dept. Infection and Population Health UCL, Royal Free Campus London, UK
  • 2. Bias • Bias occurs when there is a systematic difference between the results from a study and the true state of affairs • Bias is often introduced when a study is being designed, but can be introduced at any stage • Appropriate statistical methods can reduce the effect of bias, but may not eliminate it totally • Increasing the sample size does not reduce bias • Preferable to design the study in order to avoid bias in the first place
  • 3. Bias  Many forms of bias exist – these can broadly be categorised as forms of: - Selection bias - patients included in the study are not representative of the population to which the results will be applied; or - Information bias - occurs during data collection when measurements on exposure and/or outcomes are incorrectly recorded in a systematic manner
  • 4. Selection bias  Ascertainment bias  Attrition bias (loss-to-follow-up)  Healthy entrant effect  Response bias  Survivorship bias*  Confounding*
  • 5. Survivorship bias  Occurs when survival is compared in patients who do/do not receive an intervention, when this becomes available sometime in the future  To receive the intervention, patients must survive until its introduction; anyone dying prior to this time will not receive it  It will appear that those who receive the intervention have particularly good survival compared to those who do not receive it
  • 6. Example – Mortality rates after HIV infection stratified by receipt of HAART No HAART HAART Royal Free Hospital Haemophilia Cohort, June 2005
  • 7. Example – End-stage liver disease in men with haemophilia co-infected with HIV/HCV MV Ragni et al; Haemophilia; 2009; 15; 552-558
  • 8. Bias due to confounding  Occurs when a spurious association arises due to a failure to fully adjust for factors related to both the risk factor and outcome  Commonly encountered in cohort studies Confounding factor Outcome Factor of interest
  • 9. Confounding – treatment comparisons  The reason why some patients were treated with one regimen and others with a different one is often unknown  Whilst one treatment may appear to be associated with a better outcome, these other factors may explain the better outcome in these patients  Often referred to as ‘channelling bias’ in this context
  • 10. Example - Abacavir (ABC) and MI • The D:A:D Study reported a significant association between recent exposure to ABC and the development of MI • Adjusted rate ratio: 1.90, 95% CI 1.47-2.45 • Finding was unexpected as ABC was perceived to be a ‘cardio-friendly’ option; in some clinics, ABC was preferentially used in those with existing cardiovascular risks
  • 11. Confounding – example Family history of CVD Future development of MI Treatment with ABC or other NRTI
  • 12. Features of patients starting each NRTI for the first time in the D:A:D Study Patients starting: AZT ddI d4T 3TC ABC Number of patients 5504 3593 2347 6718 7359 Male sex 69.5 70.9 72.7 71.2 74.7 Older age 20.0 22.5 20.8 20.6 28.1 BMI>26 kg/m2 17.0 16.5 18.6 17.1 15.0 Current/ex smoker 63.4 69.3 67.6 65.1 70.3 Family history of CVD 6.4 6.6 5.6 6.3 8.1 Diabetes 2.6 3.5 3.0 2.4 4.6 Hypertension 8.3 10.4 6.5 8.3 14.5 Dyslipidaemia 34.6 40.6 31.7 31.9 48.5 Moderate/high CHD risk 19.0 22.1 18.8 18.6 27.5 * Cell entries are the proportion of patients receiving each drug who fall into each category; patients may fall into >1 category if they started >1 drug over follow-up Adapted from: D:A:D Study Group. Lancet 2008; 371: 1417-1426
  • 13. Dealing with confounding • We use statistical methods (e.g. multivariable regression, propensity scores) to remove the effects of confounding • Estimates from these models describe the relationship between a drug and a toxicity, after removing the effects of known confounders • Whilst this approach is usually successful, all methods will give biased results if unmeasured (or unknown) confounding remains
  • 14. Channelling bias in D:A:D? • Findings unlikely to be explained by channelling bias as: - Association was significant after adjusting for known CVD risks - Association was reduced in those who discontinued ABC, suggesting effect was reversible - No association apparent for stroke, although likely to be similar channelling - No association apparent for tenofovir, although likely to be similar channelling
  • 15. Information bias  Central tendency bias  Lead-time bias*  Measurement bias  Misclassification bias  Observer bias  Regression dilution bias  Regression to the mean  Reporting bias  Publication bias*  Missing data*
