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THE CELL
Though chemical analysis of living things is
possible, because of its complex organization and
interaction of molecules Life in the form of living
cell can not be produced
Cell is the smallest living entity which serves living
building blocks for the immensely complicated
whole body.
THE CELL
Life in the form of living cell can not be produced
Cell theory – relation between cell and life
• Cell is the smallest structural & functional
unit. Can carry out living processes
• Functional activities related to the specific
structural property
• Living building blocks of animal or plant
• Organism’s structure and function depends
upon characteristics of its cells
• All new life & new cells are formed from
preexisting cell
• Cells of one organism are fundamentally
similar in structure & function
Observation of cell
Cannot be seen by naked eye – smallest visible
particle is 5-10 times larger than typical cell
Seen by microscope – middle of 17th century
Better vision of cells in tissues with ‘soapy mixture’
of fluid inside – early 19th century
Electron microscopy – internal structure of cell –
1940
Recently,- powerful microscopes, biochemical
techniques, cell culture technology, genetic
engineering
Overview of Cell structure –Total trillion cells
- 200 different cell types
3 Subdivisions
Plasma membrane Nucleus Cytoplasm
Encloses
the cell
Contain cells
genetic
material
Portion of
cell interior
not occupied
by nucleus
Plasma membrane –
thin membranous structure enclosing each cell
Oily barrier bet. ECF & ICF
Holds contents of cell
Gated wall – selective movement of mol. Bet
ICF & ECF
Nucleus –
- Largest, single, organized compartment
- Spherical or oval, near the centre
- surrounded by double layered
nuclear membrane having nuclear pores
allowing traffic between nucleus and
cytoplasm
- Genetic material in nucleus – DNA
Functions of nucleus
directs synthesis of proteins - serves as genetic
blue print during cell
duplication
DNA provides
‘instructions’ through
3types of RNA
Structural and enzymes
controlling chemical reactions
Messenger
RNA
Ribosomal
RNA
Transfer
RNA
- Continue
identical type of
cell line within
the body and in
reproductive cell
to transfer genetic
material to next
generation
Cytoplasm
I Cytosol
Complex gel
like liquid
elaborate protein
network
(cytoskeleton)
Site for compatible
chemical reactions
-gives shape
-Provides internal
organization
-Regulates its
movements
Organelles
Cytosol
II Organelles distinct,
highly organized,
membrane enclosed,
occupies about ½ of total
cell volume
‘Speciality shops’ in cell
Separate compartment
Separate contents
Each organelle
6 main types of organelles
 Endoplasmic reticulum
 Rough ER
 Smooth ER
 Golgi complex
 Lysosomes
 Peroxysomes
 Mitochondria
 Vaults
- similar in all cells
- contain specific set
of chemicals
required for
particular cellular
function
- can carryout
incompatible
chemical reactions
simultaneously
Endoplasmic reticulum -- protein and lipid
manufacturing factory.
SER RER
Elaborate, fluid filled
extensively distributed,
membranous system
2 types continuous with each other and their
relative amount varies with the function of
cell
SER – network of tiny interconnected tubules
RER – project outwards from SER as stacks of
flattened sacks
- outer surface of membrane studded
with ribosomes – rough granular appearance
New protein on ribosomal RNA
Released in ER lumen
Exterior as
hormones or
enzymes
Construction of
new cell
membrane or
organelles
Synthesis of lipids by enzymes present in the
membrane → released to lumen with protein →
pressed → attachment of carbohydrate → buds off as
transport vesicle
Smooth ER -No ribosome, so not involved in
protein synthesis,
- serve as a central packaging &
discharge site for molecules which are
to be transported from ER
-formation of Transport vesicles which
contain new protein and lipid and is
membrane bound and passes to Golgi
complex , formation of peroxisomes
- Membrane used is replaced by newly
formed protein & lipid
Additional responsibilities in different cells
1) Steroid secreting cells have abundant SER
2) Liver cells – membrane of SER contain
enzymes involved in detoxification
3) In muscle cells SER stores Ca++ which
plays imp. role in process of muscle
contraction
Golgi Complex
Stacks of flattened, curved,
membrane bound sacs or cisterns
-may not be physically connected
with each other
-thin at the center and dilated at
the periphery
- Number varies –cells
specialized in pr. synthesis may
have 100s of sacs
Mechanism of function
Transport vesicles containing Cargo from SER
fuses with the inner most sac of Golgi complex →
material travel through the layers of sacs to the
outer sacs in the form of transport vesicles
During transit
1) raw material final finished product
2) sorting and directing the finished products
a) secretion to exterior of cell
b) construction of new plasma membrane
c) incorporated in other organelles e.g. lysosomes
Secretory vesicles
Membrane with
specific proteins
Recognition
marker for
cargo on inner
surface
Coat proteins
for curling of
membrane
Docking
marker on
outer side
inside
coat
protein –
v-SNARE
Cargo – conc. finished product with
appropriate a.a. sequence acting as
sorting signal
Exocytosis
Budding off vesicles in cytosol seperating
specialized finished products from cytosol .
