Description about Oxidative phosphorylation

1. OXIDATIVE PHOSPHORYLATION
DIPAK KUMAR SINGHA
ASST. PROFESSOR
CALCUTTA INSTITUTE OF
PHARMACEUTICAL TECHNOLOGY &
AHS
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2. BIOLOGICAL OXIDATION and OXIDATIVE
PHOSPHORYLATION
The students must be able to answer questions on the
following topics:
➢ Stages of Oxidation of Foodstuffs
➢ Redox potentials
➢ Biological oxidation
➢ Enzymes and co-enzymes involved biological oxidation
➢ High energy compounds
➢ Organization of electron transport chain
➢ Oxidative Phosphorylation
➢ Chemiosmotic theory
➢ Proton pump
➢ ATP synthesis
➢ Inhibitors of ATP synthesis

3. Biological Oxidation
• The transfer of electrons from the reduced co-enzymes through the
respiratory chain to oxygen is known as biological oxidation.

4. OXIDATIVE PHOSPHORYLATION
Energy released during this process is trapped as ATP. This
coupling of oxidation with Phosphorylation is called oxidative
Phosphorylation. In the body, this oxidation is carried out by
successive steps of dehydrogenations.
The transport of electrons through the ETC is linked with the
release of free energy. The process of synthesizing ATP from
ADP and Pi coupled with the electron transport chain is
known as oxidative phosphorylation. The complex V of the
inner mitochondrial membrane is the site of oxidative
phosphorylation.

5. Energetics of Oxidative Phosphorylation
The E0 ‫׳‬and G0 ‫׳‬of biological oxidation may be calculated
as follows: ½ O2 + 2H+ → H2O (E‫׳‬ 0 = + 0.82)
NAD+ + H+ + 2e → NADH (E‫׳‬ 0 = – 0.32)
When these two equations are computed;
½ O2 + NADH + H+ → H2O + NAD+ (E‫׳‬ 0 = 1.14 V)
ΔG0 ‫׳‬
=
– nF E‫׳‬ 0 = –2 × 23.06 × 1.14 = –52.6 kcal/mol
The free energy change between NAD+ and water is equal to 53
kcal/mol. This is so great that, if this much energy is released
at one stretch, body cannot utilize it. Hence, with the help of
ETC assembly, the total energy change is released in small
increments so that energy can be trapped as chemical bond
energy, ATP (Fig.20.2).

7. P : O Ratio
The P : O ratio refers to the number of inorganic phosphate
molecules utilized for ATP generation for every atom of oxygen
consumed. More appropriately, P : O ratio represents the
number of molecules of ATP synthesized per pair of electrons
carried through ETC.
The mitochondrial oxidation of NADH with a P : O ratio of 3 can
be represented by the following equation :
NADH + H+ +1/2O2 + 3ADP+ 3Pi------ NAD+ +3ATP+4H2O
• P : O ratio of 2 is assigned to the oxidation of FADH2. (Note :
Although yet to be proved beyond doubt, some workers
suggest a P : O ratio of 2.5 for NADH + H+, and 1.5 for FADH2,
• based on the proton translocation)

8. P : O Ratio
The P:O ratio is defined as the number of inorganic phosphate molecules
incorporated into ATP for every atom of oxygen consumed. When a pair of
electrons from NADH reduces an atom of oxygen (½ O2), 2.5 mol of ATP
are formed per 0.5 mol of O2 consumed. In other words, the P:O ratio of
NADH oxidation is 2.5; The P:O value of FADH2 is 1.5.

