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Research group Expertise
                                         Design and development of therapeutic peptides
                                                                                                 from bench to market


  Introduction
  Since 2003, the Group of Therapeutic Peptides (University of Barcelona) carries out research and
  development of new peptide-based chemical entities, from the design stage to preclinical proof of
  concept, with the long term objective of developing them as future drugs and medicines.

  Staff
  The group is formed by two tenured professors of the University of Barcelona: Francesc Rabanal in
  the Department of Organic Chemistry (Faculty of Chemistry) and Yolanda Cajal in the Department
  of Physical Chemistry (Faculty of Pharmacy), together with PhD and master students.


  We Offer technical and scientific expertise in
     Design and synthesis of potential peptide-based therapeutic
      compounds, particularly, membrane-active peptides and                                     Industry focus
      mimetics.                                                                                 Pharmaceutical & Drug Development
                                                                                                Cosmetic
     Purification, characterization and structure elucidation of
                                                                                                Chemical
      peptide-based compounds.
                                                                                                Biotechnology / Biomedicine
     Mechanism of Action studies:                                                              Food Industry
            o    Fluorescence-based experiments, both steady-state
                 and life-time, using covalently labeled lipids and peptides

            o    Monolayers at the air/water interface as a tool to study peptide or protein interaction with
                 the membrane

            o    insertion kinetics at constant pressure/area, pressure/area isotherms, surface potential
                 measurement, and morphology changes by Brewster angle microscopy and atomic force
                 microscopy on solid support (Langmuir-Blodgett films).

     Preparation of liposomes (SUVs, LUVs, GUVs), including labeling, functionalization and
      encapsulation. Characterization of size distribution by light-scattering and determination of Z-
      potential.

     In vitro and in vivo preclinical proof of concept of NCE in an integrated collaboration with other
      teams in the University.

  Facilitites
  The team has full equipped labs in the Department of Organic Chemistry and the Department of Physical
  Chemistry at the University of Barcelona, for chemical synthesis, characterization and study of peptides.
  Equipment is also available for the study of Langmuir films as well as the technology needed to prepare and
  characterize different types of liposomes.

LAB EQUIPMENT
          Analytical and preparative HPLC                             Extruder and high power sonicator for Langmuir films
          MALDI-TOF and ESI mass spectrophotometers                   surface potential devices,
          UV-vis, fluorescence, FT-IR,                                and formation of LB films on solid support for atomic force
          amino acid analysis (at CCiT-UB)                             microscopy (AFM) observation and characterization
          2 steady-state spectrofluorometers (Aminco AB2 and          electronic microscopy (TEM/SEM, cryomicroscopy,CCiT-UB)
           QuantaMaster, Photon Technology Instruments-PTI)            flow cytometry (at CCiT-UB)
           equipped with polarizers,                                   high field NMR (including solid-state, at CCiT-UB),
          a life-time fluorimeter (PTI),                              confocal microscopy (at CCiT-UB)
          last-generation instruments (Nima Technology and KSV),      in vitro and in vivo studies
           with Brewster angle microscope,                             microcalorimetry (at CCiT-UB)

  The team has free access to all sort of scientific and technical instrumentation and facilities of the University
  of Barcelona at the CCiT-UB: http://www.ccit.ub.edu/EN/home.html


                Visit website for additional information: http://www.qo.ub.es/personals/frabanal.htm

          Contact Technology Transfer Office                 @ promocio@fbg.ub.edu                    T. +34 934039900
Research group Expertise
                                      Design and development of therapeutic peptides
                                                                                           from bench to market