Movement towards membrane on appropriate signals
Attachment with special pr. marker on target
membrane – t SNARE
Fusion of membrane
Opening of vesicle
Release of secretion
Peculiarities of secretary process
1) Once pr. is synthesized does come in
contact with cytosol
2) Synthesis and storage are well ahead
of time of requirement
3)Diffferent secretory vesicles for
different destination
Lysosomes
Membrane enclosed sacs containing powerful
hydrolytic enzymes
Average number – 300 per cell
No fixed structure- vary in size and shape
0.2 – 0.5 μm in diameter
Granular when inactive
Membrane protects rest of the cell
Membrane and enzymes from Golgi complex
Extracellular material to be tackled by
lysosome is brought into the cell by
endocytosis
3 types
pinocytosis
Receptor
mediated
endocytosis
phagocytosis
Specialised
cells
All cells
A.Pinocytosis - Cell drinking nonselective
continuous process seen in all cells
•Membrane deforming protein attached to membrane
•Formation of pouch by dipping of membrane
•Sealing of ends
•Endocytic vesicle with ECF
•Vesicle is pinched off by protein Dynamin
•ECF to the cell and loss of extra plasma membrane
added during exocytosis
dynamin
Membrane deforming
coat protein
Endocytic
vesicle
ECF
Pinocytosis
ECF
B. Receptor mediated endocytosis – highly
selective process to import imp. specific large
molecules. Requires energy & Ca++
Coated pit
Cathrin, actin,
myosin
C. Phagocytosis
• Internalization of large
multimolecular particles by
specialized cells e.g. certain
types of w.b.c.s ( Professional
phagocytes)
Pseudopodia
internalization
Fusion
digestion
absorption
Residual
body
Phagoso-
some
Phagocytosis
bactebactium
Autophagy –
Role in regression of organ – uterus, mammary glands
Removal of aged or damaged organelles
Rupture of lysosomal membrane CAUSES SELF
DESTRUCTION but minimal damage because
optimum pH for hydrolytic enzymes is acidic.
Damage to nuclear DNA alters genetic properties
Deficiency of one or more enzymes lead to
storage disease e.g. TAY SACHS disease-
Peroxisomes
Several hundreds
½ to 1/3 size of lysosomes
Transport of H+ across membrane so acidic pH
Membrane enclosed sacs with powerful oxidizing
enzymes which use O2 to remove hydrogen from
organic molecules and detoxify wastes produced in the
cell or foreign toxic compound by formation of H2O2
which is oxidant but accumulation is prevented by
catalase which is antioxidant
H2O2 →H2O + O2
Mitochondria
Outer membrane
Inner membrane
Crista
Matrix Intermembrane space
Electron
transport
protein
Dissolved enzymes for citric
acid cycle Chemiosmotic
reactions
100s-1000s in single cell
Energy organelle or power plant
Extract energy from nutrient and transfer in to
usable form
Number and location in cell varies
Round shaped or oval
Possess their own DNA which produces molecules
required for generating energy
Defect in DNA lead to degenerative diseases or
ageing
Double membrane – outer smooth, inner folded
forming cristae
Energy release from the nutrients and its storage
Dietary food
Smaller absorbable molecules
In the cell through membrane
digestion
Energy in carbon bonds
Through cell
Anaerobic glycolysis
2Acetyl co A
Cristae
2 ATP
2 pyruvic acid
mol.
