SlideShare a Scribd company logo
1 of 33
Global change, parasites, and community assembly: How a parasite expanded its range in the shadow of its host Yi-Hsin Erica Tsai Paul S. Manos Department of Biology Duke University
Climate change and a species’ response
Climate change and a species’ response Climate change
Climate change and a species’ response Climate change
Climate change and a species’ response Climate change
Climate change and a species’ response Climate change ?
Climate change and a community’s response
Climate change and a community’s response
Climate change and a community’s response Climate change
Climate change and a community’s response Climate change
Climate change and a community’s response Climate change ?
How do host and parasite migration patterns compare? What host life history characters act as constraints?
How do host and parasite migration patterns compare? What host life history characters act as constraints? Host = American beech,  Fagus grandifolia Parasite = Beechdrop,  Epifagus virginiana Host density effects
The parasite:  Epifagus virginiana DL Nickrent Obligate parasite Non-photosynthetic Host specific to  Fagus grandifolia Annual Selfer EA Saulys
Two host migration scenarios 13  kybp 9  kybp 6  kybp Host fossil pollen Davis 1983, Bennett 1985,  Delcourt and Delcourt 1987, Williams et al. 2004
Two host migration scenarios Host cpDNA  McLachlan et al. 2005 13  kybp 9  kybp 6  kybp PP Prairie Peninsula
Two host migration scenarios Host fossil pollen Davis 1983, Bennett 1985,  Delcourt and Delcourt 1987, Williams et al. 2004 Host cpDNA  McLachlan et al. 2005 PP 13  kybp 9  kybp 6  kybp
Two host migration scenarios Host fossil pollen Host cpDNA  PP 13  kybp 9  kybp 6  kybp High density forest development Initial range expansion
What limits parasite colonization of a new area? Host fossil pollen = host density Host cpDNA  = host disperal PP 13  kybp 9  kybp 6  kybp
Methods: Building a parasite dataset 1064 specimens 95 populations 1016 cpDNA bp 557 bp  clpP1  intron 459 bp  rbcL  pseudogene 47 substitutions 41 haplotypes 4 haplotype groups
Parasite haplotype distributions PP 13  kybp 9  kybp 6  kybp
Many genetic breaks in the South Monmonier’s analysis: Manni et al. 2004, Miller 2005,  Jombart 2008
Many genetic breaks in the South - Supported by cross validation analysis
Migration into the Midwest Probability Migration rate 0.005 0.015 0.025 1 100 0.01 PP PP 13  kybp 9  kybp 6  kybp 13  kybp 9  kybp Hey and Nielsen 2007
Broad-scale story X Host density matters
But where are the actual migration corridors?
But where are the actual migration corridors? ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Locating migration corridors Landscape connectivity - McRae et al. 2008
Spatial models with all datasets Parasite cpDNA ~ Host pollen age + Host cpDNA
Climate change and a community’s response Climate change ?
Climate change and a community’s response Climate change ?
Acknowledgements Specimen collectors: Yi-Show Tsai Ross McCauley  Chuck Williams Fritz Gerhardt Gelyn Kline Jason McLachlan John Freudenstein Maggie Whitson Paul Manos Mark Fishbein Dan Nickrent Heather Nickrent Philip Hyatt Robyn Burnham Sally Gerhardt Sasa Stefanovic Alison Colwell Erin Tripp Jordan Metzgar Jackson Fox Funding sources: NSF, Sigma Xi, Duke Grad School, Duke Dept. of Biology, ASPT, Mellon Foundation, AWIS, GWIS, Deep Time, Google, NESCent Lab/Theory help: Billy Schnackel Amos Little  Jason McLachlan Sang-Hun Oh Norm Douglas Dylan O. Burge Erin Tripp Taina Price Dudu Meireles James Beck Christy Henzler Lisa Pokorny Michelle Hersh Sara Chun Advisor: Paul Manos
Questions? [email_address] www.duke.edu/~yet2/ phylogeoviz.org

More Related Content

What's hot

Santos et al 2013 J Gen
Santos et al 2013 J GenSantos et al 2013 J Gen
Santos et al 2013 J Gen
Josiane Santos
 
