SlideShare a Scribd company logo
1 of 1
Variation of the acylsucrose biosynthesis pathway
catalyzed by ASAT2 and 3 in wild tomato species
Abigail M. Miller1, Pengxiang Fan1, and Robert L. Last1,2
1Department of Biochemistry and Molecular Biology, 2Department of Plant Biology, Michigan State Univeristy, East Lansing, MI 48824, United States of America
Background: The acylsucrose biosynthesis pathway is composed of a sucrose backbone with multiple acyl-CoA donors added onto the pyranose and furanose
rings. This research shows the variation and manipulation of acyl donors and acyl acceptors between S. lycopersicum, the cultivated tomato, and other wild tomato
accessions. Through multiple enzyme assays, and mutagenesis, this research helps develop the framework for manipulation of a secondary pathway and illustrates
the natural diversity and evolution of acylsugars in tomato plants.
1
7
4
3
2
S. lycopersicum
S. pennellii
S1:5 (R4)
S2:10 (R2, R4)
S2:10 (R3,R4)
S3:22 (R2,R3,R4)
SpASAT3
SlASAT2
SpASAT2
6
5 8
7
Enzyme S1:5 + iC5 S2:10 + iC5 S2:10 + nC12
SpASAT3 S2:10 X X
SlASAT3 X S3:15 S3:22
1376SpASAT3 S2:10 X X
1278SpeASAT3_1 S2:10 S3:15 S3:22
1718ShASAT3 S2:10 S3:15 S3:22
1969SchASAT3 S2:10 S3:15 S3:22
1278SpeASAT3_2 S2:10 S3:15 S3:22
1364ShuASAT3 S2:10 S3:15 S3:22
2172SaASAT3 X S3:15 X
Common acylsugar structure found in
S. lycopersicum. Acyl chains added by ASAT2
on the R3 position, and by ASAT3 on the R2
position of the pyranose ring (Kim 2010).
Acylsugars are a natural
pesticide for the tomato
plant. Hornworm larvae on
tobacco plants eat
acylsugars as a first meal,
and are tagged with volatile
components which attract
predators
(Weinhold 2011).
Protein homology model used to find amino acids for
mutagenesis to test ASAT2 activity. Phe408Val results in a
gain of activity shown in the chromatogram below.
Pathway difference between S. lycopersicum and S. pennellii.
S. pennellii acylsugars have a completely acylated pyranose ring,
and no acyl chains on the furanose ring (Schilmiller 2015).
Multiple sequence alignment (MSA) of ASAT3 in wild tomatoes, G
to C aligns with the activity of S. lycopersicum differing from S.
pennellii when using S1:5 as a substrate.
SlASAT2
SlASAT2_C304G
1777ASAT2
Mutagenesis of C304G ASAT2 which gains activity to use S2:10 as
a substrate.
iC5-CoA
aiC5-CoA
nC12-CoA
SpASAT2_HC-QY
SlASAT3_YCT-HSV
S1:5(R4)
+iC5-CoA
Mutagenesis of SlASAT3 gains the activity to use S1:5(R4) as a
substrate. Mutations found using the same method as demonstrated
in section 4.
What about S. pennellii ASAT3 using S2:10?
SlASAT2_C304G
SpASAT2_HC-QY
SlASAT3_YCT-HSV
Activity of ASAT3 in wild tomatoes and S. lycopersicum was tested
in order to find a correlation for SpASAT3 using S2:10. Species
were selected based on sequence alignment resembling both
S. lycopersicum and S. pennellii activity.
Future Work
References and Acknowledgements
Retention time for S3:22 is shifted for 1718ShASAT3 which
indicates that the nC12-CoA is added on at a different position
on the furanose ring. The original position is on the R3’, but
this shows that it is somewhere new.
1969SpASAT3
1278SpeASAT3
1777ShASAT3
The NSF for funding the Trichome project, Lyman Briggs College for Spring 2015 research
scholarships, and ASPB for funding Summer 2015 research.
Schilmiller AL, Charbonneau AL, Last RL (2012a) Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. Proc
Natl Acad Sci USA 109:16377-82.
Weinhold A, Baldwin IT (2011) Trichome-derived O-acyl sugars are a first meal for caterpillars that tags them for predation. Proc Natl Acad USA 108: 7855-
7859.
Kim J, Kang K, Gonzales-Vigil E. Shi F, Jones AD, Barry CS, Last RL (2012) Striking natural diversity in glandular trichome acylsugar composition is shaped by
variation at the Acyltransferase2 locus in the wild tomato Solanum habrochaites. Plant Physiol 160:1854-70.
Schillmiller A, Shi F, Kim J, Charbonneau AL, Holmes D, Jones AD, Last RL (2010) Mass spectrometry screening reveals widespread diversity in trichome
specialized metabolites of tomato chromosomal substitution lines. Plant J 62: 391-403.
Schilmiller AL, Moghe GD, Fan P, Ghosh B, Ning J, Jones AD, Last RL (2015) Functionally Divergent Alleles and Duplicated Loci Encoding an Acyltransferase
Contribute to Acylsugar Metabolite Diversity in Solanum Trichomes. Plant Cell. Doi: 10.1105/tpc.15.00087
Ghosh B, Westbrook T, Jones AD. 2013. Comparative structural profiling of trichome specialized metabolites in tomato (Solanum lycopersicum) and S.
habrochaites: acylsugar profiles revealed by UHPLC/MS and NMR. Metabolomics: 1-12.
Alignments of the S. pennellii
and the wild tomato species will
help us understand the
evolutionary significance of this
pathway divergence.
Analyzing the retention time
differences in section 8 will
need to be conducted and NMR
structures will also need to be
developed.
Summary of the three mutations
Acyl-acceptor mutagenesis
Proposed acylsucrose pathway
Mutagenesis with three mutations
ASAT2 acyl-donor mutagenesis
What about SpASAT3 using S2:10?Mutagenesis HC135QY
S3:15
S4:17
2172ASAT2_V408F
2172ASAT2
SlASAT2_F408V
SlASAT2
-
-
-
-
-
+
+
+
+
+
-
-
-
-
ASAT2
ASAT3
S1:5
S1:5
S1:5 as substrate
Mutations found through a similar MSA method as in section 4.