1 mol. Of glucose
Cytosol
2 ATP
4NADH+2FADH2
Low energy
compounds
+ electron
+
Matrix
+
+
32 ATP
O2 + e
H+ e
Intermembrane space
Chemiosmotic reaction ADP + Pi
Citric acid cycle
Electron transport
-
-
Synthesis of ATP- Oxidative phosphorylation
 Release of energy during electron transport
reactions used for active uptake of H+ by inner
membrane
 Accumulation of H+ in intermembrane space
 Transport of H+ through channels in inner
membrane
 Activation of ATP sythetase attached to
channel protein
 ADP + Pi ATP (32mol) with utilization of
O2 from atm.
H+ H+ H+ H+
H+ H+ H+ H+ H+ H+ H+ H+
ATP
synthetase
ADP + Pi ATP
Chemiosmotic reactions
Uses of ATP
1. Synthesis of new chemical compounds for
secretion and growth
2. Membrane transport
3. Mechanical work
Vaults
 3 times larger than ribosomes
 Octagonal barrels with hollow interior
 Not seen with ordinary stain
 Pass through nuclear pore
 transporting messenger RNA and other material
across nuclear membrane
 May be responsible for multi drug resistance in
cancer cells.
Cytosol
 Semi liquid surrounding organelles
 Highly organized gel like mass with different
composition at diff. sites
 Cytoskeleton is dispersed through out
 enzymes regulating intermediary reactions
 Ribosomal protein synthesis (used for cell)
 Storage of fats, glycogen ( Inclusions),
secretory vesicles
Cytoskeleton
Complex protein network portion of cytosol which
act as ‘bones and muscles ‘ of the cell.giving shape
, support and control their movements
3 elements
Microtubules microfilament intermediate filaments
Tubulin
subunit
Microtubules Largest skeletal element, slender, long
hollow unbranched tubes
Functions
A) Maintains asymmetric cell shape e.g.
axon
B) Transport of secretary vesicles and
other materials in any direction by
use of motor protein and energy
• Movement of specialized cell
projection such as cilia, flagellum
• Distribution of chromosomes during
mitosis of spindles
Actin
subunit
Microfilament
- Smallest element of cytoskeleton
- Actin is present in most cells
- 2 strands of globular actin
- Role in the cell -
Cellular contractile system
Mechanical stiffener for
cellular projection-microvilli
Intermediate filaments
Tough, maintain structure integrity of cell and
resist mechanical stress
e.g. microfilaments in axon
Keratin in skin cells
Functional systems of cells
I. Ingestion
II. Digestion of foreign substances
III.Synthesis and formation of new
structures
IV.Energy extraction
V. Locomotion – ameboid movement,
ciliary movement

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The Cell

  • 1. THE CELL Though chemical analysis of living things is possible, because of its complex organization and interaction of molecules Life in the form of living cell can not be produced Cell is the smallest living entity which serves living building blocks for the immensely complicated whole body.
  • 2. THE CELL Life in the form of living cell can not be produced
  • 3. Cell theory – relation between cell and life • Cell is the smallest structural & functional unit. Can carry out living processes • Functional activities related to the specific structural property • Living building blocks of animal or plant • Organism’s structure and function depends upon characteristics of its cells • All new life & new cells are formed from preexisting cell • Cells of one organism are fundamentally similar in structure & function
  • 4. Observation of cell Cannot be seen by naked eye – smallest visible particle is 5-10 times larger than typical cell Seen by microscope – middle of 17th century Better vision of cells in tissues with ‘soapy mixture’ of fluid inside – early 19th century Electron microscopy – internal structure of cell – 1940 Recently,- powerful microscopes, biochemical techniques, cell culture technology, genetic engineering
  • 5. Overview of Cell structure –Total trillion cells - 200 different cell types 3 Subdivisions Plasma membrane Nucleus Cytoplasm Encloses the cell Contain cells genetic material Portion of cell interior not occupied by nucleus
  • 6.
