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Polymerase Chain Reaction
(PCR)
Mohammed Esawie, M.D., M.S.(c)
Background
• DNA amplification techniques produce
thousands or million copies of a particular
gene
• Either: In-vitro  PCR
In-vivo  Molecular Cloning
• In short: seek and find the gene  amplify it
PCR
• Definition??!
• Components:
1- Target DNA
2- Nucleotides
3- DNA polymerase
4- Primers
STEPS of PCR (Temperature)
- for one cycle
95 ◦c
(for one min.)
• Denaturation: to break hydrogen
bonds pairing the 2 DNA strands
55 ◦c
(for one min.)
• Annealing: the primers are allowed to
bind to DNA
72 ◦c
(for 3 min.)
• Extension: DNA polymerase makes use
of nucleotides to elongate the gene
STEPS of PCR (Temperature)
- for one cycle
PCR Cycles
If we begin with one copy of the gene
After (n) cycles: The number of copies = 2n
REAL TIME PCR (RT-PCR)
• For RNA
• One added step before PCR: Complementary
DNA (cDNA) by reverse transcriptase (RT)
enzyme
PCR Uses
• Diagnosis of infectious diseases:
Pathogens unable to grow in culture:
Ex: Hepatitis B virus (HBV), hepatitis C virus (HCV)
Pathogens slowly grow in culture:
Ex: Mycobacterium Tuberculosis
• Forensic Testing:
By amplification of DNA from a dried blood spot or
one hair follicle to trace the accused person
Image Credits
• www.yourgenome.org
• www.sciencelearn.org.nz
Thank You

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Polymerase chain reaction (PCR)

  • 2. Background • DNA amplification techniques produce thousands or million copies of a particular gene • Either: In-vitro  PCR In-vivo  Molecular Cloning • In short: seek and find the gene  amplify it
  • 3.
  • 4. PCR • Definition??! • Components: 1- Target DNA 2- Nucleotides 3- DNA polymerase 4- Primers
  • 5. STEPS of PCR (Temperature) - for one cycle 95 ◦c (for one min.) • Denaturation: to break hydrogen bonds pairing the 2 DNA strands 55 ◦c (for one min.) • Annealing: the primers are allowed to bind to DNA 72 ◦c (for 3 min.) • Extension: DNA polymerase makes use of nucleotides to elongate the gene
  • 6. STEPS of PCR (Temperature) - for one cycle
  • 7. PCR Cycles If we begin with one copy of the gene After (n) cycles: The number of copies = 2n
  • 8. REAL TIME PCR (RT-PCR) • For RNA • One added step before PCR: Complementary DNA (cDNA) by reverse transcriptase (RT) enzyme
  • 9.
  • 10. PCR Uses • Diagnosis of infectious diseases: Pathogens unable to grow in culture: Ex: Hepatitis B virus (HBV), hepatitis C virus (HCV) Pathogens slowly grow in culture: Ex: Mycobacterium Tuberculosis • Forensic Testing: By amplification of DNA from a dried blood spot or one hair follicle to trace the accused person
  • 11. Image Credits • www.yourgenome.org • www.sciencelearn.org.nz