More Related Content

Similar to Midsure poster 2015

ASPB Poster 2016-AbigailFinal
ASPB Poster 2016-AbigailFinalASPB Poster 2016-AbigailFinal
ASPB Poster 2016-AbigailFinal
Abigail Miller
 
Science 2013-schuenemann-179-83 leprosy önemli
Science 2013-schuenemann-179-83 leprosy önemliScience 2013-schuenemann-179-83 leprosy önemli
Science 2013-schuenemann-179-83 leprosy önemli
Hazal Sav
 
MSBMB 2016 conference poster
MSBMB 2016 conference posterMSBMB 2016 conference poster
MSBMB 2016 conference poster
Nasiru Abdullahi
 
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
theijes
 
Gonzalez et al., JACS 2011, 133, 5500-5507
Gonzalez et al., JACS 2011, 133, 5500-5507Gonzalez et al., JACS 2011, 133, 5500-5507
Gonzalez et al., JACS 2011, 133, 5500-5507
Vincent M
 
Gene Expression in Arabidopsis
Gene Expression in ArabidopsisGene Expression in Arabidopsis
Gene Expression in Arabidopsis
C.B. Wolf
 
STARS Poster (1-2016)
STARS Poster (1-2016)STARS Poster (1-2016)
STARS Poster (1-2016)
Reyan Coskun
 

Similar to Midsure poster 2015 (20)

ASPB Poster 2016-AbigailFinal
ASPB Poster 2016-AbigailFinalASPB Poster 2016-AbigailFinal
ASPB Poster 2016-AbigailFinal
 
Poster Presentation
Poster PresentationPoster Presentation
Poster Presentation
 
ProteinSci2007
ProteinSci2007ProteinSci2007
ProteinSci2007
 
steroidal alkaloids.pptx
steroidal alkaloids.pptxsteroidal alkaloids.pptx
steroidal alkaloids.pptx
 
Science 2013-schuenemann-179-83 leprosy önemli
Science 2013-schuenemann-179-83 leprosy önemliScience 2013-schuenemann-179-83 leprosy önemli
Science 2013-schuenemann-179-83 leprosy önemli
 
