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THE ADDITION OF BETA-SITE
AMYLOID PRECURSOR PROTEIN
CLEAVING ENZYME INHIBITORS TO
SLOW DOWN THE CREATION OF
BRAIN PLAQUES IN MICE WITH THE
ALZHEIMER’S DISEASE
Victor Esparza
Tayo Omoniyi
P.J. Rahimi
Alexis Sleeper
Marvin Thomas, Jr.
There are about 5.2 million people in the
United States with the Alzheimer’s
Disease, which includes about 5 million
over the age of 65 and approximately
200,000 people under the age of 65. This
number is expected to increase to about
16 million by the year 2050.
Background
Alzheimer’s Disease is a degenerative
brain disease that occurs in people
usually over the age of 65. This disease is
caused by plaques in the brain that
makes the communication between
nerve cells difficult. This is the reason why
people with Alzheimer’s start forgetting
things.
Alzheimer’s Disease
Plaques in the brain are created by a cluster of
protein pieces. This protein is called Amyloid-beta
(sometimes called Beta-amyloid), which is
created when the BACE is cleaved. These protein
pieces clump together and block cell-to-cell
signaling at synapses. The blocking of signaling
leads to a slow, but constant and consistent cell
death which starts affecting memory and
shrinking the brain, and eventually leads to death.
Alzheimer’s in Depth
Healthy Nerve Cell
Nerve Cell with Plaque
References
& Questions
Explanation of how we plan to conduct our
project
Results, Expected Outcomes, and Potential
Problems and Remedies are explained
Our Project
Explanation of the project
Explanation of our resources used, timeline,
and budget
A listing of our references used and a Q&A
with us
Objective
Methods
Results and
E.O.
Resources
The objective of our project is to add
inhibitors to limit the production of the
Beta-site APP-Cleaving Enzyme (BACE),
the enzyme that creates the Amyloid-
beta protein which, in an amount that is
vast compared to a normal person,
creates the plaques in the brain that is
associated with the Alzheimer’s Disease.
Objective
We will have four main groups of mice
split into four subgroups each with 25
mice for a total of 100 wild-type mice
and 300 transgenic mice. The transgenic
mice are genetically altered to have the
Alzheimer’s Disease.
Methods
Mice weigh around 300 milligrams and the max
dosage of a substance you can inject into a
mouse is 1/30th of their body weight, which is 10
mg. In order to test its maximum effectiveness,
we will administer different dosages of the
inhibitor starting with a 2 mg dosage, then a 5
mg dosage, and the maximum 10 mg dosage of
the Beta-secretase inhibitor.
Methods Cont.
Group 1 will be our control mice which do not have
Alzheimer’s Disease. Subgroup A, consisting of 25 mice, will
not receive a dosage of the Beta-secretase inhibitor.
Subgroup B will receive the minimum of 2 mg dosage.
Subgroup C will receive the 5 mg dosage and then
subgroup D will receive the 10 mg dosage. Giving the
inhibitor to the control group allows us to see its effects on
normal mice. In theory, the normal mice should also have a
decrease in Beta-secretase production, therefore
confirming the legitimacy of the decrease of beta-amyloid
in mice with Alzheimer’s disease.
Group 1 of Mice (Control/Wild-Type)
The second group of mice will be divided up much like the
control group. Group 2 will consist of 100 mice split into the 4
subgroups of 25 mice. These mice will have been mutated with
the Alzheimer’s disease and will be tested four months after they
have been given the disease. Since it takes around six months for
the mice to form plaque on the neurons, we will be testing group
2 to see whether or not the inhibitor can be used as a preventive
measure during the onset of the disease to keep the plaques from
forming, therefore saving neurons. Similar to group 1, subgroup A
will be given no Beta-secretase inhibitor, subgroup B will receive
the 2 mg dosage, subgroup C will receive the 5 mg dosage, and
subgroup D will receive the full 10 mg dosage.
Group 2
The third and fourth groups of mice will follow the same
patterns as before. These mice will be mutated with
Alzheimer’s Disease and will be tested eight and
twelve months, respectively, after mutation. These
mice should show already formed plaques of Amyloid-
beta on their neurons and will have an excess of Beta-
secretase in their brain. These two group will be used
to show if the inhibitor can be used to slow down the
progression of Alzheimer’s in mice whose progression is
further along than the other.