22.4 powerpoint
22.4 powerpoint22.4 powerpoint
22.4 powerpoint
dkavuru
 

What's hot (20)

Genetic drift
Genetic driftGenetic drift
Genetic drift
 
Santos et al 2013 J Gen
Santos et al 2013 J GenSantos et al 2013 J Gen
Santos et al 2013 J Gen
 
Mutation & genetic drift
Mutation & genetic driftMutation & genetic drift
Mutation & genetic drift
 
Genetic drift & hardy weinberg equilibrium
Genetic drift & hardy weinberg equilibriumGenetic drift & hardy weinberg equilibrium
Genetic drift & hardy weinberg equilibrium
 
Genetic drift
Genetic drift Genetic drift
Genetic drift
 
22.4 powerpoint
22.4 powerpoint22.4 powerpoint
22.4 powerpoint
 
06 random drift
06 random drift06 random drift
06 random drift
 
The deviation in hardy weinberg equilibrium
The deviation in hardy weinberg equilibriumThe deviation in hardy weinberg equilibrium
The deviation in hardy weinberg equilibrium
 
Rates and trends of evolution
Rates and trends of evolutionRates and trends of evolution
Rates and trends of evolution
 
Mutation and genetic drift
Mutation and genetic driftMutation and genetic drift
Mutation and genetic drift
 
Metapop Case Study
Metapop Case StudyMetapop Case Study
Metapop Case Study
 
Biol205 lab5 introduction
Biol205 lab5 introductionBiol205 lab5 introduction
Biol205 lab5 introduction
 
JBryant_Poster2016
JBryant_Poster2016JBryant_Poster2016
JBryant_Poster2016
 
EMAC Tide Pools
EMAC Tide PoolsEMAC Tide Pools
EMAC Tide Pools
 
Paper wasps are darker at high elevation
Paper wasps are darker at high elevationPaper wasps are darker at high elevation
Paper wasps are darker at high elevation
 
Exploring the effects of climate change on marine species using linked data
Exploring the effects of climate change on marine species using linked dataExploring the effects of climate change on marine species using linked data
Exploring the effects of climate change on marine species using linked data
 
Our environment part 2
Our environment part 2Our environment part 2
Our environment part 2
 
EASTERN HELLBENDER (CRYPTOBRANCHUS ALLEGANIENSIS) CURRENT AND FUTURE RESEARCH...
EASTERN HELLBENDER (CRYPTOBRANCHUS ALLEGANIENSIS) CURRENT AND FUTURE RESEARCH...EASTERN HELLBENDER (CRYPTOBRANCHUS ALLEGANIENSIS) CURRENT AND FUTURE RESEARCH...
EASTERN HELLBENDER (CRYPTOBRANCHUS ALLEGANIENSIS) CURRENT AND FUTURE RESEARCH...
 
Notes genetic drift
Notes genetic driftNotes genetic drift
Notes genetic drift
 
Condition, survivial and reproduction of barn swallows from chernobyl
Condition, survivial and reproduction of barn swallows from chernobylCondition, survivial and reproduction of barn swallows from chernobyl
Condition, survivial and reproduction of barn swallows from chernobyl
 

Similar to Global change, parasites, and community assembly: How a parasite expanded its range in the shadow of its host

Hertweck Evolution 2017
Hertweck Evolution 2017Hertweck Evolution 2017
Hertweck Evolution 2017
Kate Hertweck
 

Similar to Global change, parasites, and community assembly: How a parasite expanded its range in the shadow of its host (20)

Effects of density on spacing patterns and habitat associations of a Neotropi...
Effects of density on spacing patterns and habitat associations of a Neotropi...Effects of density on spacing patterns and habitat associations of a Neotropi...
Effects of density on spacing patterns and habitat associations of a Neotropi...
 
