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第2回LinkedData勉強会@yayamamo
- 5. ✤
(PubMed 2000 / )
✤
✤
PC: personal computer, primary care, prostate cancer, ...
Alcoholic chronic pancreatitis: ACP, alcoholic CP, ...
Year
- 6. ✤
(PubMed 2000 / )
✤
✤
PC: personal computer, primary care, prostate cancer, ...
Alcoholic chronic pancreatitis: ACP, alcoholic CP, ...
Year
- 8. 2000
polymerase chain reaction
PCR
Fourier transform infrared
FTIR
scanning electron microscopy
SEM
MEDLINE
1000
- 9. Allie
✤
mammalian target of rapamycin /
✤
Neoplasms / ,
✤
mTOR - (1995) Mechanism of action of rapamycin: new insights into the
regulation of G1-phase progression in eukaryotic cells.
✤ ( )
mTOR - PI3K, AMPK, S6K1, ...
- 11. ✤ ftp
✤
✤ API
✤ SOAP / REST
- 16. —
PairCluster
ShortForm LongForm
SPF specific pathogen-free
appearsIn PubMedIDList
contains
CoocurringShort
cooccursWith
PairList FormList
Pair
ShortForm LongForm
SPF specific pathogen-free inResearch
AreaOf
ResearchArea
Pair
ShortForm LongForm
spf specified pathogen free
frequency
- 19. Domain Object property Range
Pair appearsIn PubMedList
PairCluster contains PairList
Pair cooccursWith CooccurringShortFormList
Pair hasLongFormOf LongForm
PairCluster hasLongFormRepresentationOf LongForm
hasMemberOf
Pair hasShortFormOf ShortForm
PairCluster hasShortFormRepresentationOf ShortForm
Pair inResearchAreaOf ResearchArea
- 20. 9000
11G ( )
443M (gziped)
134 ( )
—
1400 ( )
- 21. Virtuoso vs. OWLIM-SE
OpenLink Virtuoso version 06.01.3127, Standard Edition
OWLIM-SE 4.0 / OpenRDF Workbench 2.4.0
Virtuoso OWLIM-SE
50 3
SPARQL
SPARQL ○ ?
- 22. PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf:<http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX xsd:<http://www.w3.org/2001/XMLSchema#>
PREFIX allie:<http://purl.org/allie/ontology/201102#>
select distinct ?F ?lfr ?L ?lf where {
[] a allie:PairCluster;
allie:contains [
allie:hasMemberOf [
allie:hasLongFormOf [
rdfs:label ?lf;
allie:frequency ?lfr ];
]];
allie:frequency ?F;
allie:hasShortFormRepresentationOf [ rdfs:label "SPF"@EN ];
allie:hasLongFormRepresentationOf [ rdfs:label ?L ].
FILTER ( lang(?L) = "en" && lang(?lf) = "en" )
}
ORDER BY DESC(xsd:integer(?F)) DESC(xsd:integer(?lfr))
- 23. PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf:<http://www.w3.org/1999/02/22-rdf-syntax-ns#>
PREFIX xsd:<http://www.w3.org/2001/XMLSchema#>
PREFIX allie: <http://purl.org/allie/ontology/201102#>
select ?SF ?LF ?freq where {
[] a allie:PairCluster;
allie:frequency ?freq;
allie:contains [
allie:hasMemberOf [
allie:hasShortFormOf [
rdfs:label ?SF ];
allie:hasLongFormOf [
rdfs:label ?LF ];
]].
FILTER (xsd:integer(?freq) > 10
&& !regex(?SF,"^s","i")
&& regex(?LF, "^specific", "i"))
}
ORDER BY DESC (xsd:integer(?freq))
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