Articulo6 gene cloning of glucosyltransferase
Articulo6 gene cloning of glucosyltransferaseArticulo6 gene cloning of glucosyltransferase
Articulo6 gene cloning of glucosyltransferase
 
ol902123h
ol902123hol902123h
ol902123h
 
ol902123h
ol902123hol902123h
ol902123h
 
MSBMB 2016 conference poster
MSBMB 2016 conference posterMSBMB 2016 conference poster
MSBMB 2016 conference poster
 
Ablooglu et al JBC 2000
Ablooglu et al JBC 2000Ablooglu et al JBC 2000
Ablooglu et al JBC 2000
 
Flavocytochrome p450 bm3 mutant a264 e undergoes substrate dependent formatio...
Flavocytochrome p450 bm3 mutant a264 e undergoes substrate dependent formatio...Flavocytochrome p450 bm3 mutant a264 e undergoes substrate dependent formatio...
Flavocytochrome p450 bm3 mutant a264 e undergoes substrate dependent formatio...
 
OBC- 2013
OBC- 2013OBC- 2013
OBC- 2013
 
Physiological processes influencing grain amino acid profile and its interact...
Physiological processes influencing grain amino acid profile and its interact...Physiological processes influencing grain amino acid profile and its interact...
Physiological processes influencing grain amino acid profile and its interact...
 
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
In-vitro Interaction of αB-Crystallin on Serum Amyloid A and Serum Amyloid A ...
 
Gonzalez et al., JACS 2011, 133, 5500-5507
Gonzalez et al., JACS 2011, 133, 5500-5507Gonzalez et al., JACS 2011, 133, 5500-5507
Gonzalez et al., JACS 2011, 133, 5500-5507
 
Gene Expression in Arabidopsis
Gene Expression in ArabidopsisGene Expression in Arabidopsis
Gene Expression in Arabidopsis
 
STARS Poster (1-2016)
STARS Poster (1-2016)STARS Poster (1-2016)
STARS Poster (1-2016)
 
SHMT_BBA_1994
SHMT_BBA_1994SHMT_BBA_1994
SHMT_BBA_1994
 
Lysine Crotonylation.pptx
Lysine Crotonylation.pptxLysine Crotonylation.pptx
Lysine Crotonylation.pptx
 
Molecular mechanisms regulating storage root formation in plants
Molecular mechanisms regulating storage root formation in plantsMolecular mechanisms regulating storage root formation in plants
Molecular mechanisms regulating storage root formation in plants
 