Open Science and Ecological meta-anlaysis
Open Science and Ecological meta-anlaysisOpen Science and Ecological meta-anlaysis
Open Science and Ecological meta-anlaysis
 
Molecular Cytogenetics - HYM Mohan Ram Heslop-Harrison Delhi
Molecular Cytogenetics - HYM Mohan Ram Heslop-Harrison DelhiMolecular Cytogenetics - HYM Mohan Ram Heslop-Harrison Delhi
Molecular Cytogenetics - HYM Mohan Ram Heslop-Harrison Delhi
 
Microbial Metagenomics Drives a New Cyberinfrastructure
Microbial Metagenomics Drives a New CyberinfrastructureMicrobial Metagenomics Drives a New Cyberinfrastructure
Microbial Metagenomics Drives a New Cyberinfrastructure
 
Big Data Field Museum
Big Data Field MuseumBig Data Field Museum
Big Data Field Museum
 
Building a Community Cyberinfrastructure to Support Marine Microbial Ecology ...
Building a Community Cyberinfrastructure to Support Marine Microbial Ecology ...Building a Community Cyberinfrastructure to Support Marine Microbial Ecology ...
Building a Community Cyberinfrastructure to Support Marine Microbial Ecology ...
 
Global repeated replacement of bacterial symbionts by fungal pathogens in cic...
Global repeated replacement of bacterial symbionts by fungal pathogens in cic...Global repeated replacement of bacterial symbionts by fungal pathogens in cic...
Global repeated replacement of bacterial symbionts by fungal pathogens in cic...
 
Open Data and Ecological and Evolutionary synthesis
Open Data and Ecological and Evolutionary synthesisOpen Data and Ecological and Evolutionary synthesis
Open Data and Ecological and Evolutionary synthesis
 
UC Davis EVE161 Lecture 17 by @phylogenomics
 UC Davis EVE161 Lecture 17 by @phylogenomics UC Davis EVE161 Lecture 17 by @phylogenomics
UC Davis EVE161 Lecture 17 by @phylogenomics
 
McAllister et al
McAllister et alMcAllister et al
McAllister et al
 
Rick Stevens: Prospects for a Systematic Exploration of Earths Microbial Dive...
Rick Stevens: Prospects for a Systematic Exploration of Earths Microbial Dive...Rick Stevens: Prospects for a Systematic Exploration of Earths Microbial Dive...
Rick Stevens: Prospects for a Systematic Exploration of Earths Microbial Dive...
 
Genotype-By-Environment Interaction (VG X E) wth Examples
Genotype-By-Environment Interaction (VG X E)  wth ExamplesGenotype-By-Environment Interaction (VG X E)  wth Examples
Genotype-By-Environment Interaction (VG X E) wth Examples
 
Hertweck Evolution 2017
Hertweck Evolution 2017Hertweck Evolution 2017
Hertweck Evolution 2017
 
Recent acceleration of human adaptive evolution
Recent acceleration of human adaptive evolutionRecent acceleration of human adaptive evolution
Recent acceleration of human adaptive evolution
 
Jack Gilbert: Welcome to the 1st International EMP Meeting: the first 10,000 ...
Jack Gilbert: Welcome to the 1st International EMP Meeting: the first 10,000 ...Jack Gilbert: Welcome to the 1st International EMP Meeting: the first 10,000 ...
Jack Gilbert: Welcome to the 1st International EMP Meeting: the first 10,000 ...
 
Hoofdstuk 16 2008 deel 1
Hoofdstuk 16 2008 deel 1Hoofdstuk 16 2008 deel 1
Hoofdstuk 16 2008 deel 1
 
Unique pages in the cat's book
Unique pages in the cat's bookUnique pages in the cat's book
Unique pages in the cat's book
 
Marine Host-Microbiome Interactions: Challenges and Opportunities
Marine Host-Microbiome Interactions: Challenges and OpportunitiesMarine Host-Microbiome Interactions: Challenges and Opportunities
Marine Host-Microbiome Interactions: Challenges and Opportunities
 
Quantifying Your Superorganism Body Using Big Data Supercomputing
Quantifying Your Superorganism Body Using Big Data SupercomputingQuantifying Your Superorganism Body Using Big Data Supercomputing
Quantifying Your Superorganism Body Using Big Data Supercomputing
 
chap23 (1).ppt
chap23 (1).pptchap23 (1).ppt
chap23 (1).ppt
 

Recently uploaded

Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
ZurliaSoop
 

Recently uploaded (20)

