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Lecture 2
Isomerism. Mutual influence of
atoms in the molecules of
organic compounds
Isomerism is
the phenomenon of the existence of chemicals that have the
same quantitative and qualitative composition, but have different
physical and chemical properties.
Isomers are substances that have the same composition (the
number of atoms of each type), but a different mutual
arrangement of atoms - a different structure.
There are two types of isomerism - structural and spatial.
Isomerism
structural
isomerism
spatial
isomerism
Interclass
carbon
skeleton
positions of
multiple
bond
Positions of
substituents
(functional
groups)
geometrical
optical
Structural isomerism
Structural isomers - compounds with the same composition, but a
different order of binding atoms, i.e. with different chemical
structures. The molecular formula of the structural isomers is the
same, but the structural is different.
Structural isomerism
1. Isomerism of the carbon skeleton: substances differ in the
structure of the carbon chain, which can be linear or
branched.
С5Н12
C
H3 CH CH2 CH3
CH3
2-methylbutane (isopenthane)
C
H3 CH2 CH2 CH2 CH3
n-penthane
C
H3 C CH3
CH3
CH3
2,2-dimethylpropane
Structural isomerism
2. Isomerism of the position is due to the different position of the multiple
bond, functional group or substituent with the same carbon skeleton of the
molecules.
2.1. Isomerism of the position of the functional group. For example,
there are two isomeric saturated alcohols with the general formula C3H8O:
propanol-1 (n-propyl alcohol), propanol-2 (isopropyl alcohol):
C
H3 CH CH3
OH
Propanol-2 ( iso-propyl alcohol)
C
H3 CH2 CH2 OH
Propanol-1 ( n-propyl alcohol)
Structural isomerism
2.2. Isomerism of the position of a multiple bond can be
caused by the different position of the multiple (double or triple)
bond in unsaturated compounds. For example, in butene-1 and
butene-2:
C
H2 CH CH2 CH3
Butene-1
C
H3 CH CH CH3
Butene-2
Structural isomerism
2.3. Interclass isomerism is another type of structural
isomerism, when substances from different classes of
substances have the same general formula.
For example, the formula C2H6O corresponds to: alcohol
(ethanol) and simple ether (dimethyl ether):
C
H3 CH2 OH
Alcohol (Ethanol)
C
H3 O CH3
Ether (Diethyl ether)
Spatial isomerism
Spatial isomers are substances with the same composition and
chemical structure, but with a different spatial arrangement of
atoms in a molecule. Types of spatial isomerism - geometric (cis-
trans) and optical isomerism.
Spatial isomerism
1. Geometric isomerism (or cis-trans-isomerism).
Geometric isomerism is characteristic of compounds in which the position of
substituents relative to the plane of the double bond or ring is different. For
example, for alkenes and cycloalkanes.
The double bond does not have free rotation around its axis.
Therefore, substituents at carbon atoms in a double bond can be located
either on one side of the double bond plane (cis isomer), or on opposite
sides of the double bond plane (trans isomer). At the same time, it is
impossible to obtain a trans-isomer from a cis-isomer by any rotation, and
vice versa.
For example, butene-2 exists as both cis and trans isomers.
Geometric isomerism
cis-trans isomerism is characteristic of
compounds in which each carbon atom in the
C=C double bond (or in the cycle) has two
different substituents
for compounds of the form СH2=СHR and СR2=СHR', cis-trans
isomerism is not typical.
Spatial isomerism
2. Optical isomerism
Optical isomers are spatial isomers whose molecules are related to each other
as an object and an incompatible mirror image.
Optical isomerism is characteristic of molecules of substances that have an
asymmetric carbon atom.
An asymmetric (chiral) carbon atom
is a carbon atom bonded to four
different substituents.
Such molecules have optical
activity - the ability to rotate the
plane of polarization of light when a
polarized beam passes through a
solution of a substance.
Optical
isomerism
L-thyroxin
L-carnitine
L-amphetamine
L-chloramphenicol
A racemic mixture is a mixture of
equal amounts of enantiomers of
the same substance. Does not have
optical activity. Almost always,
during reactions involving a chiral
center, just such a mixture is
formed (with the exception of
stereospecific and stereoselective
reactions)
Menthol racemic
Mutual influence of atoms in the molecules of organic compounds and methods of its transmission
Polarizability - the ability of bond electrons to move under the influence of an external electric field or other reacting particle.
The polarity of the bond is due to the uneven distribution of electron density due to different values of electronegativity
(E.N.) of the bonded atoms
E.N. - the ability of an atom in a molecule to hold valence electrons.