  • 7. Plasma membrane – thin membranous structure enclosing each cell Oily barrier bet. ECF & ICF Holds contents of cell Gated wall – selective movement of mol. Bet ICF & ECF
  • 8. Nucleus – - Largest, single, organized compartment - Spherical or oval, near the centre - surrounded by double layered nuclear membrane having nuclear pores allowing traffic between nucleus and cytoplasm - Genetic material in nucleus – DNA
  • 9. Functions of nucleus directs synthesis of proteins - serves as genetic blue print during cell duplication DNA provides ‘instructions’ through 3types of RNA Structural and enzymes controlling chemical reactions Messenger RNA Ribosomal RNA Transfer RNA - Continue identical type of cell line within the body and in reproductive cell to transfer genetic material to next generation
  • 10. Cytoplasm I Cytosol Complex gel like liquid elaborate protein network (cytoskeleton) Site for compatible chemical reactions -gives shape -Provides internal organization -Regulates its movements Organelles Cytosol
  • 11. II Organelles distinct, highly organized, membrane enclosed, occupies about ½ of total cell volume ‘Speciality shops’ in cell Separate compartment Separate contents Each organelle
  • 12. 6 main types of organelles  Endoplasmic reticulum  Rough ER  Smooth ER  Golgi complex  Lysosomes  Peroxysomes  Mitochondria  Vaults - similar in all cells - contain specific set of chemicals required for particular cellular function - can carryout incompatible chemical reactions simultaneously
  • 13. Endoplasmic reticulum -- protein and lipid manufacturing factory. SER RER Elaborate, fluid filled extensively distributed, membranous system 2 types continuous with each other and their relative amount varies with the function of cell
  • 14. SER – network of tiny interconnected tubules RER – project outwards from SER as stacks of flattened sacks - outer surface of membrane studded with ribosomes – rough granular appearance
  • 15. New protein on ribosomal RNA Released in ER lumen Exterior as hormones or enzymes Construction of new cell membrane or organelles Synthesis of lipids by enzymes present in the membrane → released to lumen with protein → pressed → attachment of carbohydrate → buds off as transport vesicle
  • 16. Smooth ER -No ribosome, so not involved in protein synthesis, - serve as a central packaging & discharge site for molecules which are to be transported from ER -formation of Transport vesicles which contain new protein and lipid and is membrane bound and passes to Golgi complex , formation of peroxisomes - Membrane used is replaced by newly formed protein & lipid
  • 17. Additional responsibilities in different cells 1) Steroid secreting cells have abundant SER 2) Liver cells – membrane of SER contain enzymes involved in detoxification 3) In muscle cells SER stores Ca++ which plays imp. role in process of muscle contraction
  • 18. Golgi Complex Stacks of flattened, curved, membrane bound sacs or cisterns -may not be physically connected with each other -thin at the center and dilated at the periphery - Number varies –cells specialized in pr. synthesis may have 100s of sacs
  • 19. Mechanism of function Transport vesicles containing Cargo from SER fuses with the inner most sac of Golgi complex → material travel through the layers of sacs to the outer sacs in the form of transport vesicles During transit 1) raw material final finished product 2) sorting and directing the finished products a) secretion to exterior of cell b) construction of new plasma membrane c) incorporated in other organelles e.g. lysosomes
  • 20. Secretory vesicles Membrane with specific proteins Recognition marker for cargo on inner surface Coat proteins for curling of membrane Docking marker on outer side inside coat protein – v-SNARE Cargo – conc. finished product with appropriate a.a. sequence acting as sorting signal
  • 21. Exocytosis Budding off vesicles in cytosol seperating specialized finished products from cytosol . Movement towards membrane on appropriate signals Attachment with special pr. marker on target membrane – t SNARE Fusion of membrane Opening of vesicle Release of secretion
  • 22. Peculiarities of secretary process 1) Once pr. is synthesized does come in contact with cytosol 2) Synthesis and storage are well ahead of time of requirement 3)Diffferent secretory vesicles for different destination
  • 23. Lysosomes Membrane enclosed sacs containing powerful hydrolytic enzymes Average number – 300 per cell No fixed structure- vary in size and shape 0.2 – 0.5 μm in diameter Granular when inactive Membrane protects rest of the cell Membrane and enzymes from Golgi complex
  • 24. Extracellular material to be tackled by lysosome is brought into the cell by endocytosis 3 types pinocytosis Receptor mediated endocytosis phagocytosis Specialised cells All cells