Groups 3 and 4
In order to test the effectiveness of the Beta-
secretase inhibitor, we have devised a series of
tests that target the effects of the Beta-amyloid
plaques. We will be testing their
learning/memory abilities by administering the
Morris Water Maze Test, cerebrospinal fluid for
Amyloid-beta levels, and motor coordination.
There will be a five day trial of all the tests two
weeks before and after the injection.
Testing the Effectiveness of the
Inhibitor
We expect the Amyloid-beta to decrease, but not fully go away. Mice that
initially have plaques are likely to not develop a further aggregation of these
plaques. Administration of the compound on mice that are predisposed to
developing plaques, but have not yet developed them, are likely to never
develop plaques or have a significantly small amount of buildup. In the
learning and memory tests, we expect mice who have not yet developed
the plaques to perform nearly as well as the control mice and the mice who
have developed the plaques to perform better than they did in the initial
trials prior to injection. The mice’s cerebrospinal fluid tests should also show a
decrease in the amount of Amyloid-beta potency in the second round of
testing as plaques should be forming at a slower rate or, even better, not
forming whatsoever. We also can expect improved motor coordination if the
inhibitor indeed decreases the protein production in the brain. Overall, the
Beta-secretase inhibitor should improve cognitive function since less neurons
are dying and the amount of plaques are decreasing.
Results
We expect to find a significant decrease in BACE without
completely eliminating it. The plaque in the brains of the
mice should reduce significantly as a result. Overall, the
mice who had plaque before administering the inhibitors
should have improved motor control and memory once the
inhibitor is administered. We would expect them to show
improved results during the second trials of tests. We do not
expect the transgenic mice to perform as well as the wild-
type mice during the tests, but we expect them to perform
close to the wild-type mice after administering the inhibitor.
Expected Outcomes
Studies show that the deletion of all the Beta-secretase to
stop Amyloid-beta production had only a minor impact on
the mice. This shows that eventually, it will lead to a
problem. Only a partial reduction of production of Amyloid-
beta should be taken to allow for better results. Reports
demonstrate that just a partial reduction and a little less
than fifty percent of the brain plaque have showed
significant improvements with the mice. These reports
conclude that these symptoms can be improved in spite of
the leftover Amyloid-beta production.
Potential Problems
Resources, Timeline, Budget
Budget
• Lab: $100,000
• Mice: $7,200
• Mice Necessities: $20,000
• Equipment: $150,000
• Employees ($30,000/employee): $300,000
• BACE Inhibitor: $680,000
• Miscellaneous: $17,800
Total: $1,275,000
• It will take about 15 months to complete experiment and
gather data.
• Ahmed, R., Holler, C., Webb, R., Li, F., Beckett, T., & Murphy, M. P. (2010). BACE1 and BACE2 enzymatic activities in Alzheimer's disease. Journal of Neurochemistry, 112(4), 1045-1053.
• Alzheimer's Disease - Questions and Answers. (2014, September 23). In Texas Department of State Health Services. Retrieved November 23, 2014, from
https://www.dshs.state.tx.us/alzheimers/qanda.shtm
• Andreasen, N., Hesse, C., Davidsson, P., Minthon, L., Wallin, A., Winblad, B., . . . Blennow, K. (1999). Cerebrospinal Fluid ß-Amyloid(1-42) in Alzheimer Disease: Differences Between Early-
and Late-Onset Alzheimer Disease and Stability During the Course of Disease. JAMA Neurology, 56(6), 673-680. doi:10.1001/archneur.56.6.673
• BACE2 Gene. (2014, May 7). In GeneCards: The Human Gene Compendium. Retrieved November 26, 2014, from Weizmann Institute of Science website: http://www.genecards.org/cgi-
bin/carddisp.pl?gene=BACE2
• Beta-Secretase Inhibitor IV. (n.d.). In Santa Cruz Biotechnology. Retrieved November 30, 2014, from Santa Cruz Biotechnology, Inc. website: http://www.scbt.com/datasheet-222304--
secretase-inhibitor-iv.html
• Brain Tour. (2011). In Alzheimer's Association. Retrieved November 30, 2014, from Alzheimer's Association website: http://www.alz.org/braintour/alzheimers_changes.asp
• Chen, Y., Hwang, X., Zhang, Y., Rockenstein, E., Bu, G., Golde, T., . . . Xu, H. (2012). Alzheimer’s ß-Secretase (BACE1) Regulates the cAMP/PKA/CREB Pathway Independently of ß-
Amyloid. The Journal of Neuroscience, 32(33), 11390-11395. Retrieved from http://www.jneurosci.org/content/32/33/11390.full.pdf+html
• Duyckaerts, C., Potier, M., & Delatour, B. (2008). Alzheimer disease models and human neuropathology: similarities and differences. Acta Neuropathologica, 115(1), 5-38.
