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Surveillance of AMR, AMC and HAI
in Sweden
-National perspective
Dr. Johan Struwe
Public Health Agency of Sweden
Hospitals level/ health care workers
The Swedish Association of Local
Authorities and Regions;
An employer organization,
representing the regional
governments
Integrated annual surveillance report since 2000
https://www.folkhalsomyndigheten.se/publicerat-material/publikationsarkiv/s/swedres-svarm-2018/
I Surveillance of AMR
5
0
2000
4000
6000
8000
10000
12000
ESBL MRSA VRE ESBL-CARBA PNSP
2010 2011 2012 2013 2014 2015 2016 2017 2018
Source: Public Health Agency of Sweden
Number of cases
49/100 000
107/100 000
16/100 000
44/100 000
4/100 000
0,2/100 000 5/100 000 0,5/100 000 0,9/100 000
Surveillance systems for AMR I
Mandatory: Communicable diseases act
1/100 000
Surveillance systems for AMR II
Svebar
• A national automatized system for
– surveillance of resistance in bacteria and fungi
– automated early warning signals can be defined at laboratory and/ or national levels
• Development commissioned by the government.
A collaboration between diagnostic laboratories and PHAS
• Open since 2012, volontary.
21/ 26 laboratories participating, covering > 80 % population.
• Includes ”no growth” and ”mixed flora” results for
calculating denominators
• First reports (E. coli, K. pneumoniae and S. aureus in blood 2017)
– Published on PHAS website. Approved by laboratories before publication.
– https://www.folkhalsomyndigheten.se/smittskydd-beredskap/antibiotika-och-
antibiotikaresistens/resistensovervakning/svebar/rapporter-fran-svebar/rapporter-2017/
6
EW-filter
• National
• Lab-level
Terms
synonymized if
needed
Early database-(2 weeks w lab-id)
Daily AST-re-
sults
automatically
from all labs
Incoming files validated
New daily file
Reports
Long-term
Data-base
Day 14 are data anonymized
National operatorsLocal users
Early warnings sent by e-
mail and if extraordinary
telephone
.Sid
EARS-Net and CAESAR
-International AMR surveillance of invasive isolates
Source: WHO EURO CAESAR annual report 2019:
http://www.euro.who.int/__data/assets/pdf_file/0003/418863/53373-WHO-CAESAR-annual-report-2019.pdf?ua=1
GLASS
Global antimicrobial resistance
surveillance system
www.who.int/glass
.Sid
Laboratory AMR
surveillance
ESBLcarba (enterobacteriaceae)
All confirmed isolates are collected and subject to WGS.
Resistance genes are identified. Cluster analysis of relatedness.
ESBLcarba (acinetobacter)
All isolates resistant to meropenem are collected and subject o WGS.
Resistance genes are identified. Cluster analysis of relatedness.
Colistin resistant enterobacteriales verified by microdilution at reference lab
WGS for detection of mcr och and its´ variants. Cluster analysis of relatedness.
H. influenzae (cephalosporin-resistant)
Betalactam resistant isolates verified by microdilution at reference laboratory are
collected and analyzed by WGS for detection of mutations in the ftsI-gene and for
transmissible betalactamasegenes (blaTEM och blaROB) and other relevant genes.
Cluster analysis (SNPs) of relatedness.
MRSA
All isolates from clinical cases are collected, spa-typing and PVL-status (by PCR)
N. gonorrhoeae (ceftriaxome/cefixime MIC>0,125 and/or azitromycine MIC>256)
All isolates with MIC>0,125 mg/L for ceftriaxon or cefixim and/ or MIC>256
mg/mL for azitromycin are sent no national Neisseria reference and subject to
WGS, and MLST and NG-STAR including penA and 23S rRNA genes.
S. pneumonie (PcG MIC >=0,5)
Allisolates and their corresponding AST results are collected and are serotyped by
gel-diffusion and capsule swelling.
Vancomycin-resistant enterococci (VRE)
All confirmed isolates are collected and subject o WGS for van-type and plasmid
and/ or ribosomal resresistance to leinezolid Cluster analysis of relatedness.
