SlideShare a Scribd company logo
1 of 4
Protein purification-Folin-Lowry assay
Introduction
There were two main aims to the purification; the first was to calculate the total protein concentration
of the cytoplasm fraction before and after ammonium sulphate precipitation, and the second was to
calculate the specific activity of progesterone
The goal of the investigation performed is protein purification which is a series of processes used to
isolate a single type of protein from a more complex mixture within an organ, tissue or cell. These
processes are fundamental for discovering the structure, function, characteristics and interactions of the
protein being investigated. The protein used was standard bovine albumin. At the end of the
purification the protein will be separated from the non protein and all other proteins.
There are many other procedures used in order to measure the concentration of the protein in solutions.
The most widely used is the Folin-Lowry protein assay which was employed in this investigation to
find the protein content in the standard bovine serum albumin and of the unknown.
The procedure depends upon two reactions. The first uses the buiret reagent, which contains potassium
hydroxide(KOH) and copper II sulphate(CuSO4)along with potassium sodium
tartarate(KNaC4H4O6.4H2O) when in the presence of a protein the blue reagent turns violet.
The colour change is caused by alkaline solutions when copper sulphate complex containing Cu2+
ions
form reduced Cu+
ions with the reduced amide bonds of the proteins. Due to the nature of the assay
showing poor sensitivity, a second reaction follows the first. This involves using Folin-Ciocalteu
reagent, which measures the amount of protein needed in order to inhibit the oxidation reagent. It is
composed of phosphomolybate and phosphotungstate. The reduced copper is used to reduce the Folin-
Ciocalteu reagent by tyrosine and tryptophan residues, which have become attached to copper. The
reduced reagent is blue in color hence detectable with a spectrophotometer set in the absorbance range
of 500 nm to 750nm. The reagent increases the sensitivity by approximately a hundred times, for
detecting reduced copper. The assay is only linear over a range of protein concentration from 0µg/ml to
200µg/ml.
Ammonium sulphate precipitation is a method that is considered to make proteins precipitate, or “salt
out” of solutions, which are collected by centrifugation. The protein is solvated, or surrounded by
water, meaning that their solubility can be redecreased at high levels of salt. This is due to salt
behaving as an interference and attracting the water to itself. As a result the protein can “salt out”.
However salt concentrations differ from protein to protein and in order for it to salt out therefore
requiring centrifugation. The process precipitates all proteins that have the same hydrophobicity but
purifies progesterone receptors with a high yield of 70% to 80% with a 20-30 fold.
Method
Materials
For this experiment the following equipment was used;
• Test tube rack
• Test tubes(x16)
• Spectrophotometer
• Gilson pipette-P1000
• Gilson pipette-P5000
• Cuvette
• Labels
• Beaker
• Stopwatch
The reagents used throughout the experiment were;
• Standard bovine serum albumin(200 µg/ml)- 10ml
• Solution A, Copper Sulphate (1%w/v)- 1ml
• Solution B, Potassium sodium tartarate(2%w/v)-1ml
• Solution C, Sodium Carbonate (2% in NaOH)- 100 ml
• Folin-Ciocalteu reagent-6 ml
• Unknown 1- 1ml
• Unknown 2- 1 ml
• Deionised water
Procedure
Firstly, the spectrophotometer was switched on and set to a absorbance of 755 nm and let to warm up.
Next, it was necessary to prepare a series of protein standard solutions in duplicate from 0-200µg/ml by
pipetting the required amount of bovine serum albumin standard into a test tube and making up the
volume to 1ml with water.
The two unknown solutions (1 and 2) provided then had to be diluted by a factor of 10 and a factor of
100. From the two diluted unknowns (1+2), 1ml of each of the diluted solutions (in duplicate) was
placed alongside the standard solutions.
Then the 1ml of each of the solutions (A) Copper sulphate (1%w/v) and (B) Potassium sodium tartrate
(2%w/v) were mixed in with 100ml of solution (C) Sodium carbonate (2%w/v in NaOH, 0.1M). Once
theses solutions were mixed, 5ml of this was added to each of the protein standards and the unknowns
at a 30 second intervals.
Afterwards, it was necessary to dilute the Folin-Ciocalteu reagent (6ml) by a factor of 2. Once the
solution was diluted, it was required to add 0.5ml of this solution to each of the test tubes at exactly 10
mins after the previous solution was added. Then the tubes were well shaken and left to stand for
exactly 30mins.
Finally the spectrophotometer was then used to read the optical density of each solution against one of
the blanks. The results obtained were then used to plot a standard graph of protein concentration
against absorbance. From the graph it was now possible to determine the protein concentrations of
Unknown 1 and Unknown 2.
Results
This section illustrates the data obtained or calculated throughout the investigation.
At the start of the experiment protein standards were produced by dilution of standard bovine serum
albumin stock solution with de ionised water. Table 1 shows the amount of deionised water used to
dilute a specific volume of the stock solution in order to achieve the relevnt concentrations, with a total
volume of 1mL each time.
Table 1
For each protein standard solution, and for each of the unknown solutions
STD
solutions(µg/ml)
0 40 80 120 160 200
STD volume(ml) 0 0.2 0.4 0.6 0.8 1
Volume of water
added(ml)
1 0.8 0.6 0.4 0.2 0
At their various concentrations, the spectrophotometer was used to determine their absorbance’s after
centrifugation shown below in table 2. the absorbance’s were determined for the duplicates, and an
average absorbance calculated.
Concentratio
n (µg/ml)
0 40 80 120 160 200 U1x10 U1x10
0
U2x1
0
U2x10
0
1 0 0.153 .277 .323 .433 .
459
1.857 .714 .360 .08
2 .001 .140 .268 .329 .413 .
461
1.949 .689 .358 .082
Average
absorbance
0.00
5
0.146
5
0.272
5
0.32
6
0.42
3
0.4
6
1.901
5
0.7015 0.359 0.81
Table 2.
The values from table 2 were used to draw a calibration graph with the use of Microsoft Excel. The
graph is shown below
A calibration graph to show the relationship between the average concentrations of each standard
protein solution agaiinst absorbance
y = 0.0023x + 0.0466
R
2
= 0.962
0
0.1
0.2
0.3
0.4
0.5
0.6
0 50 100 150 200 250
concentration(ug/ml)
absorbance
Using the equation of the line y=0.0023x+0.0466. The concentration of the unknowns
could be found to be and respectively. This was found using the following equation
(for unknown 1)
Discussion
Considering the results obtained, there is a positive linear relationship between the
absorbance as the concentration of protein standard increases. Also the R value shows
the degree of error is low. Anomalies in the results may have been caused by
contamination of samples while pippetting. To reduce error and increase reliability of
results the experiments could be done in triplicate.
The purification is considered useful if it causes an increase in the specific activity of
the protein to be purified