  • 16. Lead-time bias  Clinical outcomes are generally better in those who start HAART at a higher CD4 count  This has been used as justification for recommending that HAART is started at a higher CD4 count  However, those starting treatment at lower CD4 counts have generally remained well long enough for their CD4 counts to fall to this level  Furthermore, patients who died before their CD4 count fell to this level would be excluded from the analysis
  • 17. Lead-time bias – survival HAART Time since start of therapy 50 cells/mm3 350 cells/mm3
  • 18. Lead-time bias – survival after HAART Time since start of therapy 50 cells/mm3 350 cells/mm3 Time since CD4 350 50 cells/mm3 350 cells/mm3 Lead-time 350 cells/mm3
  • 19. Lead-time bias  Studies that compare outcomes among individuals starting HAART at different CD4 levels should not be used as evidence that HAART should be started earlier  Appropriate analyses attempt to ‘fill-in’ the unmeasured time from a common baseline, and information on patients who are likely to have died before reaching the lower CD4 level  E.g. NA-ACCORD, When to Start consortium
  • 20. Publication bias  Studies showing significant results are more likely to be published than those showing non- significant results  Bias is generally less marked when the study is large  When performing a systematic review it is important to obtain information on all studies performed, whether or not they have been published (e.g. abstracts, all journals including non-English language ones)
  • 21. Dealing with bias due to missing data • Data are often missing in observational databases • This doesn’t reflect poor patient management, but reflects changing trends in patient monitoring as well as restricted access to laboratory data • If data are missing ‘at random’, then analyses that exclude these patients will lack power • If the data are not missing randomly, then the results of analyses may be biased • Multiple imputation methods can be used
  • 22. Example – dealing with bias in cohorts • We wished to describe the risk of hepatotoxicity in patients treated with nevirapine (NVP) compared to those treated with efavirenz (EFV) • As NVP treatment has already been associated with an increased risk of hepatotoxicity, it is likely that patients with high baseline ALTs will be treated with an alternative drug • This may confound any relationships with outcome – we must ‘adjust’ for the baseline ALT in any analysis
  • 23. Is NVP associated with a higher rate of liver abnormalities than EFV? • Eligible patients: all ARV-naïve patients in UK CHIC who started treatment with either NVP (n=1785) or EFV (n=4338) from 1/1/2000 to 1/1/2006 (n=6123) • Data from patients receiving NVP+EFV (n=24) shown for comparison • Outcome variable: First ALT>200 IU after starting HAART
  • 24. Time to first ALT>200 IU among ARV- naïve patients starting EFV or NVP EFV NVP Probability of ALT >200 IU (%) Weeks after starting HAART
  • 25. Time to first ALT>200 IU among ARV- naïve patients starting EFV or NVP Estimate – EFV vs NVP Relative hazard 95% CI P-value Unadjusted 1.32 0.90-1.92 0.16
  • 26. Availability of baseline measurements Initial HAART regimen Baseline ALT measurements NVP EFV NVP+EFV P-value Any ALT prior to start of HAART 472 (26.4) 2066 (47.6) 20 (83.3) 0.0001 Median (IQR) baseline ALT 26 (18, 38) 29 (21, 45) 37 (24, 44) 0.0001 N (%) with baseline ALT >200 IU 0 (-) 27 (0.6) 0 (-) 0.004
  • 27. Estimate – EFV vs NVP Relative hazard 95% CI P-value Unadjusted 1.32 0.90-1.92 0.16 Adjusting for baseline ALT (including category for missing) 0.70 0.47-1.04 0.08 Time to first ALT>200 IU among ARV- naïve patients starting EFV or NVP
  • 28. Estimate – EFV vs NVP Relative hazard 95% CI P-value Unadjusted 1.32 0.90-1.92 0.16 Adjusting for baseline ALT (including category for missing) 0.70 0.47-1.04 0.08 Adjusting for baseline ALT (excluding those without values) 0.51 0.34-0.76 0.001 Time to first ALT>200 IU among ARV- naïve patients starting EFV or NVP
  • 29. Availability of follow-up measurements Initial HAART regimen Follow-up ALT measurements NVP EFV P-value Any ALT measurement in first year after starting HAART 511 (28.6) 2053 (47.3) 0.0001 ALT available at 48 weeks after starting HAART 250 (14.0) 937 (21.6) 0.0001 Median (IQR) ALT (IU) at 48 weeks 26 (18, 43) 26 (18, 40) 0.85
  • 30. Summary  If possible, should design studies to minimise the opportunities for bias  During analysis, must question whether bias may have been introduced at any stage (e.g. through loss-to-follow-up, missing data, differential follow-up, etc.)  Appropriate statistical methods may be used to minimise the impact of bias, but are unlikely to remove it fully