9. Sites of ATP Synthesis phosphorylation in ETC
There are three reactions in the ETC that are exergonic to result in the
synthesis of 3 ATP molecules three sites of ATP formation in ETC are
1. Oxidation of FMNH2 by coenzyme Q.
2. Oxidation of cytochrome b by cytochrome c1 .
3. Cytochrome oxidase reaction.
Each one of the above reactions representsa coupling site tor ATP
production. There are only two coupling sites for the oxidation of
FADH2 (P : O ratio 2), since the first site is bypassed

10. Sites of ATP Synthesis
raditionally, the sites of ATP synthesis are marked, as site 1, 2 and 3, as
shown in Figure 20.13. But now it is known that ATP synthesis actually
occurs when the proton gradient is dissipated, and not when the protons
are pumped out (Fig. 20.15).
Fig. 20.15: Summary of ATP synthesis. One mitochondrion is depicted, with inner and outer
memberanes. ETC complexes will push hydrogen ions from matrix into the intermembrane space. So,
intermediate space has more H+ (highly acidic) than matrix. So, hydrogen ions tend
to leak into matrix through Fo. Then ATPs are synthesized. I, II, III, IV = components of ETC

11. Energetics of oxidative phosphorylation
The transport of electrons from redox pair NAD+/NADH (Eo = - 0.32) to finally the
redox pair
|OrlflzO (Eo = + 0.82) may be simplified and representedin the following equation
to, * NADu + H* ----+ H2o + NAD+
The redox potential difference between these two redoxp ai rsi s 1.14 V, which is
equivalentto an energy 52 Cal/mol.
Three ATP are svnthesizedi n the ETC when NADH is oxidized which equals to 21.9 Cal
(each ATP = 7.3 Cal).
The efficiency of energy conservation is calculated as 21.9x100 = 42%to52%
Therefore, when NADH is oxidized, about 42'/. of energy is trapped in the form of 3
ATP and the remaining is lost as heat. The heat liberation is not a wasteful process/
since it allows ETC to go pn continuously to Benerate t ATP. Further, this heat is
necessary to maintain hody temperature.

12. MEGHANISM OF OXIDATIVE
PHOSPHORYLATION
• Several hypotheses have been put forth to explain the
process of oxidative phosphorylation.
• The most important among them-namely, chemical
coupling, and chemiosmotic.
• Chemical coupling hypothesis
• A series of phosphorylated high-energy intermediates are
first produced which are utilized for the synthesis of ATP.
• Believed to be analogous to the substrate level
phosphorylation that occurs in glycolysis or citric acid cycle.
• This hypothesis lacks experimental evidence,

13. 1.Chermical coupling hypothesis
This hypothesis was put forth by Edward Slater (1953). According
to chemical coupling hypothesis during the course of electron
transfer in respiratory chain, a series of phosphorylated high-
energy intermediates are first produced
which are utilized for the synthesis of ATP. These reactions are
believed to be analogous to the substrate level
phosphorylation that occurs in glycolysis or citric acid cycle.
However, this hypothesis lacks experimental evidence, since
all attempts, so far, to isolate any one of the high-energy
intermediates have not been successful

14. 2.CHEMIOSMOTIC THEORY
The coupling of oxidation with phosphorylation is termed oxidative
phosphorylation. Peter Mitchell in 1961 (Nobel prize, 1978) proposed this
theory to explain the oxidative phosphorylation. The transport of protons
from inside to outside of inner mitochondrial membrane is accompanied
by the generation of a proton gradient across the membrane. Protons (H+
ions) accumulate outside the membrane, creating an electrochemical
potential difference (Fig. 20.15). This proton motive force drives the
synthesis of ATP by ATP synthase complex (Fig. 20.14).

15. Fig. 20.14: ATP synthase. Protons from outside pass
through the pore of Fo into the matrix, when ATP is
synthesized

16. Proton Pump and ATP Synthesis
The proton pumps (complexes I, III and IV) expel H+ from inside to outside of
the inner membrane. So, there is high H+ concentration outside the inner
membrane. This causes H+ to enter into mitochondria through the
channels (Fo); this proton influx causes ATP synthesis by ATP synthase. A
summary is shown in Figure 20.15. The pH outside the mitochondrial inner
membrane is 1.4 units lower than inside. Further, outside is positive
relative to the inside (+0.14 V) (Fig. 20.15). The proton motive force (PMF)
is 0.224 V corresponding to a free energy change of 5.2 kcal/mol of
protons.