Midsure poster 2015

  • 1. Variation of the acylsucrose biosynthesis pathway catalyzed by ASAT2 and 3 in wild tomato species Abigail M. Miller1, Pengxiang Fan1, and Robert L. Last1,2 1Department of Biochemistry and Molecular Biology, 2Department of Plant Biology, Michigan State Univeristy, East Lansing, MI 48824, United States of America Background: The acylsucrose biosynthesis pathway is composed of a sucrose backbone with multiple acyl-CoA donors added onto the pyranose and furanose rings. This research shows the variation and manipulation of acyl donors and acyl acceptors between S. lycopersicum, the cultivated tomato, and other wild tomato accessions. Through multiple enzyme assays, and mutagenesis, this research helps develop the framework for manipulation of a secondary pathway and illustrates the natural diversity and evolution of acylsugars in tomato plants. 1 7 4 3 2 S. lycopersicum S. pennellii S1:5 (R4) S2:10 (R2, R4) S2:10 (R3,R4) S3:22 (R2,R3,R4) SpASAT3 SlASAT2 SpASAT2 6 5 8 7 Enzyme S1:5 + iC5 S2:10 + iC5 S2:10 + nC12 SpASAT3 S2:10 X X SlASAT3 X S3:15 S3:22 1376SpASAT3 S2:10 X X 1278SpeASAT3_1 S2:10 S3:15 S3:22 1718ShASAT3 S2:10 S3:15 S3:22 1969SchASAT3 S2:10 S3:15 S3:22 1278SpeASAT3_2 S2:10 S3:15 S3:22 1364ShuASAT3 S2:10 S3:15 S3:22 2172SaASAT3 X S3:15 X Common acylsugar structure found in S. lycopersicum. Acyl chains added by ASAT2 on the R3 position, and by ASAT3 on the R2 position of the pyranose ring (Kim 2010). Acylsugars are a natural pesticide for the tomato plant. Hornworm larvae on tobacco plants eat acylsugars as a first meal, and are tagged with volatile components which attract predators (Weinhold 2011). Protein homology model used to find amino acids for mutagenesis to test ASAT2 activity. Phe408Val results in a gain of activity shown in the chromatogram below. Pathway difference between S. lycopersicum and S. pennellii. S. pennellii acylsugars have a completely acylated pyranose ring, and no acyl chains on the furanose ring (Schilmiller 2015). Multiple sequence alignment (MSA) of ASAT3 in wild tomatoes, G to C aligns with the activity of S. lycopersicum differing from S. pennellii when using S1:5 as a substrate. SlASAT2 SlASAT2_C304G 1777ASAT2 Mutagenesis of C304G ASAT2 which gains activity to use S2:10 as a substrate. iC5-CoA aiC5-CoA nC12-CoA SpASAT2_HC-QY SlASAT3_YCT-HSV S1:5(R4) +iC5-CoA Mutagenesis of SlASAT3 gains the activity to use S1:5(R4) as a substrate. Mutations found using the same method as demonstrated in section 4. What about S. pennellii ASAT3 using S2:10? SlASAT2_C304G SpASAT2_HC-QY SlASAT3_YCT-HSV Activity of ASAT3 in wild tomatoes and S. lycopersicum was tested in order to find a correlation for SpASAT3 using S2:10. Species were selected based on sequence alignment resembling both S. lycopersicum and S. pennellii activity. Future Work References and Acknowledgements Retention time for S3:22 is shifted for 1718ShASAT3 which indicates that the nC12-CoA is added on at a different position on the furanose ring. The original position is on the R3’, but this shows that it is somewhere new. 1969SpASAT3 1278SpeASAT3 1777ShASAT3 The NSF for funding the Trichome project, Lyman Briggs College for Spring 2015 research scholarships, and ASPB for funding Summer 2015 research. Schilmiller AL, Charbonneau AL, Last RL (2012a) Identification of a BAHD acetyltransferase that produces protective acyl sugars in tomato trichomes. Proc Natl Acad Sci USA 109:16377-82. Weinhold A, Baldwin IT (2011) Trichome-derived O-acyl sugars are a first meal for caterpillars that tags them for predation. Proc Natl Acad USA 108: 7855- 7859. Kim J, Kang K, Gonzales-Vigil E. Shi F, Jones AD, Barry CS, Last RL (2012) Striking natural diversity in glandular trichome acylsugar composition is shaped by variation at the Acyltransferase2 locus in the wild tomato Solanum habrochaites. Plant Physiol 160:1854-70. Schillmiller A, Shi F, Kim J, Charbonneau AL, Holmes D, Jones AD, Last RL (2010) Mass spectrometry screening reveals widespread diversity in trichome specialized metabolites of tomato chromosomal substitution lines. Plant J 62: 391-403. Schilmiller AL, Moghe GD, Fan P, Ghosh B, Ning J, Jones AD, Last RL (2015) Functionally Divergent Alleles and Duplicated Loci Encoding an Acyltransferase Contribute to Acylsugar Metabolite Diversity in Solanum Trichomes. Plant Cell. Doi: 10.1105/tpc.15.00087 Ghosh B, Westbrook T, Jones AD. 2013. Comparative structural profiling of trichome specialized metabolites in tomato (Solanum lycopersicum) and S. habrochaites: acylsugar profiles revealed by UHPLC/MS and NMR. Metabolomics: 1-12. Alignments of the S. pennellii and the wild tomato species will help us understand the evolutionary significance of this pathway divergence. Analyzing the retention time differences in section 8 will need to be conducted and NMR structures will also need to be developed. Summary of the three mutations Acyl-acceptor mutagenesis Proposed acylsucrose pathway Mutagenesis with three mutations ASAT2 acyl-donor mutagenesis What about SpASAT3 using S2:10?Mutagenesis HC135QY S3:15 S4:17 2172ASAT2_V408F 2172ASAT2 SlASAT2_F408V SlASAT2 - - - - - + + + + + - - - - ASAT2 ASAT3 S1:5 S1:5 S1:5 as substrate Mutations found through a similar MSA method as in section 4.