  • 25. A.Pinocytosis - Cell drinking nonselective continuous process seen in all cells •Membrane deforming protein attached to membrane •Formation of pouch by dipping of membrane •Sealing of ends •Endocytic vesicle with ECF •Vesicle is pinched off by protein Dynamin •ECF to the cell and loss of extra plasma membrane added during exocytosis
  • 27. B. Receptor mediated endocytosis – highly selective process to import imp. specific large molecules. Requires energy & Ca++ Coated pit Cathrin, actin, myosin
  • 28. C. Phagocytosis • Internalization of large multimolecular particles by specialized cells e.g. certain types of w.b.c.s ( Professional phagocytes)
  • 30. Autophagy – Role in regression of organ – uterus, mammary glands Removal of aged or damaged organelles Rupture of lysosomal membrane CAUSES SELF DESTRUCTION but minimal damage because optimum pH for hydrolytic enzymes is acidic. Damage to nuclear DNA alters genetic properties Deficiency of one or more enzymes lead to storage disease e.g. TAY SACHS disease-
  • 31. Peroxisomes Several hundreds ½ to 1/3 size of lysosomes Transport of H+ across membrane so acidic pH Membrane enclosed sacs with powerful oxidizing enzymes which use O2 to remove hydrogen from organic molecules and detoxify wastes produced in the cell or foreign toxic compound by formation of H2O2 which is oxidant but accumulation is prevented by catalase which is antioxidant H2O2 →H2O + O2
  • 32. Mitochondria Outer membrane Inner membrane Crista Matrix Intermembrane space Electron transport protein Dissolved enzymes for citric acid cycle Chemiosmotic reactions
  • 33. 100s-1000s in single cell Energy organelle or power plant Extract energy from nutrient and transfer in to usable form Number and location in cell varies Round shaped or oval Possess their own DNA which produces molecules required for generating energy Defect in DNA lead to degenerative diseases or ageing Double membrane – outer smooth, inner folded forming cristae
  • 34. Energy release from the nutrients and its storage Dietary food Smaller absorbable molecules In the cell through membrane digestion Energy in carbon bonds Through cell
  • 35. Anaerobic glycolysis 2Acetyl co A Cristae 2 ATP 2 pyruvic acid mol. 1 mol. Of glucose Cytosol 2 ATP 4NADH+2FADH2 Low energy compounds + electron + Matrix + + 32 ATP O2 + e H+ e Intermembrane space Chemiosmotic reaction ADP + Pi Citric acid cycle Electron transport - -
  • 36. Synthesis of ATP- Oxidative phosphorylation  Release of energy during electron transport reactions used for active uptake of H+ by inner membrane  Accumulation of H+ in intermembrane space  Transport of H+ through channels in inner membrane  Activation of ATP sythetase attached to channel protein  ADP + Pi ATP (32mol) with utilization of O2 from atm.
  • 37. H+ H+ H+ H+ H+ H+ H+ H+ H+ H+ H+ H+ ATP synthetase ADP + Pi ATP Chemiosmotic reactions
  • 38. Uses of ATP 1. Synthesis of new chemical compounds for secretion and growth 2. Membrane transport 3. Mechanical work
  • 39. Vaults  3 times larger than ribosomes  Octagonal barrels with hollow interior  Not seen with ordinary stain  Pass through nuclear pore  transporting messenger RNA and other material across nuclear membrane  May be responsible for multi drug resistance in cancer cells.
  • 40. Cytosol  Semi liquid surrounding organelles  Highly organized gel like mass with different composition at diff. sites  Cytoskeleton is dispersed through out  enzymes regulating intermediary reactions  Ribosomal protein synthesis (used for cell)  Storage of fats, glycogen ( Inclusions), secretory vesicles
  • 41. Cytoskeleton Complex protein network portion of cytosol which act as ‘bones and muscles ‘ of the cell.giving shape , support and control their movements 3 elements Microtubules microfilament intermediate filaments
  • 42. Tubulin subunit Microtubules Largest skeletal element, slender, long hollow unbranched tubes Functions A) Maintains asymmetric cell shape e.g. axon B) Transport of secretary vesicles and other materials in any direction by use of motor protein and energy • Movement of specialized cell projection such as cilia, flagellum • Distribution of chromosomes during mitosis of spindles
  • 43. Actin subunit Microfilament - Smallest element of cytoskeleton - Actin is present in most cells - 2 strands of globular actin - Role in the cell - Cellular contractile system Mechanical stiffener for cellular projection-microvilli
  • 44. Intermediate filaments Tough, maintain structure integrity of cell and resist mechanical stress e.g. microfilaments in axon Keratin in skin cells
  • 45. Functional systems of cells I. Ingestion II. Digestion of foreign substances III.Synthesis and formation of new structures IV.Energy extraction V. Locomotion – ameboid movement, ciliary movement