                            Francesc Rabanal Anglada                Yolanda     Cajal      has
                            shows, according to the ISI             focused her research in
                            web of knowledge, 79                    the    study      of   the
                            international publications (51          interaction of peptides
                            peer-reviewed articles and              and proteins with lipid
                            reviews) with more than 1300            membranes. In many
                            citations, and an h index of            cases, this interaction
                            23. He has also 6 patents in            defines      subsequent
                            different stages, some of               biological activity of the
them granted and transferred. Visit website for further             peptides, considered of great importance. The analysis of
information: http://www.qo.ub.es/personals/frabanal.htm             those interactions requires of different approaches,
                                                                    including physicochemical, biophysical, chemical and
He has more than 25 years of experience in bioorganic               biological methods.
chemistry and design of peptides and protein models due
to his stays in CID-CSIC (Barcelona), University of                 Her interest on antimicrobial peptides started in 1994,
Barcelona, Zeneca Pharmaceuticals (Macclesfield, UK)                during her postdoctoral research (Department of Chemistry
and the University of Pennsylvania School of Medicine,              and Biochemistry, University of Delaware), being her most
(Johnson Research Foundation, Philadelphia, PA, USA).               important contribution the description of a new biophysical
                                                                    phenomenon: the selective exchange of phospholipids
Francesc Rabanal has directed or co-directed seven Ph.D             between membranes induced by polycationic peptides,
and 12 Masters (M Sc) in chemistry. As a research                   reported initially for the peptide antibiotic polymyxin B (PxB)
professor, he has 3 research "sexenios" (3 six-year                 in 4 papers (impact factors 2.904, 4.008, 4.008, 6.903 JCR),
periods), and 3 teaching "quinquenios" (3 five-year                 with more than 110 citations. This process was proposed as
periods).                                                           the basis of a new mechanism of antibiotic action in Gram
                                                                    negative bacteria, as reported in four communications
As an example of our tech-transfer capabilities, please,            (impact factor 3.441, 3.441, 3.441, 2.904) that have
visit                            http://www.medicamentos-           received more than 100 citations. Once in the University of
innovadores.org/sites/default/files/medinnovadores/Espa             Barcelona, Dr. Cajal continued the research in Antimicrobial
%C3%B1ol/Farma-Biotech/Barcelona_14-03-                             Peptides (AMPs).
2012/Rabanal_14_03_2011_5.pdf
                                                                    She is also member of the group “Peptides and Proteins,
                                                                    physicochemical studies”, (Grupo Consolidado from
                                                                    Generalitat de Catalunya) and of the Instituto de
                                                                    Nanociencia y Nanotecnologia (IN2UB).

                                                                    http://www.ub.edu/fqfar/recerca.php?id_recerca=1&id_cat_r
                                                                    ecerca=2


Research and Tech transfer. Patents & Publications
F. Rabanal*, W. F. DeGrado, y P. L. Dutton. Toward the synthesis of a photosynthetic reaction center maquette: a cofacial
porphyrin pair assembled between two subunits of a synthetic four-helix bundle multiheme Protein. J. Am. Chem. Soc. 118,
473-474 (1996)

Jose J. Pastor, Giovanna Granados, Natalia Carulla, Francesc Rabanal, Ernest Giralt, Redesign of Protein Domains Using
One-Bead-One-Compound Combinatorial Chemistry. J. Am. Chem. Soc , 129, 14922-14932, (2007)

Francesc Rabanal. Nucleophile and base labile resins (chapter 15). The Power of Functional Resins in Organic Synthesis,
F. Albericio & J. Tulla-Puche (Eds), Ed. WILEY VCH Verlag GmbH & Co KGaA, Weinheim, Germany, 2008, ISBN 978-3-
527-31936-7, p 417-36

Adrià Clausell, Maria Garcia-Subirats, Montserrat Pujol, M. Antonia Busquets, Francesc Rabanal, Yolanda Cajal. Gram
negative bacteria outer and inner membrane models: Insertion of cyclic cationic peptides. J. Phys. Chem B, 111, 551-563.
(2007)

Grillo-Bosch, Dolors; Carulla, Natalia; Cruz, Montse; Sanchez, Laia; Pujol-Pina, Rosa; Madurga, Sergio; Rabanal, Francesc;
Giralt, Ernest. retro-enantio N-methylated peptides as beta-amyloid aggregation inhibitors. ChemMedChem, 4, 1488-94,
(2009)