II Surveillance of AMC
Surveillance of antibiotic consumption in hospitals
- National level
Data from e-health agency
Source: SWEDRES 2018
0
1 000
2 000
3 000
4 000
5 000
6 000
7 000
Antalrecept
Recipes collected at a secondary hospital pharmacy
Source: SLL-data
2014
2015
2016
2017
Courtesy Annika Hahlin, Strama Stockholm
Surveillance of antibiotic consumption in hospitals
- Regional level
0%
5%
10%
15%
20%
25%
30%
35%
40%
45%
50%
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
Danderyd Norrtälje S:t Göran Södersjukhuet Södertälje Ersta Karolinska
Penicillin V + G
PcG PcV
0%
5%
10%
15%
20%
25%
30%
35%
40%
45%
50%
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
2014
2015
2016
2017
Karolinska Södertälje S:t Göran Norrtälje Södersjukhuet Danderyd Ersta
Quinolones + cephalosporins
Kinoloner
Cefalosporiner
10%
8% 7% 6% 6% 5% 5%
0%
5%
10%
15%
20%
25%
30%
35%
40%
45%
50%
Piperacillin-tazobactam
2014
2015
2016
2017
Proportion out of total antibiotics, delivered DDD:s per
hospitals in Stockholm region 2014-2017
Source: SLL-data
8%
6%
4%
2% 2% 2% 2%
0%
5%
10%
15%
20%
25%
30%
35%
40%
45%
50%
Carbapenems
2014
2015
2016
2017
Courtesy Annika Hahlin, Strama Stockholm
.Sid
Surveillance of antibiotic prescriptions
Data from e-health agency
Open benchmarking at all levels (regions, municipalities, GP-practices, hospitals…)
III Surveillance of HAI
1/ Infection tool
-surveillance of antibiotic prescriptions and treatment
of HAI at national level
Prescribers (so far
mainly hospitals
Monitoring, feedback
-rational ab use
-patient safety
.Sid
2/ Manual review by GTT of 88 638
randomly selected admissions 2013-2017
0%
5%
10%
15%
20%
25%
30%
2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018
Andel med VRI Andel med VRI av dem med multipla riskfaktorerProportion with HAI
3/ PPM; Prevalence of HAI 2008-2018
1-2 measures/ year, approx 75 hospitals, 20 000 beds
Over all proportion
with HAI
Proportion with HAI,
Multiple risk factors
0,0 %
5,0 %
10,0 %
15,0 %
20,0 %
25,0 %
30,0 %
35,0 %
40,0 %
2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018
Andel med CVK Andel med immunsuppression
Andel med KAD Andel med kirurgiskt ingrepp
Andel med mekanisk ventilation Andel med antibiotikabehandling
Proportion of patients with risk factors
for HAI during PPM
Central line
Urinary catheter
Mechanical ventilation
Immunosuppression
Surgical procedure
Antibiotic treatment
0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
Östergötland* (2419)
Stockholm (4010)
Halland (1054)
Norrbotten (675)
Dalarna (821)
Västmanland (831)
Gotland (258)
Jämtland Härjedalen (97)
Kalmar (531)
Västra Götaland (1009)
Kronoberg (596)
Blekinge (918)
Örebro (1625)
Västernorrland (845)
Värmland (1240)
Gävleborg (1262)
Skåne (4748)
Uppsala (1092)
Jönköping (1226)
Sörmland
Riket (22838)
2018 2017
Observational studies on compliance to basal
hygiene and dresscode
Percent correct in all 7 steps per region/ county
https://webbutik.skl.se/bilder/artiklar/pdf/5420.pdf?issuusl=ignore
4/ HALT-
Health-caare
Associated
infections in Long-
Term care facilities
Reduced
need for
antibiotics
Prevention of
infections
Prevention of
bacterial spread
Data for action!
Raise awareness and commitment!
Rational use
of antibiotics
Evidence-based/
consensus
guidelines for
-treatment
-diagnosis
based on
prevailing AMR
situation
Situation
analyses;
national and
regional/local
surveillance
Resistance in
relevant pathogens
in relevant samples
Antibiotic use
Health-care
associated infections
Data for
action
Compliance to
guidelines
Open
benchmarking
Some recommended internationally available
protocols for surveillance
Antimicrobial resistance
• CAESAR
• http://www.euro.who.int/__data/assets/pdf_file/0005/293369/CAESAR-V2-Surveillance-Antimicrobial-
Resistance-2015-en.pdf
• GLASS
• www.who.int/glass
Antimicrobial use and/ or consumption
• ESAC-Net
• https://www.ecdc.europa.eu/en/about-us/partnerships-and-networks/disease-and-laboratory-networks/esac-
net
• WHO
• https://www.who.int/medicines/areas/rational_use/AMU_Surveillance/en/
Health-care associated infections
• Point prevalence surveys (PPS)
• ECDC
• https://www.ecdc.europa.eu/en/healthcare-associated-infections-acute-care-hospitals/surveillance-disease-
data/database
https://www.ecdc.europa.eu/sites/default/files/documents/AMR-indicators-joint-report-Oct-2017.pdf
Outcome indicators as regards surveillance
of antimicrobial resistance and
antimicrobial consumption
.Sid
Thank you!