17. ATP Synthase (Complex V)
It is a protein assembly in the inner mitochondrial membrane.
It is sometimes referred to as the 5th Complex (Figs 20.14
and 20.15). Proton pumping ATP synthase (otherwise
called F1-Fo ATPase) is a multisubunit transmembrane
protein. It has two functional units, named as F1 and Fo. It
looks like a lollipop since the membrane embedded Fo
component and F1 are connected by a protein stalk.
Fo Unit: The “o” is pronounced as “oh”; and not as “zero”.
The “o” stands for oligomycin, as Fo is inhibited by
oligomycin. Fo unit spans inner mitochondrial membrane. It
serves as a proton channel, through which protons enter into
Mitochondria (Fig. 20.14). Fo unit has 4 polypeptide chains
and is connected to F1. Fo is water insoluble where as F1 is a
water soluble peripheral membrane protein.

18. F1 Unit: It projects into the matrix. It catalyzes the ATP synthesis (Fig. 20.14).
F1 unit has 9 polypeptide chains, (3 alpha, 3 beta, 1 gamma, 1 sigma, 1
epsilon). The alpha chains have binding sites for ATP and ADP and beta
chains have catalytic sites. ATP synthesis requires Mg++ ions.
Mechanism of ATP synthesis: Translocation of protons carried out by the Fo
catalyzes the formation of phospho-anhydride bond of ATP by F1. Coupling
of the dissipation of proton gradient with ATP synthesis (oxidative
phosphorylation) is through the interaction of F1 and Fo.
Binding Change Mechanism
The binding change mechanism proposed by Paul Boyer (Nobel prize, 1997)
explains the synthesis of ATP by the proton gradient. The ATP synthase is a
“molecular machine”, comparable to a “water-driven hammer, minting
coins”. Fo is the wheel; flow of protons is the water fall and the structural
changes in F1 lead to ATP coin being minted for each turn of the wheel.
The F1 has 3 conformation states for the alpha-beta functional unit:
O state—Does not bind substrate or products
L state—Loose binding of substrate and products
T state—Tight binding of substrate and products

19. According to this theory, the three beta subunits (catalytic sites), are in three
functional states: O form is open and has no affinity for substrates. L form
binds substrate with sluggish affinity. T form binds substrate tightly and
catalyzes ATP synthesis. As protons translocate to the matrix, the free
energy is released, and this is harnessed to interconvert these 3 states.
The bond is synthesized in the T state and ATP is released in the O state.
The sequence of events is as follows:
1. ADP and Pi bind to L binding site
2. L to T conversion is by energy driven conformational change that
catalyzes the formation of ATP
3. T state reverts to O state when ATP is released
4. L state is regenerated for further ADP binding.
For the complete rotation of F1 head through the 3 states, 10 protons are
translocated

20. Inhibitors of ATP Synthesis
Site Specific Inhibitors (Table 20.5; Fig. 20.17) Inhibitors of
Oxidative Phosphorylation
i. Atractyloside inhibits the translocase whereas oligomycin
inhibits the Fo (Table 20.5).
ii. Ionophores are lipid-soluble compounds that increase the
permeability of lipid bilayers to certain ions. There are two
types of ionophores; mobile ion carries (e.g. valinomycin) and
channel formers (e.g. gramicidin). Valinomycin allows
potassium to permeate mito-chondria and dissipate the
proton gradient.
iii. The toxicity of cyanide is due to its inhibitory effect on the
terminal cytochrome, which brings cellular respiration to a
standstill.

21. Uncouplers of Oxidative Phosphorylation
• Uncouplers will allow oxidation to proceed, but the energy
instead of being trapped by phosphorylation is dissipated as
heat. This is achieved by removal of the proton gradient.
(Table 20.5; Fig. 20.17).