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Design and Engineering of Open Source Hardware for Pressure Regulation in the
Study of Vascular Processes
Alexander Novokhodko1, Christian Mandrycky1, and Ying Zheng1,2,3
1Department of Bioengineering, 2Center for Cardiovascular Biology, 3Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA ZHENGLAB
Goal: Controlling Pressure to study endothelial cell
response in vitro
Approach:
o Syringe Pump based Control System
o Ensuring Steady Flow
o In vitro microvessels in flow chamber
3
Existing Problems:
Oscillation at set point:
• Current Percent Error: 2.95%, 2.97%, 4.547%.
Imperfect Adaptation: Steady state deviation from set
point
• .0935%, 1%, 2.835%
Target: Maximum Percent Error + Adaptation must not
exceed 2% to match [6]
• Currently, worst case error is 7.382%. Too high!
Solution: PID Control (Proportional, Integral,
Differential)
• Problem: Motor step size is too large to implement a
PID Duty Cycle
• Solution: Gearing down the motor (see Figure 6)
Unsteady flow: Flow is currently pulsatile/disrupted
• Adjust when the valve (figure 5) is open or closed
Figure 1: Forces on Endothelial
Cells. [1]
Results
The Biological Need: Cells Under Pressure
Problem: High cost of
commercially available hardware
• $4,767 for Constant Pressure
Syringe Pump from Harvard
Apparatuses [6]
Solution: Open Source Hardware
Exchange of CAD files
• OpenSCAD
• My work is based on “Open-
Source Syringe Pump Library” [7]
published in PLOS ONE
• Creative Commons Attribution
License
3D Printing
• Low cost (see Table 1)
Rapid Prototyping
• See Figures 5 and 6
Customizability
Arduino Microcontroller
• Arduino code and explanation of
algorithm available upon request
Why Open Source Hardware?
Endothelial cell response to blood
pressure:
• Vasoconstriction, vasodilation
• Veins vs. Arteries
• Venous endothelial cells differ
from arterial ones. [2]
• Why? Pressure? Or different
signals during development?
• Can we use this to prevent
saphenous vein graft failure
during coronary bypass
surgery?
Vasculogenesis/Angiogenesis during
development
• Once the embryonic heart starts
beating the vasculature remodels. [3]
How?
Steady flow:
• Outside the largest arteries, flow is
steady, not pulsatile
• Except in the aorta, flow is laminar [4]
• Pressure is approximately constant
In vitro studies:
• Study effect of pressure in isolation
• Control pressure to study other
variables
Need: Pressure Control System that
maintains steady laminar flow
References
1. Davies, P. & Tripathi, S. Mechanical stress mechanisms and the cell. An endothelial paradigm.
Circulation Research 72, 239-245 (1993).
2. dela Paz, N. & D’Amore, P. Arterial versus venous endothelial cells. Cell Tissue Res 335, 5-16 (2008).
3. Mechanisms of angiogenesis. Nature 386, 671-674 (1997).
4. Stein, P. & Sabbah, H. Turbulent blood flow in the ascending aorta of humans with normal and
diseased aortic valves. Circulation Research 39, 58-65 (1976).
5. Klabunde, R. CV Physiology: Systemic Circulation. Cvphysiology.com (2016). at
<http://www.cvphysiology.com/Blood%20Pressure/BP019.htm>
6. Standard PHD ULTRA™ CP Syringe Pump. Harvard Apparatuses (2016). at
<http://www.harvardapparatus.com/pumps-liquid-handling/syringe-pumps/constant-
pressure/standard-phd-ultra-trade-cp-syringe-pump.html>
7. Wijnen, B., Hunt, E. J., Anzalone, G. C., & Pearce, J. M. (2014, September 17). Open-Source Syringe
Pump Library. PlosONE, 9(9), 1-8. doi:10.1371/journal.pone.0107216
8. Tiny Planetary Gears Set by aubenc. Thingiverse.com (2012). at
<http://www.thingiverse.com/thing:23030>
9. Zheng, Y. et al. In vitro microvessels for the study of angiogenesis and thrombosis. Proceedings of the
National Academy of Sciences 109, 9342-9347 (2012).