doi:10.1007/s00401-007-0312-8
• Evin, G., & Kenche, V. (2007). BACE Inhibitors as Potential Therapeutics for Alzheimers disease [Abstract]. Recent Patents on CNS Drug Discovery, 2(3), 188-199.
doi:10.2174/157488907782411783
• Experimental Alzheimer Drugs Targeting Beta-Amyloid and the “Amyloid Hypothesis”. (2008, June). In Alzheimer's Association. Retrieved November 26, 2014, from Alzheimer's Association
website: http://www.alz.org/national/documents/topicsheet_betaamyloid.pdf
• Forster, M., Dubey, A., Dawson, K., Stutts, W., Lul, H., & Sohal, R. (1996). Age-related losses of cognitive function and motor skills in mice are associated with oxidative protein damage in
the brain. Proceedings of the National Academy of Sciences of the United States, 93(10), 4765-4769.
• Ghosh, A., Brindisi, M., & Tang, J. (2011). Developing ß-secretase inhibitors for treatment of Alzheimer’s disease. Journal of Neurochemistry, 120(1), 71-83. doi:10.1111/j.1471-
4159.2011.07476.x
• Menting, K., & Claassen, J. (2014). ß-secretase inhibitor; a promising novel therapeutic drug in Alzheimer’s disease. Frontiers in Aging Neuroscience, 6(165), 1-9.
doi:10.3389/fnagi.2014.00165
• Tang, J., & Ghosh, A. (2011). Treating transgenic Alzheimer mice with a ß-secretase inhibitor, what have we learned? AGING, 3(1), 14-16.
• Vorhees, C., & Williams, M. (2006). Morris water maze: procedures for assessing spatial and related forms of learning and memory. Nature Protocols, 1(2), 848-858.
doi:10.1038/nprot.2006.116
References
Questions?

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MoM PowerPoint

  • 1. THE ADDITION OF BETA-SITE AMYLOID PRECURSOR PROTEIN CLEAVING ENZYME INHIBITORS TO SLOW DOWN THE CREATION OF BRAIN PLAQUES IN MICE WITH THE ALZHEIMER’S DISEASE Victor Esparza Tayo Omoniyi P.J. Rahimi Alexis Sleeper Marvin Thomas, Jr.
  • 2. There are about 5.2 million people in the United States with the Alzheimer’s Disease, which includes about 5 million over the age of 65 and approximately 200,000 people under the age of 65. This number is expected to increase to about 16 million by the year 2050. Background
  • 3. Alzheimer’s Disease is a degenerative brain disease that occurs in people usually over the age of 65. This disease is caused by plaques in the brain that makes the communication between nerve cells difficult. This is the reason why people with Alzheimer’s start forgetting things. Alzheimer’s Disease
  • 4. Plaques in the brain are created by a cluster of protein pieces. This protein is called Amyloid-beta (sometimes called Beta-amyloid), which is created when the BACE is cleaved. These protein pieces clump together and block cell-to-cell signaling at synapses. The blocking of signaling leads to a slow, but constant and consistent cell death which starts affecting memory and shrinking the brain, and eventually leads to death. Alzheimer’s in Depth
  • 7. References & Questions Explanation of how we plan to conduct our project Results, Expected Outcomes, and Potential Problems and Remedies are explained Our Project Explanation of the project Explanation of our resources used, timeline, and budget A listing of our references used and a Q&A with us Objective Methods Results and E.O. Resources
  • 8. The objective of our project is to add inhibitors to limit the production of the Beta-site APP-Cleaving Enzyme (BACE), the enzyme that creates the Amyloid- beta protein which, in an amount that is vast compared to a normal person, creates the plaques in the brain that is associated with the Alzheimer’s Disease. Objective
  • 9. We will have four main groups of mice split into four subgroups each with 25 mice for a total of 100 wild-type mice and 300 transgenic mice. The transgenic mice are genetically altered to have the Alzheimer’s Disease. Methods
  • 10. Mice weigh around 300 milligrams and the max dosage of a substance you can inject into a mouse is 1/30th of their body weight, which is 10 mg. In order to test its maximum effectiveness, we will administer different dosages of the inhibitor starting with a 2 mg dosage, then a 5 mg dosage, and the maximum 10 mg dosage of the Beta-secretase inhibitor. Methods Cont.