More Related Content

What's hot

Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...
Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...
Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...IOSR Journals
 
Colorimetric Sensor for Determination of Allura Red (E129) in Present of Pr...
Colorimetric Sensor for Determination of Allura   Red (E129) in Present of Pr...Colorimetric Sensor for Determination of Allura   Red (E129) in Present of Pr...
Colorimetric Sensor for Determination of Allura Red (E129) in Present of Pr...CrimsonpublishersNTNF
 
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...IOSR Journals
 
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIK
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIKB. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIK
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIKImran Nur Manik
 
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...Manik Ghosh
 
Lowry Protein Assay
Lowry Protein AssayLowry Protein Assay
Lowry Protein AssayKinza Irshad
 
Spectrophotometric methods for determoination of Proteins
Spectrophotometric methods for determoination of Proteins Spectrophotometric methods for determoination of Proteins
Spectrophotometric methods for determoination of Proteins Sabahat Ali
 
Result and Discussion_Dabur
Result and Discussion_DaburResult and Discussion_Dabur
Result and Discussion_DaburSonali Uttam
 
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...iosrphr_editor
 
Estimation of Serum Protien by Biuret method
Estimation of Serum Protien by Biuret methodEstimation of Serum Protien by Biuret method
Estimation of Serum Protien by Biuret methodDr. Almas A
 
Protein quantitation techniques
Protein quantitation techniquesProtein quantitation techniques
Protein quantitation techniquesGirish Kumar K
 
serum protein estimation
serum protein estimationserum protein estimation
serum protein estimationtonnybite
 
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...NITIN KANWALE
 
Development and validation of stability indicating RP-HPLC method for estimat...
Development and validation of stability indicating RP-HPLC method for estimat...Development and validation of stability indicating RP-HPLC method for estimat...
Development and validation of stability indicating RP-HPLC method for estimat...SriramNagarajan18
 
Comparative investigation of food supplements containing ascorbic acid Danka ...
Comparative investigation of food supplements containing ascorbic acid Danka ...Comparative investigation of food supplements containing ascorbic acid Danka ...
Comparative investigation of food supplements containing ascorbic acid Danka ...Georgi Daskalov
 

What's hot (20)

Protein analysis
Protein analysisProtein analysis
Protein analysis
 
Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...
Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...
Kinetic Spectrophotometric Determination of Drugs Based On Oxidation by Alkal...
 