Figure 2: Pressure in different parts
of the circulation [5]
Control Systems
Figure 3: Basic Schematic of Syringe Pump-
Based Constant Pressure System
Figure 4: Maintaining a constant water pressure across a flow chamber
Future Applications:
Casing: To improve portability and usability
Vasculogenesis/Angiogenesis: Prepare flow chambers
with collagen seeded with endothelial cells
• Apply constant pressure at inlet
• Observe vasculogenesis in pressurized vs. control gel
Veins vs. Arteries
• Make flow chambers with channels, seeded with
endothelial cells.
• The vessels in “In vitro microvessels for the study of
angiogenesis and thrombosis” [9] are a starting point
• Apply pressures characteristic of veins and arteries
(Figure 2) and observe differences in cell phenotype
Component Cost
Arduino Uno R3 (Atmega328 -
assembled)
$24.95
3D-Printed Components (PLA
filament)
<$4.00
NEMA-17 Stepper Motor $14.00
Omega Low Pressure Transducer $205.00
Polulu Adjustable Boost
Regulator
$11.95
Readily Available Mechanical
Components (bolts, z-couplings,
nuts, resistors, wires, etc.)
<$10.00
Two-way normally closed
solenoid pinch valve; 12 VDC,
1/32" ID x 3/32" OD tubing
$62.00
Adafruit Motor/Stepper/Servo
Shield for Arduino v2 Kit - v2.3
$19.95
Total 351.85
Table 1: Cost of pump
components
Figure 6: Geared down motor 3D
printed prototype. Derived from [8]
Figure 5: Clockwise from top left:
1: Circuit Diagram of Control
System, 2: Valve on Outlet, 3: Flow
validation via fluorescence
microscopy 4: Pump during flow
validation.
Figure 7: In vitro microvascular
networks are the specialty of the
Zheng Lab [9]
Acknowledgements: We acknowledge the support from the Zheng lab and NIH awards (1DP2DK102258 and UH2/UH3 TR000504)

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Poster Template

  • 1. b Design and Engineering of Open Source Hardware for Pressure Regulation in the Study of Vascular Processes Alexander Novokhodko1, Christian Mandrycky1, and Ying Zheng1,2,3 1Department of Bioengineering, 2Center for Cardiovascular Biology, 3Institute of Stem Cell and Regenerative Medicine, University of Washington, Seattle, WA ZHENGLAB Goal: Controlling Pressure to study endothelial cell response in vitro Approach: o Syringe Pump based Control System o Ensuring Steady Flow o In vitro microvessels in flow chamber 3 Existing Problems: Oscillation at set point: • Current Percent Error: 2.95%, 2.97%, 4.547%. Imperfect Adaptation: Steady state deviation from set point • .0935%, 1%, 2.835% Target: Maximum Percent Error + Adaptation must not exceed 2% to match [6] • Currently, worst case error is 7.382%. Too high! Solution: PID Control (Proportional, Integral, Differential) • Problem: Motor step size is too large to implement a PID Duty Cycle • Solution: Gearing down the motor (see Figure 6) Unsteady flow: Flow is currently pulsatile/disrupted • Adjust when the valve (figure 5) is open or closed Figure 1: Forces on Endothelial Cells. [1] Results The Biological Need: Cells Under Pressure Problem: High cost of commercially available hardware • $4,767 for Constant Pressure Syringe Pump from Harvard Apparatuses [6] Solution: Open Source Hardware Exchange of CAD files • OpenSCAD • My work is based on “Open- Source Syringe Pump Library” [7] published in PLOS ONE • Creative Commons Attribution License 3D Printing • Low cost (see Table 1) Rapid Prototyping • See Figures 5 and 6 Customizability Arduino Microcontroller • Arduino code and explanation of algorithm available upon request Why Open Source Hardware? Endothelial cell response to blood pressure: • Vasoconstriction, vasodilation • Veins vs. Arteries • Venous endothelial cells differ from arterial ones. [2] • Why? Pressure? Or different signals during development? • Can we use this to prevent saphenous vein graft failure during coronary bypass surgery? Vasculogenesis/Angiogenesis during development • Once the embryonic heart starts beating the vasculature remodels. [3] How? Steady flow: • Outside the largest arteries, flow is steady, not pulsatile • Except in the aorta, flow is laminar [4] • Pressure is approximately constant In vitro studies: • Study effect of pressure in isolation • Control pressure to study other variables Need: Pressure Control System that maintains steady laminar flow References 1. Davies, P. & Tripathi, S. Mechanical stress mechanisms and the cell. An endothelial paradigm. Circulation Research 72, 239-245 (1993). 2. dela Paz, N. & D’Amore, P. Arterial versus venous endothelial cells. Cell Tissue Res 335, 5-16 (2008). 3. Mechanisms of angiogenesis. Nature 386, 671-674 (1997). 4. Stein, P. & Sabbah, H. Turbulent blood flow in the ascending aorta of humans with normal and diseased aortic valves. Circulation Research 39, 58-65 (1976). 5. Klabunde, R. CV Physiology: Systemic Circulation. Cvphysiology.com (2016). at <http://www.cvphysiology.com/Blood%20Pressure/BP019.htm> 6. Standard PHD ULTRA™ CP Syringe Pump. Harvard Apparatuses (2016). at <http://www.harvardapparatus.com/pumps-liquid-handling/syringe-pumps/constant- pressure/standard-phd-ultra-trade-cp-syringe-pump.html> 7. Wijnen, B., Hunt, E. J., Anzalone, G. C., & Pearce, J. M. (2014, September 17). Open-Source Syringe Pump Library. PlosONE, 9(9), 1-8. doi:10.1371/journal.pone.0107216 8. Tiny Planetary Gears Set by aubenc. Thingiverse.com (2012). at <http://www.thingiverse.com/thing:23030> 9. Zheng, Y. et al. In vitro microvessels for the study of angiogenesis and thrombosis. Proceedings of the National Academy of Sciences 109, 9342-9347 (2012). Figure 2: Pressure in different parts of the circulation [5] Control Systems Figure 3: Basic Schematic of Syringe Pump- Based Constant Pressure System Figure 4: Maintaining a constant water pressure across a flow chamber Future Applications: Casing: To improve portability and usability Vasculogenesis/Angiogenesis: Prepare flow chambers with collagen seeded with endothelial cells • Apply constant pressure at inlet • Observe vasculogenesis in pressurized vs. control gel Veins vs. Arteries • Make flow chambers with channels, seeded with endothelial cells. • The vessels in “In vitro microvessels for the study of angiogenesis and thrombosis” [9] are a starting point • Apply pressures characteristic of veins and arteries (Figure 2) and observe differences in cell phenotype Component Cost Arduino Uno R3 (Atmega328 - assembled) $24.95 3D-Printed Components (PLA filament) <$4.00 NEMA-17 Stepper Motor $14.00 Omega Low Pressure Transducer $205.00 Polulu Adjustable Boost Regulator $11.95 Readily Available Mechanical Components (bolts, z-couplings, nuts, resistors, wires, etc.) <$10.00 Two-way normally closed solenoid pinch valve; 12 VDC, 1/32" ID x 3/32" OD tubing $62.00 Adafruit Motor/Stepper/Servo Shield for Arduino v2 Kit - v2.3 $19.95 Total 351.85 Table 1: Cost of pump components Figure 6: Geared down motor 3D printed prototype. Derived from [8] Figure 5: Clockwise from top left: 1: Circuit Diagram of Control System, 2: Valve on Outlet, 3: Flow validation via fluorescence microscopy 4: Pump during flow validation. Figure 7: In vitro microvascular networks are the specialty of the Zheng Lab [9] Acknowledgements: We acknowledge the support from the Zheng lab and NIH awards (1DP2DK102258 and UH2/UH3 TR000504)