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Surveillance of AMR, AMC and HAI at the national level in Sweden

  • 1. Surveillance of AMR, AMC and HAI in Sweden -National perspective Dr. Johan Struwe Public Health Agency of Sweden
  • 2. Hospitals level/ health care workers The Swedish Association of Local Authorities and Regions; An employer organization, representing the regional governments
  • 3. Integrated annual surveillance report since 2000 https://www.folkhalsomyndigheten.se/publicerat-material/publikationsarkiv/s/swedres-svarm-2018/
  • 5. 5 0 2000 4000 6000 8000 10000 12000 ESBL MRSA VRE ESBL-CARBA PNSP 2010 2011 2012 2013 2014 2015 2016 2017 2018 Source: Public Health Agency of Sweden Number of cases 49/100 000 107/100 000 16/100 000 44/100 000 4/100 000 0,2/100 000 5/100 000 0,5/100 000 0,9/100 000 Surveillance systems for AMR I Mandatory: Communicable diseases act 1/100 000
  • 6. Surveillance systems for AMR II Svebar • A national automatized system for – surveillance of resistance in bacteria and fungi – automated early warning signals can be defined at laboratory and/ or national levels • Development commissioned by the government. A collaboration between diagnostic laboratories and PHAS • Open since 2012, volontary. 21/ 26 laboratories participating, covering > 80 % population. • Includes ”no growth” and ”mixed flora” results for calculating denominators • First reports (E. coli, K. pneumoniae and S. aureus in blood 2017) – Published on PHAS website. Approved by laboratories before publication. – https://www.folkhalsomyndigheten.se/smittskydd-beredskap/antibiotika-och- antibiotikaresistens/resistensovervakning/svebar/rapporter-fran-svebar/rapporter-2017/ 6
  • 7. EW-filter • National • Lab-level Terms synonymized if needed Early database-(2 weeks w lab-id) Daily AST-re- sults automatically from all labs Incoming files validated New daily file Reports Long-term Data-base Day 14 are data anonymized National operatorsLocal users Early warnings sent by e- mail and if extraordinary telephone
  • 8. .Sid EARS-Net and CAESAR -International AMR surveillance of invasive isolates Source: WHO EURO CAESAR annual report 2019: http://www.euro.who.int/__data/assets/pdf_file/0003/418863/53373-WHO-CAESAR-annual-report-2019.pdf?ua=1
  • 10. .Sid Laboratory AMR surveillance ESBLcarba (enterobacteriaceae) All confirmed isolates are collected and subject to WGS. Resistance genes are identified. Cluster analysis of relatedness. ESBLcarba (acinetobacter) All isolates resistant to meropenem are collected and subject o WGS. Resistance genes are identified. Cluster analysis of relatedness. Colistin resistant enterobacteriales verified by microdilution at reference lab WGS for detection of mcr och and its´ variants. Cluster analysis of relatedness. H. influenzae (cephalosporin-resistant) Betalactam resistant isolates verified by microdilution at reference laboratory are collected and analyzed by WGS for detection of mutations in the ftsI-gene and for transmissible betalactamasegenes (blaTEM och blaROB) and other relevant genes. Cluster analysis (SNPs) of relatedness. MRSA All isolates from clinical cases are collected, spa-typing and PVL-status (by PCR) N. gonorrhoeae (ceftriaxome/cefixime MIC>0,125 and/or azitromycine MIC>256) All isolates with MIC>0,125 mg/L for ceftriaxon or cefixim and/ or MIC>256 mg/mL for azitromycin are sent no national Neisseria reference and subject to WGS, and MLST and NG-STAR including penA and 23S rRNA genes. S. pneumonie (PcG MIC >=0,5) Allisolates and their corresponding AST results are collected and are serotyped by gel-diffusion and capsule swelling. Vancomycin-resistant enterococci (VRE) All confirmed isolates are collected and subject o WGS for van-type and plasmid and/ or ribosomal resresistance to leinezolid Cluster analysis of relatedness.