Pauling's scale
F O N, Cl Br Csp Csp2
I Csp3
H Li Na
4,0 3,5 3,0; 3,0 2,8 2,75 2,69 2,6 2,5 2,2 1,0 0,9
E.N. depends on:
 nuclear charge
 type of hybridization of atomic orbitals
 influences of substitutes
Inductive effect
Inductive effect - transfer of the electronic influence of substituents along the chain of σ-bonds (Shift of electron density
along the chain of σ-bonds under the influence of substituents)Designation : I (+I, -I )
Substituents, in comparison with the H atom, shifting the electron density of the σ-bond more strongly towards the chain
(away from itself), increase the electron density in the chain, exhibit + I, electron-donor properties (EDp): radicals, anions,
metals.
Substituents that shift the electron density of the σ-bond in their direction more strongly than the H atom, reduce the
electron density in the chain, exhibit –I, electron-withdrawing properties (EWp): -OH, -OR, -NH2, -NO2, -COOH, halogens,
cations.
Inductive effect property
The effect quickly decays after 3-4 bonds due to the low mobility of σ-bond electrons
Pairing systems. Pairing. Pairing types.
Systems by mutual arrangement of double bonds:
 Cumulated CH2=C=CH–CH3 butadiene-1,2
 Conjugated CH2=CH–CH=CH2 butadiene-1,3
 Isolated CH2=CH–CH2–CH=CH2 pentadiene-1,4
Conjugation - redistribution, alignment of electron density in conjugated systems, leading to the formation of a single π-
electron cloud, partial alignment of bond lengths, energy release (E conjugation).
The ↑ chain length, the ↑ E conjugation, the ↑ stability of the connection.
Mesomeric effect
Mesomeric effect - transfer of the electronic influence of a substituent along the conjugated system (shift of the electron
density along the π-bond of the conjugated system under the influence of the substituent)Designation: М ( +М, –М)
Substituents that shift the electron density towards the chain increase the electron density in the system, show +M, E.N.
properties: -NH2, -OH, -OR, - Cl
Substituents, pulling the electron density from the conjugated system, lower the electron density in the system, show -
M, E.N. properties: carboxyl, carbonyl, nitril, sulfonic, nitro groups.
In terms of M > I, halogens are an exception. For them –I > +M. Property of the mesomeric effect: unlike the inductive
effect, the mesomeric effect does not decay along the circuit.

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Organic Isomerism Lecture on Structural and Spatial Isomers

  • 1. Lecture 2 Isomerism. Mutual influence of atoms in the molecules of organic compounds
  • 2. Isomerism is the phenomenon of the existence of chemicals that have the same quantitative and qualitative composition, but have different physical and chemical properties. Isomers are substances that have the same composition (the number of atoms of each type), but a different mutual arrangement of atoms - a different structure.
  • 3. There are two types of isomerism - structural and spatial. Isomerism structural isomerism spatial isomerism Interclass carbon skeleton positions of multiple bond Positions of substituents (functional groups) geometrical optical
  • 4. Structural isomerism Structural isomers - compounds with the same composition, but a different order of binding atoms, i.e. with different chemical structures. The molecular formula of the structural isomers is the same, but the structural is different.
  • 5. Structural isomerism 1. Isomerism of the carbon skeleton: substances differ in the structure of the carbon chain, which can be linear or branched. С5Н12 C H3 CH CH2 CH3 CH3 2-methylbutane (isopenthane) C H3 CH2 CH2 CH2 CH3 n-penthane C H3 C CH3 CH3 CH3 2,2-dimethylpropane
  • 6. Structural isomerism 2. Isomerism of the position is due to the different position of the multiple bond, functional group or substituent with the same carbon skeleton of the molecules. 2.1. Isomerism of the position of the functional group. For example, there are two isomeric saturated alcohols with the general formula C3H8O: propanol-1 (n-propyl alcohol), propanol-2 (isopropyl alcohol): C H3 CH CH3 OH Propanol-2 ( iso-propyl alcohol) C H3 CH2 CH2 OH Propanol-1 ( n-propyl alcohol)
  • 7. Structural isomerism 2.2. Isomerism of the position of a multiple bond can be caused by the different position of the multiple (double or triple) bond in unsaturated compounds. For example, in butene-1 and butene-2: C H2 CH CH2 CH3 Butene-1 C H3 CH CH CH3 Butene-2
  • 8. Structural isomerism 2.3. Interclass isomerism is another type of structural isomerism, when substances from different classes of substances have the same general formula. For example, the formula C2H6O corresponds to: alcohol (ethanol) and simple ether (dimethyl ether): C H3 CH2 OH Alcohol (Ethanol) C H3 O CH3 Ether (Diethyl ether)
  • 9. Spatial isomerism Spatial isomers are substances with the same composition and chemical structure, but with a different spatial arrangement of atoms in a molecule. Types of spatial isomerism - geometric (cis- trans) and optical isomerism.
