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of students using VGL
The Virtual Genetics Lab
Let’s see; pointy and short.
I wonder which is dominant.
Let’s try crossing two pointys.
All pointy offspring.
That doesn’t tell us anything!
Let’s try two shorts.
All short; still nothing good.
Let’s try short cross pointy.
All pointy; where’d the short go?
Pointy must be dominant!
These pointys must be heterozygous.
If we cross them, we should get 3:1.
Yahoo! That’s it!
A tale of two phenotypes…
(a dramatization)
With VGL, your students can:
• learn genetics concepts by discovery
• reinforce genetics concepts with inquiry
• develop and test hypotheses
• construct scientific arguments
• present and critique data
VGL problems are customizable:
• every problem is different (traits & genetic model)
• problem difficulty can be set by instructor
• simplest models are simple dominance
• more complex models include sex-linkage
• most challenging models include linkage & recombination
VGL is free and open-source:
• download from http://intro.bio.umb.edu/vgl/
• lab manuals and other materials free on-line
• videos and documentation also on-line
• written by Brian White (brian.white@umb.edu)
Students work with Cages of Simulated Organisms:
• deduce the underlying genetic model from data
• click to select two parents, then click CROSS
• offspring generated using genetic model
• optional practice mode shows model and genotypes
VGL is widely-used and well-tested:
• used with over 3000 college students since 2003
• used in many colleges and high schools
• used in US and internationally
• available in English, French, and Spanish
{Sample full-credit lab report produced by freshman undergraduate in General Biology I at UMass Boston}
Abstract
The genetic model is sex-linked (XX/XY) incomplete dominance. Three phenotypes are present: orange
eyes, blue eyes, and red eyes.
Introduction
The research question being addressed is how do we figure out if a model is sex-linked (XX/XY)
incomplete dominance. We can answer that question by crossing individual organisms and looking at the
offspring that they produce. This is effective because by doing this, we can tell which alleles are getting passed
to the offspring by looking at their phenotypes. We can also tell what the parents' and offspring's genotypes are
with enough crosses because the different phenotypes present in the offspring can tell us about simple
dominance or incomplete dominance. To determine if the model is sex-linked (XX/XY), we can look at the
number of males and females present in the offspring. If a few of the crosses show that males or females are
not present in the offspring, it can be determined that the model is sex-linked (XX/XY).
Materials and Methods
We did five crosses total. Three of these crosses were needed to figure out that the genetic model was
sex-linked and one was needed to figure out that it was incomplete dominance. Three crosses were needed to
figure out which genotype was heterozygous. No red eyed males were present in any of the models, so that was
the first indication that the model was sex-linked. Also, one of the crosses had no orange eyed females and two
of them had no blue eyed males. To figure out it was incomplete dominance, we crossed two different
phenotypes and got all three phenotypes in the offspring. To figure out which phenotype was heterozygous, we
needed to cross each of the phenotypes with themselves (we couldn't do that with the red eyed bugs though
since there were no red males) and then figure out which genotypes were homozygous. Then we needed to
cross two different phenotypes with each other to see which genotype was heterozygous.
Results and Discussion
The genetic model is sex-liked (XX/XY) with incomplete dominance.
allele contribution to phenotype
XD
XD
orange eyed female
Xd
Xd
blue eyed female
XD
Xd
red eyed female
XD
Y orange eyed male
Xd
Y blue eyed male
To prove that the model is sex-linked (XX/XY), there were no red eyed males in the model, showing
that it could not have been sex-linked (ZZ/ZW) since the males in that model would be the ones displaying all
phenotypes present and the females in that model would not be able to show all three phenotypes since it is
incomplete dominance and must be heterozygous for one of the traits. In the second cross that we did (an
orange eyed male x a red eyed female) we got four red eyed females, eleven orange eyed males, eight orange
eyed females, and seven blue eyed males. There were no blue eyed females present and no red eyed males
present. This showed that the model was sex-linked (XX/XY) since some males and some females were not
given.
To prove that the model is incomplete dominance, we crossed two orange eyed bugs and got all orange
eyed offspring. We did the same with blue eyed bugs and only got blue eyed offspring. This showed that those
two phenotypes didn't have heterozygous genotypes, since no other phenotype was present in the offspring.
However, when we crossed an orange eyed male with a red eyed female, all three phenotypes were present in
the offspring, proving that the red eyed genotype was heterozygous. The model could not have been simple
dominance since there three phenotypes present, and not just two.