WO 2011 110716               Peptide compounds that can be used as antibacterial agents.
WO 2011 054993               Peptides for the treatment of ocular hypertension and/or glaucoma.
WO 2010 029196               Antibacterial peptide compounds


            Visit website for additional information: http://www.qo.ub.es/personals/frabanal.htm

      Contact Technology Transfer Office                @ promocio@fbg.ub.edu                   T. +34 934039900

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Research group Expertise: DESIGN AND DEVELOPMENT OF THERAPEUTIC PEPTIDES

  • 1. Research group Expertise Design and development of therapeutic peptides from bench to market Introduction Since 2003, the Group of Therapeutic Peptides (University of Barcelona) carries out research and development of new peptide-based chemical entities, from the design stage to preclinical proof of concept, with the long term objective of developing them as future drugs and medicines. Staff The group is formed by two tenured professors of the University of Barcelona: Francesc Rabanal in the Department of Organic Chemistry (Faculty of Chemistry) and Yolanda Cajal in the Department of Physical Chemistry (Faculty of Pharmacy), together with PhD and master students. We Offer technical and scientific expertise in  Design and synthesis of potential peptide-based therapeutic compounds, particularly, membrane-active peptides and Industry focus mimetics. Pharmaceutical & Drug Development Cosmetic  Purification, characterization and structure elucidation of Chemical peptide-based compounds. Biotechnology / Biomedicine  Mechanism of Action studies: Food Industry o Fluorescence-based experiments, both steady-state and life-time, using covalently labeled lipids and peptides o Monolayers at the air/water interface as a tool to study peptide or protein interaction with the membrane o insertion kinetics at constant pressure/area, pressure/area isotherms, surface potential measurement, and morphology changes by Brewster angle microscopy and atomic force microscopy on solid support (Langmuir-Blodgett films).  Preparation of liposomes (SUVs, LUVs, GUVs), including labeling, functionalization and encapsulation. Characterization of size distribution by light-scattering and determination of Z- potential.  In vitro and in vivo preclinical proof of concept of NCE in an integrated collaboration with other teams in the University. Facilitites The team has full equipped labs in the Department of Organic Chemistry and the Department of Physical Chemistry at the University of Barcelona, for chemical synthesis, characterization and study of peptides. Equipment is also available for the study of Langmuir films as well as the technology needed to prepare and characterize different types of liposomes. LAB EQUIPMENT  Analytical and preparative HPLC  Extruder and high power sonicator for Langmuir films  MALDI-TOF and ESI mass spectrophotometers  surface potential devices,  UV-vis, fluorescence, FT-IR,  and formation of LB films on solid support for atomic force  amino acid analysis (at CCiT-UB) microscopy (AFM) observation and characterization  2 steady-state spectrofluorometers (Aminco AB2 and  electronic microscopy (TEM/SEM, cryomicroscopy,CCiT-UB) QuantaMaster, Photon Technology Instruments-PTI)  flow cytometry (at CCiT-UB) equipped with polarizers,  high field NMR (including solid-state, at CCiT-UB),  a life-time fluorimeter (PTI),  confocal microscopy (at CCiT-UB)  last-generation instruments (Nima Technology and KSV),  in vitro and in vivo studies with Brewster angle microscope,  microcalorimetry (at CCiT-UB) The team has free access to all sort of scientific and technical instrumentation and facilities of the University of Barcelona at the CCiT-UB: http://www.ccit.ub.edu/EN/home.html Visit website for additional information: http://www.qo.ub.es/personals/frabanal.htm Contact Technology Transfer Office @ promocio@fbg.ub.edu T. +34 934039900