Food safety_Challenges food safety laboratories_.pdf
Food safety_Challenges food safety laboratories_.pdfFood safety_Challenges food safety laboratories_.pdf
Food safety_Challenges food safety laboratories_.pdf
 
Fostering Friendships - Enhancing Social Bonds in the Classroom
Fostering Friendships - Enhancing Social Bonds  in the ClassroomFostering Friendships - Enhancing Social Bonds  in the Classroom
Fostering Friendships - Enhancing Social Bonds in the Classroom
 
On National Teacher Day, meet the 2024-25 Kenan Fellows
On National Teacher Day, meet the 2024-25 Kenan FellowsOn National Teacher Day, meet the 2024-25 Kenan Fellows
On National Teacher Day, meet the 2024-25 Kenan Fellows
 
SOC 101 Demonstration of Learning Presentation
SOC 101 Demonstration of Learning PresentationSOC 101 Demonstration of Learning Presentation
SOC 101 Demonstration of Learning Presentation
 
ICT Role in 21st Century Education & its Challenges.pptx
ICT Role in 21st Century Education & its Challenges.pptxICT Role in 21st Century Education & its Challenges.pptx
ICT Role in 21st Century Education & its Challenges.pptx
 
Making communications land - Are they received and understood as intended? we...
Making communications land - Are they received and understood as intended? we...Making communications land - Are they received and understood as intended? we...
Making communications land - Are they received and understood as intended? we...
 
Key note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdfKey note speaker Neum_Admir Softic_ENG.pdf
Key note speaker Neum_Admir Softic_ENG.pdf
 
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
Jual Obat Aborsi Hongkong ( Asli No.1 ) 085657271886 Obat Penggugur Kandungan...
 
ComPTIA Overview | Comptia Security+ Book SY0-701
ComPTIA Overview | Comptia Security+ Book SY0-701ComPTIA Overview | Comptia Security+ Book SY0-701
ComPTIA Overview | Comptia Security+ Book SY0-701
 
How to Create and Manage Wizard in Odoo 17
How to Create and Manage Wizard in Odoo 17How to Create and Manage Wizard in Odoo 17
How to Create and Manage Wizard in Odoo 17
 
Understanding Accommodations and Modifications
Understanding  Accommodations and ModificationsUnderstanding  Accommodations and Modifications
Understanding Accommodations and Modifications
 
Towards a code of practice for AI in AT.pptx
Towards a code of practice for AI in AT.pptxTowards a code of practice for AI in AT.pptx
Towards a code of practice for AI in AT.pptx
 
Single or Multiple melodic lines structure
Single or Multiple melodic lines structureSingle or Multiple melodic lines structure
Single or Multiple melodic lines structure
 
Application orientated numerical on hev.ppt
Application orientated numerical on hev.pptApplication orientated numerical on hev.ppt
Application orientated numerical on hev.ppt
 
How to Give a Domain for a Field in Odoo 17
How to Give a Domain for a Field in Odoo 17How to Give a Domain for a Field in Odoo 17
How to Give a Domain for a Field in Odoo 17
 
ICT role in 21st century education and it's challenges.
ICT role in 21st century education and it's challenges.ICT role in 21st century education and it's challenges.
ICT role in 21st century education and it's challenges.
 
Unit-IV; Professional Sales Representative (PSR).pptx
Unit-IV; Professional Sales Representative (PSR).pptxUnit-IV; Professional Sales Representative (PSR).pptx
Unit-IV; Professional Sales Representative (PSR).pptx
 
UGC NET Paper 1 Mathematical Reasoning & Aptitude.pdf
UGC NET Paper 1 Mathematical Reasoning & Aptitude.pdfUGC NET Paper 1 Mathematical Reasoning & Aptitude.pdf
UGC NET Paper 1 Mathematical Reasoning & Aptitude.pdf
 
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
Explore beautiful and ugly buildings. Mathematics helps us create beautiful d...
 