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Handout

  • 1. Wordle made from transcripts of students using VGL The Virtual Genetics Lab Let’s see; pointy and short. I wonder which is dominant. Let’s try crossing two pointys. All pointy offspring. That doesn’t tell us anything! Let’s try two shorts. All short; still nothing good. Let’s try short cross pointy. All pointy; where’d the short go? Pointy must be dominant! These pointys must be heterozygous. If we cross them, we should get 3:1. Yahoo! That’s it! A tale of two phenotypes… (a dramatization) With VGL, your students can: • learn genetics concepts by discovery • reinforce genetics concepts with inquiry • develop and test hypotheses • construct scientific arguments • present and critique data VGL problems are customizable: • every problem is different (traits & genetic model) • problem difficulty can be set by instructor • simplest models are simple dominance • more complex models include sex-linkage • most challenging models include linkage & recombination VGL is free and open-source: • download from http://intro.bio.umb.edu/vgl/ • lab manuals and other materials free on-line • videos and documentation also on-line • written by Brian White (brian.white@umb.edu) Students work with Cages of Simulated Organisms: • deduce the underlying genetic model from data • click to select two parents, then click CROSS • offspring generated using genetic model • optional practice mode shows model and genotypes VGL is widely-used and well-tested: • used with over 3000 college students since 2003 • used in many colleges and high schools • used in US and internationally • available in English, French, and Spanish
  • 2. {Sample full-credit lab report produced by freshman undergraduate in General Biology I at UMass Boston} Abstract The genetic model is sex-linked (XX/XY) incomplete dominance. Three phenotypes are present: orange eyes, blue eyes, and red eyes. Introduction The research question being addressed is how do we figure out if a model is sex-linked (XX/XY) incomplete dominance. We can answer that question by crossing individual organisms and looking at the offspring that they produce. This is effective because by doing this, we can tell which alleles are getting passed to the offspring by looking at their phenotypes. We can also tell what the parents' and offspring's genotypes are with enough crosses because the different phenotypes present in the offspring can tell us about simple dominance or incomplete dominance. To determine if the model is sex-linked (XX/XY), we can look at the number of males and females present in the offspring. If a few of the crosses show that males or females are not present in the offspring, it can be determined that the model is sex-linked (XX/XY). Materials and Methods We did five crosses total. Three of these crosses were needed to figure out that the genetic model was sex-linked and one was needed to figure out that it was incomplete dominance. Three crosses were needed to figure out which genotype was heterozygous. No red eyed males were present in any of the models, so that was the first indication that the model was sex-linked. Also, one of the crosses had no orange eyed females and two of them had no blue eyed males. To figure out it was incomplete dominance, we crossed two different phenotypes and got all three phenotypes in the offspring. To figure out which phenotype was heterozygous, we needed to cross each of the phenotypes with themselves (we couldn't do that with the red eyed bugs though since there were no red males) and then figure out which genotypes were homozygous. Then we needed to cross two different phenotypes with each other to see which genotype was heterozygous. Results and Discussion The genetic model is sex-liked (XX/XY) with incomplete dominance. allele contribution to phenotype XD XD orange eyed female Xd Xd blue eyed female XD Xd red eyed female XD Y orange eyed male Xd Y blue eyed male To prove that the model is sex-linked (XX/XY), there were no red eyed males in the model, showing that it could not have been sex-linked (ZZ/ZW) since the males in that model would be the ones displaying all phenotypes present and the females in that model would not be able to show all three phenotypes since it is incomplete dominance and must be heterozygous for one of the traits. In the second cross that we did (an orange eyed male x a red eyed female) we got four red eyed females, eleven orange eyed males, eight orange eyed females, and seven blue eyed males. There were no blue eyed females present and no red eyed males present. This showed that the model was sex-linked (XX/XY) since some males and some females were not given. To prove that the model is incomplete dominance, we crossed two orange eyed bugs and got all orange eyed offspring. We did the same with blue eyed bugs and only got blue eyed offspring. This showed that those two phenotypes didn't have heterozygous genotypes, since no other phenotype was present in the offspring. However, when we crossed an orange eyed male with a red eyed female, all three phenotypes were present in the offspring, proving that the red eyed genotype was heterozygous. The model could not have been simple dominance since there three phenotypes present, and not just two.