II-SDV 2015, 20 - 21 April, in Nice

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Dr. Haxel Consult

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Linguamatics Update
Phil Hastings
II-SDV
Nice, 20th April 2015

• Agile, scalable, real-time NLP-based text mining
• Fact extraction and knowledge synthesis
About Linguamatics
Copyright © Linguamatics 20152
Pharma/Biotech GovernmentHealthcare
Including 17 of
the top 20
Including
FDA
Including Kaiser
Permanente
Software Hosted contentConsulting
Boston, USA
Cambridge, UK

Toolbox of Methods for Powerful Querying
Copyright © Linguamatics 2015
•Precise linguistic relationships, sentence co-occurrence
•Precise negation e.g. “pressure” but not “blood
pressure”
NLP
•Search for concepts and classes, not just keywords
•e.g. cancer and get synonyms and children:
• Malignant neoplasms, Malignant tumor …
Terminologies
•Rule based pattern matching for e.g. measurements,
lab codes, mutations
•e.g. microRNA: let-?d+.* mirn?a?-?d+.*
Regular
Expressions
Chemistry
•Restrict within particular regions of a document, including
nested e.g. table cell in table in DescriptionFielded Search
•Simultaneous processing of large numbers of items e.g.
• 500 compounds, 500 genes from microarray
experiment, etc.
High Throughput
3

What’s New?
I2E
Connected
Data
Technology
Improved
output controls
New
Integrated
Visualisation
Advanced
Table
Processing
Improvements
for Real Time
Monitoring
Improved
Access Control
Copyright © Linguamatics 20154

Connected Data Technology
Copyright © Linguamatics 20155
Federated Text Mining
Single Query over Multiple Data Sources and Network Locations

Connected Data Technology
Copyright © Linguamatics 20156
Unified results for fast review and discovery of
relationships across data sources

I2E Visualization
Copyright © Linguamatics 20157

Meeting the Big Data Challenge
High performance indexing
• Millions of documents, TBs of storage
• Ontologies with 100,000s of terms
• Handles large documents with ease
• Open, configurable pipeline
• Advanced table processing
VOLUME VARIETY VELOCITY VISUALIZATION
Connected data technology
• Unified heterogeneous document types across federated servers
• Connect – Normalize – Use
• Structured, semi-structured and unstructured
Distributed indexing and querying
• Multi-processor
• Multi-machine
Integrates in enterprise applications, portals, pipelines and workflows
• Open web services API
• Public query language
High-throughput single document processing (AMP)
• For semantic enrichment and ETL
• Public query language
Strong integrated visualization
Copyright © Linguamatics 20158

Thank You
Useful Links:
Web: www.linguamatics.com
Twitter: www.twitter.com/linguamatics
LinkedIn: www.linkedin.com/company/linguamatics
Facebook: www.facebook.com/Linguamatics
YouTube: https://www.youtube.com/Linguamatics
Blogs: https://linguamatics.wordpress.com/
http://www.linguamaticshealth.com/blog
Contact:
Phil Hastings
Email: phil.hastings@linguamatics.com
Tel: +44 (0)1223 651910
Copyright © Linguamatics 20159

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