  • 12. Surveillance of antibiotic consumption in hospitals - National level Data from e-health agency Source: SWEDRES 2018
  • 13. 0 1 000 2 000 3 000 4 000 5 000 6 000 7 000 Antalrecept Recipes collected at a secondary hospital pharmacy Source: SLL-data 2014 2015 2016 2017 Courtesy Annika Hahlin, Strama Stockholm Surveillance of antibiotic consumption in hospitals - Regional level
  • 14. 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 Danderyd Norrtälje S:t Göran Södersjukhuet Södertälje Ersta Karolinska Penicillin V + G PcG PcV 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 2014 2015 2016 2017 Karolinska Södertälje S:t Göran Norrtälje Södersjukhuet Danderyd Ersta Quinolones + cephalosporins Kinoloner Cefalosporiner 10% 8% 7% 6% 6% 5% 5% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% Piperacillin-tazobactam 2014 2015 2016 2017 Proportion out of total antibiotics, delivered DDD:s per hospitals in Stockholm region 2014-2017 Source: SLL-data 8% 6% 4% 2% 2% 2% 2% 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% 50% Carbapenems 2014 2015 2016 2017 Courtesy Annika Hahlin, Strama Stockholm
  • 15. .Sid Surveillance of antibiotic prescriptions Data from e-health agency Open benchmarking at all levels (regions, municipalities, GP-practices, hospitals…)
  • 17. 1/ Infection tool -surveillance of antibiotic prescriptions and treatment of HAI at national level Prescribers (so far mainly hospitals Monitoring, feedback -rational ab use -patient safety
  • 18. .Sid 2/ Manual review by GTT of 88 638 randomly selected admissions 2013-2017
  • 19. 0% 5% 10% 15% 20% 25% 30% 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018 Andel med VRI Andel med VRI av dem med multipla riskfaktorerProportion with HAI 3/ PPM; Prevalence of HAI 2008-2018 1-2 measures/ year, approx 75 hospitals, 20 000 beds Over all proportion with HAI Proportion with HAI, Multiple risk factors
  • 20. 0,0 % 5,0 % 10,0 % 15,0 % 20,0 % 25,0 % 30,0 % 35,0 % 40,0 % 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018 Andel med CVK Andel med immunsuppression Andel med KAD Andel med kirurgiskt ingrepp Andel med mekanisk ventilation Andel med antibiotikabehandling Proportion of patients with risk factors for HAI during PPM Central line Urinary catheter Mechanical ventilation Immunosuppression Surgical procedure Antibiotic treatment
  • 21. 0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100% Östergötland* (2419) Stockholm (4010) Halland (1054) Norrbotten (675) Dalarna (821) Västmanland (831) Gotland (258) Jämtland Härjedalen (97) Kalmar (531) Västra Götaland (1009) Kronoberg (596) Blekinge (918) Örebro (1625) Västernorrland (845) Värmland (1240) Gävleborg (1262) Skåne (4748) Uppsala (1092) Jönköping (1226) Sörmland Riket (22838) 2018 2017 Observational studies on compliance to basal hygiene and dresscode Percent correct in all 7 steps per region/ county
  • 24. Reduced need for antibiotics Prevention of infections Prevention of bacterial spread Data for action! Raise awareness and commitment! Rational use of antibiotics Evidence-based/ consensus guidelines for -treatment -diagnosis based on prevailing AMR situation Situation analyses; national and regional/local surveillance Resistance in relevant pathogens in relevant samples Antibiotic use Health-care associated infections Data for action Compliance to guidelines Open benchmarking
  • 25. Some recommended internationally available protocols for surveillance Antimicrobial resistance • CAESAR • http://www.euro.who.int/__data/assets/pdf_file/0005/293369/CAESAR-V2-Surveillance-Antimicrobial- Resistance-2015-en.pdf • GLASS • www.who.int/glass Antimicrobial use and/ or consumption • ESAC-Net • https://www.ecdc.europa.eu/en/about-us/partnerships-and-networks/disease-and-laboratory-networks/esac- net • WHO • https://www.who.int/medicines/areas/rational_use/AMU_Surveillance/en/ Health-care associated infections • Point prevalence surveys (PPS) • ECDC • https://www.ecdc.europa.eu/en/healthcare-associated-infections-acute-care-hospitals/surveillance-disease- data/database
  • 26. https://www.ecdc.europa.eu/sites/default/files/documents/AMR-indicators-joint-report-Oct-2017.pdf Outcome indicators as regards surveillance of antimicrobial resistance and antimicrobial consumption