Spatium Project Simulation student brief
Spatium Project Simulation student briefSpatium Project Simulation student brief
Spatium Project Simulation student brief
 

Global change, parasites, and community assembly: How a parasite expanded its range in the shadow of its host

  • 1. Global change, parasites, and community assembly: How a parasite expanded its range in the shadow of its host Yi-Hsin Erica Tsai Paul S. Manos Department of Biology Duke University
  • 2. Climate change and a species’ response
  • 3. Climate change and a species’ response Climate change
  • 4. Climate change and a species’ response Climate change
  • 5. Climate change and a species’ response Climate change
  • 6. Climate change and a species’ response Climate change ?
  • 7. Climate change and a community’s response
  • 8. Climate change and a community’s response
  • 9. Climate change and a community’s response Climate change
  • 10. Climate change and a community’s response Climate change
  • 11. Climate change and a community’s response Climate change ?
  • 12. How do host and parasite migration patterns compare? What host life history characters act as constraints?
  • 13. How do host and parasite migration patterns compare? What host life history characters act as constraints? Host = American beech, Fagus grandifolia Parasite = Beechdrop, Epifagus virginiana Host density effects
  • 14. The parasite: Epifagus virginiana DL Nickrent Obligate parasite Non-photosynthetic Host specific to Fagus grandifolia Annual Selfer EA Saulys
  • 15. Two host migration scenarios 13 kybp 9 kybp 6 kybp Host fossil pollen Davis 1983, Bennett 1985, Delcourt and Delcourt 1987, Williams et al. 2004
  • 16. Two host migration scenarios Host cpDNA McLachlan et al. 2005 13 kybp 9 kybp 6 kybp PP Prairie Peninsula
  • 17. Two host migration scenarios Host fossil pollen Davis 1983, Bennett 1985, Delcourt and Delcourt 1987, Williams et al. 2004 Host cpDNA McLachlan et al. 2005 PP 13 kybp 9 kybp 6 kybp
  • 18. Two host migration scenarios Host fossil pollen Host cpDNA PP 13 kybp 9 kybp 6 kybp High density forest development Initial range expansion
  • 19. What limits parasite colonization of a new area? Host fossil pollen = host density Host cpDNA = host disperal PP 13 kybp 9 kybp 6 kybp
  • 20. Methods: Building a parasite dataset 1064 specimens 95 populations 1016 cpDNA bp 557 bp clpP1 intron 459 bp rbcL pseudogene 47 substitutions 41 haplotypes 4 haplotype groups
  • 21. Parasite haplotype distributions PP 13 kybp 9 kybp 6 kybp
  • 22. Many genetic breaks in the South Monmonier’s analysis: Manni et al. 2004, Miller 2005, Jombart 2008
  • 23. Many genetic breaks in the South - Supported by cross validation analysis
  • 24. Migration into the Midwest Probability Migration rate 0.005 0.015 0.025 1 100 0.01 PP PP 13 kybp 9 kybp 6 kybp 13 kybp 9 kybp Hey and Nielsen 2007
  • 25. Broad-scale story X Host density matters
  • 26. But where are the actual migration corridors?
  • 27.
  • 28. Locating migration corridors Landscape connectivity - McRae et al. 2008
  • 29. Spatial models with all datasets Parasite cpDNA ~ Host pollen age + Host cpDNA
  • 30. Climate change and a community’s response Climate change ?
  • 31. Climate change and a community’s response Climate change ?
  • 32. Acknowledgements Specimen collectors: Yi-Show Tsai Ross McCauley Chuck Williams Fritz Gerhardt Gelyn Kline Jason McLachlan John Freudenstein Maggie Whitson Paul Manos Mark Fishbein Dan Nickrent Heather Nickrent Philip Hyatt Robyn Burnham Sally Gerhardt Sasa Stefanovic Alison Colwell Erin Tripp Jordan Metzgar Jackson Fox Funding sources: NSF, Sigma Xi, Duke Grad School, Duke Dept. of Biology, ASPT, Mellon Foundation, AWIS, GWIS, Deep Time, Google, NESCent Lab/Theory help: Billy Schnackel Amos Little Jason McLachlan Sang-Hun Oh Norm Douglas Dylan O. Burge Erin Tripp Taina Price Dudu Meireles James Beck Christy Henzler Lisa Pokorny Michelle Hersh Sara Chun Advisor: Paul Manos