  • 2. Research group Expertise Design and development of therapeutic peptides from bench to market Francesc Rabanal Anglada Yolanda Cajal has shows, according to the ISI focused her research in web of knowledge, 79 the study of the international publications (51 interaction of peptides peer-reviewed articles and and proteins with lipid reviews) with more than 1300 membranes. In many citations, and an h index of cases, this interaction 23. He has also 6 patents in defines subsequent different stages, some of biological activity of the them granted and transferred. Visit website for further peptides, considered of great importance. The analysis of information: http://www.qo.ub.es/personals/frabanal.htm those interactions requires of different approaches, including physicochemical, biophysical, chemical and He has more than 25 years of experience in bioorganic biological methods. chemistry and design of peptides and protein models due to his stays in CID-CSIC (Barcelona), University of Her interest on antimicrobial peptides started in 1994, Barcelona, Zeneca Pharmaceuticals (Macclesfield, UK) during her postdoctoral research (Department of Chemistry and the University of Pennsylvania School of Medicine, and Biochemistry, University of Delaware), being her most (Johnson Research Foundation, Philadelphia, PA, USA). important contribution the description of a new biophysical phenomenon: the selective exchange of phospholipids Francesc Rabanal has directed or co-directed seven Ph.D between membranes induced by polycationic peptides, and 12 Masters (M Sc) in chemistry. As a research reported initially for the peptide antibiotic polymyxin B (PxB) professor, he has 3 research "sexenios" (3 six-year in 4 papers (impact factors 2.904, 4.008, 4.008, 6.903 JCR), periods), and 3 teaching "quinquenios" (3 five-year with more than 110 citations. This process was proposed as periods). the basis of a new mechanism of antibiotic action in Gram negative bacteria, as reported in four communications As an example of our tech-transfer capabilities, please, (impact factor 3.441, 3.441, 3.441, 2.904) that have visit http://www.medicamentos- received more than 100 citations. Once in the University of innovadores.org/sites/default/files/medinnovadores/Espa Barcelona, Dr. Cajal continued the research in Antimicrobial %C3%B1ol/Farma-Biotech/Barcelona_14-03- Peptides (AMPs). 2012/Rabanal_14_03_2011_5.pdf She is also member of the group “Peptides and Proteins, physicochemical studies”, (Grupo Consolidado from Generalitat de Catalunya) and of the Instituto de Nanociencia y Nanotecnologia (IN2UB). http://www.ub.edu/fqfar/recerca.php?id_recerca=1&id_cat_r ecerca=2 Research and Tech transfer. Patents & Publications F. Rabanal*, W. F. DeGrado, y P. L. Dutton. Toward the synthesis of a photosynthetic reaction center maquette: a cofacial porphyrin pair assembled between two subunits of a synthetic four-helix bundle multiheme Protein. J. Am. Chem. Soc. 118, 473-474 (1996) Jose J. Pastor, Giovanna Granados, Natalia Carulla, Francesc Rabanal, Ernest Giralt, Redesign of Protein Domains Using One-Bead-One-Compound Combinatorial Chemistry. J. Am. Chem. Soc , 129, 14922-14932, (2007) Francesc Rabanal. Nucleophile and base labile resins (chapter 15). The Power of Functional Resins in Organic Synthesis, F. Albericio & J. Tulla-Puche (Eds), Ed. WILEY VCH Verlag GmbH & Co KGaA, Weinheim, Germany, 2008, ISBN 978-3- 527-31936-7, p 417-36 Adrià Clausell, Maria Garcia-Subirats, Montserrat Pujol, M. Antonia Busquets, Francesc Rabanal, Yolanda Cajal. Gram negative bacteria outer and inner membrane models: Insertion of cyclic cationic peptides. J. Phys. Chem B, 111, 551-563. (2007) Grillo-Bosch, Dolors; Carulla, Natalia; Cruz, Montse; Sanchez, Laia; Pujol-Pina, Rosa; Madurga, Sergio; Rabanal, Francesc; Giralt, Ernest. retro-enantio N-methylated peptides as beta-amyloid aggregation inhibitors. ChemMedChem, 4, 1488-94, (2009) WO 2011 110716 Peptide compounds that can be used as antibacterial agents. WO 2011 054993 Peptides for the treatment of ocular hypertension and/or glaucoma. WO 2010 029196 Antibacterial peptide compounds Visit website for additional information: http://www.qo.ub.es/personals/frabanal.htm Contact Technology Transfer Office @ promocio@fbg.ub.edu T. +34 934039900