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The Panda’s Roots




Dr Karobi Moitra
Clare Boothe Luce Professor of Molecular Biology
Assistant Professor (Tenure-Track)
Trinity Washington University        http://cache.io9.com/assets/images/8/2010/12/090116_panda.jpg
Washington DC
The story begins here in Washington DC in 1972…..


The People’s Republic of China made a gift to the people
of the USA- 2 giant Panda’s: Ling Ling and Hsing Hsing

Over a million visitors came to see the pair in 1972




  http://newshour.s3.amazonaws.com/photos/2012/09/27/Hsing_Hsing_l_and_Ling_Ling_r_-_Jessie_Cohen_Smithsonians_Nat_Zoo_slideshow.JPG
Throughout the 70’s every American hoped for a baby
panda, however, sadly that was not to be……




             http://images.china.cn/attachement/jpg/site1007/20090105/000cf1bdd03f0acbbdac1c.jpg
Until July 21st 1983…………

On this historic day Ling Ling gave birth to the first baby
giant panda born in the USA

It was a tiny, hairless mouse-like infant, weighing ????

Can you guess how much the baby panda weighed?
(Adult panda’s weigh 220-250lbs/100-113 kg)




                   http://www.bluechannel24.com/?p=14428
Ling Ling’s infant weighed a minute 0.2lbs (134g)……


    Sadly the cub only lived for 3 hours, it died of a
Pseudomonas bacterial infection acquired in the mothers
                      birth canal




                   http://www.bluechannel24.com/?p=14428
The case for paternity……….

     Hsing Hsing was Ling Lings mate but Chia Chia
      another male panda could also be the father


       Who was the father of Ling Ling’s cub?
Can you figure out how the paternity of Ling Lings
              cub was determined?

                       Hint: it involves proteins




         http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
Snippets of skin were taken from the dead cub and it’s
                 prospective parents


300 proteins were tested by O’Brien’s group from the
 panda’s skin cells using protein gel electrophoresis
SDS-PAGE
                         (not actual Panda protein)




http://www.personal.psu.edu/jms5704/blogs/simmons/1476-7961-4-12-1.jpg
So who was the cub’s father?

         Chia Chia or Hsing Hsing?


We will find out when we run a gel simulation
Solving a 150 year old Evolutionary Puzzle…..

This involvement with the Panda paternity testing
lead Steve O’Brien and his group to ponder upon
             this age-old question




         http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
Is the Giant Panda a bear or a Racoon?



• Ursidae or Procyonidae?

• Pere Armand David, 1869- bear

• Alphonse Milne-Edwards (Paris Museum of Natural
History) examined pelts, skeleton and teeth- giant
raccoon

• Middle of the road group placed the giant panda and
the red panda together in Ailuridae
And the controversy continued for 150 years or so
……until 1985




            http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
How was the ancestry of the giant panda solved?
The Molecular Biology Toolkit:

1.   Protein analysis: Were allozymes (proteins) in Panda similar to
     bears or racoon?

2.   Mitochondrial DNA sequence analysis
     Were mitDNA sequences in Panda similar to bears or racoons?




3.   Organization of chromosomes
     Were chromosomes in the panda derived from bears or racoons?
Construction of a Phylogenetic Tree




http://bioweb.uwlax.edu/bio203/s2007/barger_rach/
Conclusion:

            Giant Panda’s are closer relatives of the
            bear family (Ursidae)than of the racoon
                     family (Procyonidae)!




http://newshour.s3.amazonaws.com/photos/2012/09/27/Hsing_Hsing_l_and_Li
ng_Ling_r_-_Jessie_Cohen_Smithsonians_Nat_Zoo_slideshow.JPG
Reference:

Tears of the Cheetah by Stephen J O’Brien

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The panda's roots

  • 1. The Panda’s Roots Dr Karobi Moitra Clare Boothe Luce Professor of Molecular Biology Assistant Professor (Tenure-Track) Trinity Washington University http://cache.io9.com/assets/images/8/2010/12/090116_panda.jpg Washington DC
  • 2. The story begins here in Washington DC in 1972….. The People’s Republic of China made a gift to the people of the USA- 2 giant Panda’s: Ling Ling and Hsing Hsing Over a million visitors came to see the pair in 1972 http://newshour.s3.amazonaws.com/photos/2012/09/27/Hsing_Hsing_l_and_Ling_Ling_r_-_Jessie_Cohen_Smithsonians_Nat_Zoo_slideshow.JPG
  • 3. Throughout the 70’s every American hoped for a baby panda, however, sadly that was not to be…… http://images.china.cn/attachement/jpg/site1007/20090105/000cf1bdd03f0acbbdac1c.jpg
  • 4. Until July 21st 1983………… On this historic day Ling Ling gave birth to the first baby giant panda born in the USA It was a tiny, hairless mouse-like infant, weighing ???? Can you guess how much the baby panda weighed? (Adult panda’s weigh 220-250lbs/100-113 kg) http://www.bluechannel24.com/?p=14428
  • 5. Ling Ling’s infant weighed a minute 0.2lbs (134g)…… Sadly the cub only lived for 3 hours, it died of a Pseudomonas bacterial infection acquired in the mothers birth canal http://www.bluechannel24.com/?p=14428
  • 6. The case for paternity………. Hsing Hsing was Ling Lings mate but Chia Chia another male panda could also be the father Who was the father of Ling Ling’s cub?
  • 7. Can you figure out how the paternity of Ling Lings cub was determined? Hint: it involves proteins http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
  • 8. Snippets of skin were taken from the dead cub and it’s prospective parents 300 proteins were tested by O’Brien’s group from the panda’s skin cells using protein gel electrophoresis
  • 9.
  • 10. SDS-PAGE (not actual Panda protein) http://www.personal.psu.edu/jms5704/blogs/simmons/1476-7961-4-12-1.jpg
  • 11. So who was the cub’s father? Chia Chia or Hsing Hsing? We will find out when we run a gel simulation
  • 12. Solving a 150 year old Evolutionary Puzzle….. This involvement with the Panda paternity testing lead Steve O’Brien and his group to ponder upon this age-old question http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
  • 13. Is the Giant Panda a bear or a Racoon? • Ursidae or Procyonidae? • Pere Armand David, 1869- bear • Alphonse Milne-Edwards (Paris Museum of Natural History) examined pelts, skeleton and teeth- giant raccoon • Middle of the road group placed the giant panda and the red panda together in Ailuridae
  • 14. And the controversy continued for 150 years or so ……until 1985 http://www.globalsherpa.org/wp-content/uploads/2012/07/cute-giant-panda-eating-bamboo-leaves1.jpg
  • 15. How was the ancestry of the giant panda solved?
  • 16. The Molecular Biology Toolkit: 1. Protein analysis: Were allozymes (proteins) in Panda similar to bears or racoon? 2. Mitochondrial DNA sequence analysis Were mitDNA sequences in Panda similar to bears or racoons? 3. Organization of chromosomes Were chromosomes in the panda derived from bears or racoons?
  • 17. Construction of a Phylogenetic Tree http://bioweb.uwlax.edu/bio203/s2007/barger_rach/
  • 18. Conclusion: Giant Panda’s are closer relatives of the bear family (Ursidae)than of the racoon family (Procyonidae)! http://newshour.s3.amazonaws.com/photos/2012/09/27/Hsing_Hsing_l_and_Li ng_Ling_r_-_Jessie_Cohen_Smithsonians_Nat_Zoo_slideshow.JPG
  • 19. Reference: Tears of the Cheetah by Stephen J O’Brien