  • 10. Spatial isomerism 1. Geometric isomerism (or cis-trans-isomerism). Geometric isomerism is characteristic of compounds in which the position of substituents relative to the plane of the double bond or ring is different. For example, for alkenes and cycloalkanes. The double bond does not have free rotation around its axis. Therefore, substituents at carbon atoms in a double bond can be located either on one side of the double bond plane (cis isomer), or on opposite sides of the double bond plane (trans isomer). At the same time, it is impossible to obtain a trans-isomer from a cis-isomer by any rotation, and vice versa. For example, butene-2 exists as both cis and trans isomers.
  • 11. Geometric isomerism cis-trans isomerism is characteristic of compounds in which each carbon atom in the C=C double bond (or in the cycle) has two different substituents for compounds of the form СH2=СHR and СR2=СHR', cis-trans isomerism is not typical.
  • 12. Spatial isomerism 2. Optical isomerism Optical isomers are spatial isomers whose molecules are related to each other as an object and an incompatible mirror image. Optical isomerism is characteristic of molecules of substances that have an asymmetric carbon atom. An asymmetric (chiral) carbon atom is a carbon atom bonded to four different substituents. Such molecules have optical activity - the ability to rotate the plane of polarization of light when a polarized beam passes through a solution of a substance.
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  • 15. Optical isomerism L-thyroxin L-carnitine L-amphetamine L-chloramphenicol A racemic mixture is a mixture of equal amounts of enantiomers of the same substance. Does not have optical activity. Almost always, during reactions involving a chiral center, just such a mixture is formed (with the exception of stereospecific and stereoselective reactions) Menthol racemic
  • 16. Mutual influence of atoms in the molecules of organic compounds and methods of its transmission Polarizability - the ability of bond electrons to move under the influence of an external electric field or other reacting particle. The polarity of the bond is due to the uneven distribution of electron density due to different values of electronegativity (E.N.) of the bonded atoms E.N. - the ability of an atom in a molecule to hold valence electrons. Pauling's scale F O N, Cl Br Csp Csp2 I Csp3 H Li Na 4,0 3,5 3,0; 3,0 2,8 2,75 2,69 2,6 2,5 2,2 1,0 0,9 E.N. depends on:  nuclear charge  type of hybridization of atomic orbitals  influences of substitutes
  • 17. Inductive effect Inductive effect - transfer of the electronic influence of substituents along the chain of σ-bonds (Shift of electron density along the chain of σ-bonds under the influence of substituents)Designation : I (+I, -I ) Substituents, in comparison with the H atom, shifting the electron density of the σ-bond more strongly towards the chain (away from itself), increase the electron density in the chain, exhibit + I, electron-donor properties (EDp): radicals, anions, metals. Substituents that shift the electron density of the σ-bond in their direction more strongly than the H atom, reduce the electron density in the chain, exhibit –I, electron-withdrawing properties (EWp): -OH, -OR, -NH2, -NO2, -COOH, halogens, cations. Inductive effect property The effect quickly decays after 3-4 bonds due to the low mobility of σ-bond electrons
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  • 19. Pairing systems. Pairing. Pairing types. Systems by mutual arrangement of double bonds:  Cumulated CH2=C=CH–CH3 butadiene-1,2  Conjugated CH2=CH–CH=CH2 butadiene-1,3  Isolated CH2=CH–CH2–CH=CH2 pentadiene-1,4 Conjugation - redistribution, alignment of electron density in conjugated systems, leading to the formation of a single π- electron cloud, partial alignment of bond lengths, energy release (E conjugation). The ↑ chain length, the ↑ E conjugation, the ↑ stability of the connection. Mesomeric effect Mesomeric effect - transfer of the electronic influence of a substituent along the conjugated system (shift of the electron density along the π-bond of the conjugated system under the influence of the substituent)Designation: М ( +М, –М) Substituents that shift the electron density towards the chain increase the electron density in the system, show +M, E.N. properties: -NH2, -OH, -OR, - Cl Substituents, pulling the electron density from the conjugated system, lower the electron density in the system, show - M, E.N. properties: carboxyl, carbonyl, nitril, sulfonic, nitro groups. In terms of M > I, halogens are an exception. For them –I > +M. Property of the mesomeric effect: unlike the inductive effect, the mesomeric effect does not decay along the circuit.