Colorimetric Sensor for Determination of Allura Red (E129) in Present of Pr...
Colorimetric Sensor for Determination of Allura   Red (E129) in Present of Pr...Colorimetric Sensor for Determination of Allura   Red (E129) in Present of Pr...
Colorimetric Sensor for Determination of Allura Red (E129) in Present of Pr...
 
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...
Haemolysis effect of Mefenamic Acid 250 mg Capsule in Bio analysis by liquid ...
 
JJSA
JJSAJJSA
JJSA
 
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIK
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIKB. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIK
B. Pharm. (Honours) Part-III Practical, Pharmacology II,MANIK
 
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...
VALIDATED LIQUID CHROMATOGRAPHY/TANDEM MASS SPECTROMETRY METHOD FOR DETERMINA...
 
SITI AZIAH
SITI AZIAHSITI AZIAH
SITI AZIAH
 
Lowry Protein Assay
Lowry Protein AssayLowry Protein Assay
Lowry Protein Assay
 
Spectrophotometric methods for determoination of Proteins
Spectrophotometric methods for determoination of Proteins Spectrophotometric methods for determoination of Proteins
Spectrophotometric methods for determoination of Proteins
 
Result and Discussion_Dabur
Result and Discussion_DaburResult and Discussion_Dabur
Result and Discussion_Dabur
 
Flexible Automated Sample Prep Workflows
Flexible Automated Sample Prep WorkflowsFlexible Automated Sample Prep Workflows
Flexible Automated Sample Prep Workflows
 
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...
IOSR Journal of Pharmacy (IOSRPHR), www.iosrphr.org, call for paper, research...
 
Estimation of Serum Protien by Biuret method
Estimation of Serum Protien by Biuret methodEstimation of Serum Protien by Biuret method
Estimation of Serum Protien by Biuret method
 
Protein quantitation techniques
Protein quantitation techniquesProtein quantitation techniques
Protein quantitation techniques
 
serum protein estimation
serum protein estimationserum protein estimation
serum protein estimation
 
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...
SEMINAR ON RESEARCH PAPER “Formation Mechanism of monodisperse, LMW Chitosan ...
 
Development and validation of stability indicating RP-HPLC method for estimat...
Development and validation of stability indicating RP-HPLC method for estimat...Development and validation of stability indicating RP-HPLC method for estimat...
Development and validation of stability indicating RP-HPLC method for estimat...
 
Comparative investigation of food supplements containing ascorbic acid Danka ...
Comparative investigation of food supplements containing ascorbic acid Danka ...Comparative investigation of food supplements containing ascorbic acid Danka ...
Comparative investigation of food supplements containing ascorbic acid Danka ...
 
Obreshkova
ObreshkovaObreshkova
Obreshkova
 

Viewers also liked

Kebersihan kunci kesihatan
Kebersihan kunci kesihatanKebersihan kunci kesihatan
Kebersihan kunci kesihatannadiaidayu30
 
левицька г.р.виховна система класу
левицька г.р.виховна система класу левицька г.р.виховна система класу
левицька г.р.виховна система класу Halyna Levitska
 
Bab Majhul mudhori [Nahwu]
Bab Majhul mudhori [Nahwu]Bab Majhul mudhori [Nahwu]
Bab Majhul mudhori [Nahwu]Nurapriliad
 
левицька г.р.виховна система класу
левицька г.р.виховна система класу левицька г.р.виховна система класу
левицька г.р.виховна система класу Halyna Levitska
 
Marcella Marletta - Corso ICEP 2015
Marcella Marletta - Corso ICEP 2015Marcella Marletta - Corso ICEP 2015
Marcella Marletta - Corso ICEP 2015Marcella Marletta
 
basic of Image processing using matlab
basic of Image processing using matlabbasic of Image processing using matlab
basic of Image processing using matlabRohit Sinha
 