  • 11. Group 1 will be our control mice which do not have Alzheimer’s Disease. Subgroup A, consisting of 25 mice, will not receive a dosage of the Beta-secretase inhibitor. Subgroup B will receive the minimum of 2 mg dosage. Subgroup C will receive the 5 mg dosage and then subgroup D will receive the 10 mg dosage. Giving the inhibitor to the control group allows us to see its effects on normal mice. In theory, the normal mice should also have a decrease in Beta-secretase production, therefore confirming the legitimacy of the decrease of beta-amyloid in mice with Alzheimer’s disease. Group 1 of Mice (Control/Wild-Type)
  • 12. The second group of mice will be divided up much like the control group. Group 2 will consist of 100 mice split into the 4 subgroups of 25 mice. These mice will have been mutated with the Alzheimer’s disease and will be tested four months after they have been given the disease. Since it takes around six months for the mice to form plaque on the neurons, we will be testing group 2 to see whether or not the inhibitor can be used as a preventive measure during the onset of the disease to keep the plaques from forming, therefore saving neurons. Similar to group 1, subgroup A will be given no Beta-secretase inhibitor, subgroup B will receive the 2 mg dosage, subgroup C will receive the 5 mg dosage, and subgroup D will receive the full 10 mg dosage. Group 2
  • 13. The third and fourth groups of mice will follow the same patterns as before. These mice will be mutated with Alzheimer’s Disease and will be tested eight and twelve months, respectively, after mutation. These mice should show already formed plaques of Amyloid- beta on their neurons and will have an excess of Beta- secretase in their brain. These two group will be used to show if the inhibitor can be used to slow down the progression of Alzheimer’s in mice whose progression is further along than the other. Groups 3 and 4
  • 14. In order to test the effectiveness of the Beta- secretase inhibitor, we have devised a series of tests that target the effects of the Beta-amyloid plaques. We will be testing their learning/memory abilities by administering the Morris Water Maze Test, cerebrospinal fluid for Amyloid-beta levels, and motor coordination. There will be a five day trial of all the tests two weeks before and after the injection. Testing the Effectiveness of the Inhibitor
  • 15. We expect the Amyloid-beta to decrease, but not fully go away. Mice that initially have plaques are likely to not develop a further aggregation of these plaques. Administration of the compound on mice that are predisposed to developing plaques, but have not yet developed them, are likely to never develop plaques or have a significantly small amount of buildup. In the learning and memory tests, we expect mice who have not yet developed the plaques to perform nearly as well as the control mice and the mice who have developed the plaques to perform better than they did in the initial trials prior to injection. The mice’s cerebrospinal fluid tests should also show a decrease in the amount of Amyloid-beta potency in the second round of testing as plaques should be forming at a slower rate or, even better, not forming whatsoever. We also can expect improved motor coordination if the inhibitor indeed decreases the protein production in the brain. Overall, the Beta-secretase inhibitor should improve cognitive function since less neurons are dying and the amount of plaques are decreasing. Results
  • 16. We expect to find a significant decrease in BACE without completely eliminating it. The plaque in the brains of the mice should reduce significantly as a result. Overall, the mice who had plaque before administering the inhibitors should have improved motor control and memory once the inhibitor is administered. We would expect them to show improved results during the second trials of tests. We do not expect the transgenic mice to perform as well as the wild- type mice during the tests, but we expect them to perform close to the wild-type mice after administering the inhibitor. Expected Outcomes
  • 17. Studies show that the deletion of all the Beta-secretase to stop Amyloid-beta production had only a minor impact on the mice. This shows that eventually, it will lead to a problem. Only a partial reduction of production of Amyloid- beta should be taken to allow for better results. Reports demonstrate that just a partial reduction and a little less than fifty percent of the brain plaque have showed significant improvements with the mice. These reports conclude that these symptoms can be improved in spite of the leftover Amyloid-beta production. Potential Problems
  • 18. Resources, Timeline, Budget Budget • Lab: $100,000 • Mice: $7,200 • Mice Necessities: $20,000 • Equipment: $150,000 • Employees ($30,000/employee): $300,000 • BACE Inhibitor: $680,000 • Miscellaneous: $17,800 Total: $1,275,000 • It will take about 15 months to complete experiment and gather data.
