Pubmed Basics9 08revised

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This document provides an overview of a PubMed basics class that teaches how to use the PubMed database. The class covers how to find PubMed, perform searches, print/email/save results, and get full text articles. It discusses using Boolean operators and describes two methods for obtaining full text - checking for open access articles or requesting articles through the library. Contact information and additional resources are also provided.

Technology Health & Medicine

Joy Graham, 415-206-6639 [email_address] Terri Mason, 415-206-6638 [email_address] SFGH’s Barnett-Briggs Medical Library September 16, 2008 PubMed Basics

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This document provides an overview of open access publishing from an author's perspective. It defines open access as permitting users to access, use, and distribute scholarly articles without financial, legal, or technical barriers. The document discusses various open access models used by publishers, the gold and green routes for authors to pursue open access, trends in open access publishing numbers and disciplines, article processing charges, and resources for authors to consider open access options and evaluate journals.

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How to Find Articles Finding research articles 1 Why find research articles? 2 What is a research article? 3 Strategies to find research articles 4 Advanced search interface 5 Logistics of how to find full-text articles 6 How to read research articles What is a research article? Before we talk about how to find research articles, we have to agree on what we're looking for. We're looking for scientific truth. Where do you get it? From a Trustworthy Authority? Give me a break! (see rant). Scientific truth resides in research articles. A research article is one that provides observations or the observed results of experiments (not merely conclusions) and a description of how the experiments were performed, in sufficient detail that someone else might replicate them. You will recognize them by the detail paid to the methods on which the results were based. A news report of a scientific finding is not a research article. It doesn't describe how to do the experiment. A review article is not a research article. It combines lessons learned from multiple research articles but, again, does not describe how to do the experiments it covers. Strategies to find research articles If you know the exact title of the article you're looking for, then: http://www.people.vcu.edu/~elhaij/bnfo300/17/Units/Intro-course/why-find-research-articles.html http://www.people.vcu.edu/~elhaij/bnfo300/17/Units/Intro-course/how-to-read-articles.html http://www.people.vcu.edu/~elhaij/bnfo300/17/Units/Intro-course/trustworthy-authority.html http://www.lib.utexas.edu/lsl/help/modules/review.html • Your favorite search engine may be the fastest way to reach the article (if you have its exact title). However, if you're doing this from off-campus, the site you reach will not recognize your IP address and not realize that you are a member of the VCU community and thus deserving of the full text of articles in journals to which VCU subscribes. • • VCU library general search facility is an excellent way of getting most articles. If you are accessing it from off campus, you'll be prompted for your eID and password if needed. But no database is perfect, and you may sometimes need to look elsewhere. If you don't know the exact title, then: • Using a search engines is generally a poor strategy -- too low of a signal-to-noise ratio • • Google Scholar is much better but I haven't used it enough to know how its database compares to others. Note that Google Scholar allows advanced searches by clicking the down arrow in the search box. • • For greater flexibility, try dedicated services, such as PubMed and Web of Sciences. There are two major strategies to use these indexes to find research articles (plus one general fallback strategy): • Keyword search: Looks for articles whose titles, abstracts, or author lists contain a set of words that you supply. Used by all the sites. This is what you're already used to. http://scholar.google.com/schhp? ...

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Pubmed Basics9 08revised

1. Joy Graham, 415-206-6639 [email_address] Terri Mason, 415-206-6638 [email_address] SFGH’s Barnett-Briggs Medical Library September 16, 2008 PubMed Basics

4. What is PubMed and where can you find it?

5. Library Website from CHN Home Page

6. PubMed on Library Web Site

7. Open Web: www.pubmed.gov

8. BOOLEAN OPERATORS: OR AND NOT

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