Globin Gene Analysis in a Ghanaian Population
Globin Gene Analysis in a Ghanaian PopulationGlobin Gene Analysis in a Ghanaian Population
Globin Gene Analysis in a Ghanaian PopulationSifuma Andrew Njenga
 
Marcella Marletta - Programma VIII Congresso Nazionale Sihta
Marcella Marletta - Programma VIII Congresso Nazionale SihtaMarcella Marletta - Programma VIII Congresso Nazionale Sihta
Marcella Marletta - Programma VIII Congresso Nazionale SihtaMarcella Marletta
 
Marcella Marletta - Congresso nazionale SIRM
Marcella Marletta - Congresso nazionale SIRMMarcella Marletta - Congresso nazionale SIRM
Marcella Marletta - Congresso nazionale SIRMMarcella Marletta
 
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMIL
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMILEksresi ginjal . debyNA XI BR 2 SMA INSAN KAMIL
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMILNurapriliad
 
ACCIDENT REPORTING SYSTEM USING MEMS
ACCIDENT REPORTING SYSTEM USING MEMS ACCIDENT REPORTING SYSTEM USING MEMS
ACCIDENT REPORTING SYSTEM USING MEMS Rohit Sinha
 
Виховна система класу
Виховна система класу Виховна система класу
Виховна система класу Halyna Levitska
 
Cell respiration and metabolism
Cell respiration and metabolismCell respiration and metabolism
Cell respiration and metabolismChy Yong
 
gsm based home automation
gsm based home automationgsm based home automation
gsm based home automationRohit Sinha
 
Principle and Applications Of MBTH, NQS, FC and BM Reagents
Principle and Applications Of MBTH, NQS, FC and BM ReagentsPrinciple and Applications Of MBTH, NQS, FC and BM Reagents
Principle and Applications Of MBTH, NQS, FC and BM ReagentsLakshmi Kalyani
 

Viewers also liked (20)

Kebersihan kunci kesihatan
Kebersihan kunci kesihatanKebersihan kunci kesihatan
Kebersihan kunci kesihatan
 
левицька г.р.виховна система класу
левицька г.р.виховна система класу левицька г.р.виховна система класу
левицька г.р.виховна система класу
 
calbah_engineering
calbah_engineeringcalbah_engineering
calbah_engineering
 
Bab Majhul mudhori [Nahwu]
Bab Majhul mudhori [Nahwu]Bab Majhul mudhori [Nahwu]
Bab Majhul mudhori [Nahwu]
 
BUEN ESPOSO
BUEN ESPOSOBUEN ESPOSO
BUEN ESPOSO
 
левицька г.р.виховна система класу
левицька г.р.виховна система класу левицька г.р.виховна система класу
левицька г.р.виховна система класу
 
Marcella Marletta - Corso ICEP 2015
Marcella Marletta - Corso ICEP 2015Marcella Marletta - Corso ICEP 2015
Marcella Marletta - Corso ICEP 2015
 
basic of Image processing using matlab
basic of Image processing using matlabbasic of Image processing using matlab
basic of Image processing using matlab
 
Globin Gene Analysis in a Ghanaian Population
Globin Gene Analysis in a Ghanaian PopulationGlobin Gene Analysis in a Ghanaian Population
Globin Gene Analysis in a Ghanaian Population
 
Marcella Marletta - Programma VIII Congresso Nazionale Sihta
Marcella Marletta - Programma VIII Congresso Nazionale SihtaMarcella Marletta - Programma VIII Congresso Nazionale Sihta
Marcella Marletta - Programma VIII Congresso Nazionale Sihta
 
Marcella Marletta - Congresso nazionale SIRM
Marcella Marletta - Congresso nazionale SIRMMarcella Marletta - Congresso nazionale SIRM
Marcella Marletta - Congresso nazionale SIRM
 
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMIL
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMILEksresi ginjal . debyNA XI BR 2 SMA INSAN KAMIL
Eksresi ginjal . debyNA XI BR 2 SMA INSAN KAMIL
 
ACCIDENT REPORTING SYSTEM USING MEMS
ACCIDENT REPORTING SYSTEM USING MEMS ACCIDENT REPORTING SYSTEM USING MEMS
ACCIDENT REPORTING SYSTEM USING MEMS
 