  • 19. • Ahmed, R., Holler, C., Webb, R., Li, F., Beckett, T., & Murphy, M. P. (2010). BACE1 and BACE2 enzymatic activities in Alzheimer's disease. Journal of Neurochemistry, 112(4), 1045-1053. • Alzheimer's Disease - Questions and Answers. (2014, September 23). In Texas Department of State Health Services. Retrieved November 23, 2014, from https://www.dshs.state.tx.us/alzheimers/qanda.shtm • Andreasen, N., Hesse, C., Davidsson, P., Minthon, L., Wallin, A., Winblad, B., . . . Blennow, K. (1999). Cerebrospinal Fluid ß-Amyloid(1-42) in Alzheimer Disease: Differences Between Early- and Late-Onset Alzheimer Disease and Stability During the Course of Disease. JAMA Neurology, 56(6), 673-680. doi:10.1001/archneur.56.6.673 • BACE2 Gene. (2014, May 7). In GeneCards: The Human Gene Compendium. Retrieved November 26, 2014, from Weizmann Institute of Science website: http://www.genecards.org/cgi- bin/carddisp.pl?gene=BACE2 • Beta-Secretase Inhibitor IV. (n.d.). In Santa Cruz Biotechnology. Retrieved November 30, 2014, from Santa Cruz Biotechnology, Inc. website: http://www.scbt.com/datasheet-222304-- secretase-inhibitor-iv.html • Brain Tour. (2011). In Alzheimer's Association. Retrieved November 30, 2014, from Alzheimer's Association website: http://www.alz.org/braintour/alzheimers_changes.asp • Chen, Y., Hwang, X., Zhang, Y., Rockenstein, E., Bu, G., Golde, T., . . . Xu, H. (2012). Alzheimer’s ß-Secretase (BACE1) Regulates the cAMP/PKA/CREB Pathway Independently of ß- Amyloid. The Journal of Neuroscience, 32(33), 11390-11395. Retrieved from http://www.jneurosci.org/content/32/33/11390.full.pdf+html • Duyckaerts, C., Potier, M., & Delatour, B. (2008). Alzheimer disease models and human neuropathology: similarities and differences. Acta Neuropathologica, 115(1), 5-38. doi:10.1007/s00401-007-0312-8 • Evin, G., & Kenche, V. (2007). BACE Inhibitors as Potential Therapeutics for Alzheimers disease [Abstract]. Recent Patents on CNS Drug Discovery, 2(3), 188-199. doi:10.2174/157488907782411783 • Experimental Alzheimer Drugs Targeting Beta-Amyloid and the “Amyloid Hypothesis”. (2008, June). In Alzheimer's Association. Retrieved November 26, 2014, from Alzheimer's Association website: http://www.alz.org/national/documents/topicsheet_betaamyloid.pdf • Forster, M., Dubey, A., Dawson, K., Stutts, W., Lul, H., & Sohal, R. (1996). Age-related losses of cognitive function and motor skills in mice are associated with oxidative protein damage in the brain. Proceedings of the National Academy of Sciences of the United States, 93(10), 4765-4769. • Ghosh, A., Brindisi, M., & Tang, J. (2011). Developing ß-secretase inhibitors for treatment of Alzheimer’s disease. Journal of Neurochemistry, 120(1), 71-83. doi:10.1111/j.1471- 4159.2011.07476.x • Menting, K., & Claassen, J. (2014). ß-secretase inhibitor; a promising novel therapeutic drug in Alzheimer’s disease. Frontiers in Aging Neuroscience, 6(165), 1-9. doi:10.3389/fnagi.2014.00165 • Tang, J., & Ghosh, A. (2011). Treating transgenic Alzheimer mice with a ß-secretase inhibitor, what have we learned? AGING, 3(1), 14-16. • Vorhees, C., & Williams, M. (2006). Morris water maze: procedures for assessing spatial and related forms of learning and memory. Nature Protocols, 1(2), 848-858. doi:10.1038/nprot.2006.116 References