Glycolysis
GlycolysisGlycolysis
Glycolysis
 
Виховна система класу
Виховна система класу Виховна система класу
Виховна система класу
 
Glycolysis Pathway
Glycolysis Pathway Glycolysis Pathway
Glycolysis Pathway
 
Cell respiration and metabolism
Cell respiration and metabolismCell respiration and metabolism
Cell respiration and metabolism
 
gsm based home automation
gsm based home automationgsm based home automation
gsm based home automation
 
Browning reaction
Browning reaction Browning reaction
Browning reaction
 
Principle and Applications Of MBTH, NQS, FC and BM Reagents
Principle and Applications Of MBTH, NQS, FC and BM ReagentsPrinciple and Applications Of MBTH, NQS, FC and BM Reagents
Principle and Applications Of MBTH, NQS, FC and BM Reagents
 

Similar to Protein purification

Molecular biology (Practical) MANIK
Molecular biology (Practical) MANIKMolecular biology (Practical) MANIK
Molecular biology (Practical) MANIKImran Nur Manik
 
Determination of Total Protein Using the LAMBDA UV/Vis Spectrophotometer
Determination of Total Protein Using the LAMBDA UV/Vis SpectrophotometerDetermination of Total Protein Using the LAMBDA UV/Vis Spectrophotometer
Determination of Total Protein Using the LAMBDA UV/Vis SpectrophotometerPerkinElmer, Inc.
 
Chemical Tests - PDW final 2.11.2014
Chemical Tests - PDW final 2.11.2014Chemical Tests - PDW final 2.11.2014
Chemical Tests - PDW final 2.11.2014SATISH KUMAR
 
Bioassay 112070804012
Bioassay 112070804012Bioassay 112070804012
Bioassay 112070804012Patel Parth
 
Enzymatic Saccharification of Lignocellulosic Biomass
Enzymatic Saccharification of Lignocellulosic BiomassEnzymatic Saccharification of Lignocellulosic Biomass
Enzymatic Saccharification of Lignocellulosic BiomassBiorefineryEPC™
 
PREPERATION F CELL EXTRACT
PREPERATION F CELL EXTRACTPREPERATION F CELL EXTRACT
PREPERATION F CELL EXTRACTYashwanth B S
 
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...tomlewis981
 
Liraglutide in Diabetes
Liraglutide in Diabetes Liraglutide in Diabetes
Liraglutide in Diabetes SAKEEL AHMED
 
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence Detection
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence DetectionAnalysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence Detection
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence DetectionPerkinElmer, Inc.
 
Determination of Cholesterol Level in Human Serum
Determination of Cholesterol Level in Human SerumDetermination of Cholesterol Level in Human Serum
Determination of Cholesterol Level in Human SerumPerkinElmer, Inc.
 
Sumida Forsythe Pusey J Cryst Growth 232 2001 308
Sumida Forsythe Pusey J Cryst Growth 232 2001 308Sumida Forsythe Pusey J Cryst Growth 232 2001 308
Sumida Forsythe Pusey J Cryst Growth 232 2001 308jpsumida
 

Similar to Protein purification (20)

Molecular biology (Practical) MANIK
Molecular biology (Practical) MANIKMolecular biology (Practical) MANIK
Molecular biology (Practical) MANIK
 
Stages of Production of Escozine For Pets™
Stages of Production of Escozine For Pets™ Stages of Production of Escozine For Pets™
Stages of Production of Escozine For Pets™
 
final lab report
final lab reportfinal lab report
final lab report
 
Determination of Total Protein Using the LAMBDA UV/Vis Spectrophotometer
Determination of Total Protein Using the LAMBDA UV/Vis SpectrophotometerDetermination of Total Protein Using the LAMBDA UV/Vis Spectrophotometer
Determination of Total Protein Using the LAMBDA UV/Vis Spectrophotometer
 
Lowery’s Protein Quantification method.pptx
Lowery’s Protein Quantification method.pptxLowery’s Protein Quantification method.pptx
Lowery’s Protein Quantification method.pptx
 
Chemical Tests - PDW final 2.11.2014
Chemical Tests - PDW final 2.11.2014Chemical Tests - PDW final 2.11.2014
Chemical Tests - PDW final 2.11.2014
 
LIPOSOME.pptx
LIPOSOME.pptxLIPOSOME.pptx
LIPOSOME.pptx
 
Bioassay 112070804012
Bioassay 112070804012Bioassay 112070804012
Bioassay 112070804012
 
Enzymatic Saccharification of Lignocellulosic Biomass
Enzymatic Saccharification of Lignocellulosic BiomassEnzymatic Saccharification of Lignocellulosic Biomass
Enzymatic Saccharification of Lignocellulosic Biomass
 
Bilirubin
BilirubinBilirubin
Bilirubin
 
PREPERATION F CELL EXTRACT
PREPERATION F CELL EXTRACTPREPERATION F CELL EXTRACT
PREPERATION F CELL EXTRACT
 
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...
Analysis and Diagnosis of a clinical case using clinical, biochemical and ana...
 
15 Biochemistry _ Experiment
15 Biochemistry _ Experiment15 Biochemistry _ Experiment
15 Biochemistry _ Experiment
 
Liraglutide in Diabetes
Liraglutide in Diabetes Liraglutide in Diabetes
Liraglutide in Diabetes
 
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence Detection
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence DetectionAnalysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence Detection
Analysis of Aflatoxins in Pet Food by UHPLC Using PDA and Fluorescence Detection
 
Determination of Cholesterol Level in Human Serum
Determination of Cholesterol Level in Human SerumDetermination of Cholesterol Level in Human Serum
Determination of Cholesterol Level in Human Serum
 
Lab manual
Lab manualLab manual
Lab manual
 
Lecture 7
Lecture 7Lecture 7
Lecture 7
 
Sumida Forsythe Pusey J Cryst Growth 232 2001 308
Sumida Forsythe Pusey J Cryst Growth 232 2001 308Sumida Forsythe Pusey J Cryst Growth 232 2001 308
Sumida Forsythe Pusey J Cryst Growth 232 2001 308
 
Manojit Mandal OIST
Manojit Mandal OISTManojit Mandal OIST
Manojit Mandal OIST
 

Protein purification

  • 1. Protein purification-Folin-Lowry assay Introduction There were two main aims to the purification; the first was to calculate the total protein concentration of the cytoplasm fraction before and after ammonium sulphate precipitation, and the second was to calculate the specific activity of progesterone The goal of the investigation performed is protein purification which is a series of processes used to isolate a single type of protein from a more complex mixture within an organ, tissue or cell. These processes are fundamental for discovering the structure, function, characteristics and interactions of the protein being investigated. The protein used was standard bovine albumin. At the end of the purification the protein will be separated from the non protein and all other proteins. There are many other procedures used in order to measure the concentration of the protein in solutions. The most widely used is the Folin-Lowry protein assay which was employed in this investigation to find the protein content in the standard bovine serum albumin and of the unknown. The procedure depends upon two reactions. The first uses the buiret reagent, which contains potassium hydroxide(KOH) and copper II sulphate(CuSO4)along with potassium sodium tartarate(KNaC4H4O6.4H2O) when in the presence of a protein the blue reagent turns violet. The colour change is caused by alkaline solutions when copper sulphate complex containing Cu2+ ions form reduced Cu+ ions with the reduced amide bonds of the proteins. Due to the nature of the assay showing poor sensitivity, a second reaction follows the first. This involves using Folin-Ciocalteu reagent, which measures the amount of protein needed in order to inhibit the oxidation reagent. It is composed of phosphomolybate and phosphotungstate. The reduced copper is used to reduce the Folin- Ciocalteu reagent by tyrosine and tryptophan residues, which have become attached to copper. The reduced reagent is blue in color hence detectable with a spectrophotometer set in the absorbance range of 500 nm to 750nm. The reagent increases the sensitivity by approximately a hundred times, for detecting reduced copper. The assay is only linear over a range of protein concentration from 0µg/ml to 200µg/ml. Ammonium sulphate precipitation is a method that is considered to make proteins precipitate, or “salt out” of solutions, which are collected by centrifugation. The protein is solvated, or surrounded by water, meaning that their solubility can be redecreased at high levels of salt. This is due to salt behaving as an interference and attracting the water to itself. As a result the protein can “salt out”. However salt concentrations differ from protein to protein and in order for it to salt out therefore requiring centrifugation. The process precipitates all proteins that have the same hydrophobicity but purifies progesterone receptors with a high yield of 70% to 80% with a 20-30 fold. Method Materials For this experiment the following equipment was used; • Test tube rack • Test tubes(x16) • Spectrophotometer • Gilson pipette-P1000 • Gilson pipette-P5000 • Cuvette • Labels • Beaker • Stopwatch The reagents used throughout the experiment were;
  • 2. • Standard bovine serum albumin(200 µg/ml)- 10ml • Solution A, Copper Sulphate (1%w/v)- 1ml • Solution B, Potassium sodium tartarate(2%w/v)-1ml • Solution C, Sodium Carbonate (2% in NaOH)- 100 ml • Folin-Ciocalteu reagent-6 ml • Unknown 1- 1ml • Unknown 2- 1 ml • Deionised water Procedure Firstly, the spectrophotometer was switched on and set to a absorbance of 755 nm and let to warm up. Next, it was necessary to prepare a series of protein standard solutions in duplicate from 0-200µg/ml by pipetting the required amount of bovine serum albumin standard into a test tube and making up the volume to 1ml with water. The two unknown solutions (1 and 2) provided then had to be diluted by a factor of 10 and a factor of 100. From the two diluted unknowns (1+2), 1ml of each of the diluted solutions (in duplicate) was placed alongside the standard solutions. Then the 1ml of each of the solutions (A) Copper sulphate (1%w/v) and (B) Potassium sodium tartrate (2%w/v) were mixed in with 100ml of solution (C) Sodium carbonate (2%w/v in NaOH, 0.1M). Once theses solutions were mixed, 5ml of this was added to each of the protein standards and the unknowns at a 30 second intervals. Afterwards, it was necessary to dilute the Folin-Ciocalteu reagent (6ml) by a factor of 2. Once the solution was diluted, it was required to add 0.5ml of this solution to each of the test tubes at exactly 10 mins after the previous solution was added. Then the tubes were well shaken and left to stand for exactly 30mins. Finally the spectrophotometer was then used to read the optical density of each solution against one of the blanks. The results obtained were then used to plot a standard graph of protein concentration against absorbance. From the graph it was now possible to determine the protein concentrations of Unknown 1 and Unknown 2. Results This section illustrates the data obtained or calculated throughout the investigation. At the start of the experiment protein standards were produced by dilution of standard bovine serum albumin stock solution with de ionised water. Table 1 shows the amount of deionised water used to dilute a specific volume of the stock solution in order to achieve the relevnt concentrations, with a total volume of 1mL each time. Table 1 For each protein standard solution, and for each of the unknown solutions STD solutions(µg/ml) 0 40 80 120 160 200 STD volume(ml) 0 0.2 0.4 0.6 0.8 1 Volume of water added(ml) 1 0.8 0.6 0.4 0.2 0
  • 3. At their various concentrations, the spectrophotometer was used to determine their absorbance’s after centrifugation shown below in table 2. the absorbance’s were determined for the duplicates, and an average absorbance calculated. Concentratio n (µg/ml) 0 40 80 120 160 200 U1x10 U1x10 0 U2x1 0 U2x10 0 1 0 0.153 .277 .323 .433 . 459 1.857 .714 .360 .08 2 .001 .140 .268 .329 .413 . 461 1.949 .689 .358 .082 Average absorbance 0.00 5 0.146 5 0.272 5 0.32 6 0.42 3 0.4 6 1.901 5 0.7015 0.359 0.81 Table 2. The values from table 2 were used to draw a calibration graph with the use of Microsoft Excel. The graph is shown below A calibration graph to show the relationship between the average concentrations of each standard protein solution agaiinst absorbance y = 0.0023x + 0.0466 R 2 = 0.962 0 0.1 0.2 0.3 0.4 0.5 0.6 0 50 100 150 200 250 concentration(ug/ml) absorbance Using the equation of the line y=0.0023x+0.0466. The concentration of the unknowns could be found to be and respectively. This was found using the following equation (for unknown 1)
  • 4. Discussion Considering the results obtained, there is a positive linear relationship between the absorbance as the concentration of protein standard increases. Also the R value shows the degree of error is low. Anomalies in the results may have been caused by contamination of samples while pippetting. To reduce error and increase reliability of results the experiments could be done in triplicate. The purification is considered useful if it causes an increase in the specific activity of the protein to be purified