OSFair2017 Workshop | Open data and infrastructures to support sustainable agri-food systems
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Thomas Bartzanas talks about open reserch publishing platforms | OSFair2017 Workshop Workshop title: The roadmap to better food: using ICT an open data to overcome barriers in the agriculture value chain Workshop overview: The session will discuss infrastructures for open science in the agri-food domain. It will also discuss the issue and the importance of open data for agricultural and agri-food communities and science. Presentation abstract: Exploiting open data in combination with farmers’ local knowledge, and the parallel processing of them by targeted Information and Communication Technology (ICT) tools, support farmers in the application of ecological principles in food production. A broader access to open data and data analytic tools for agriculture mediated by public open access initiatives can help to provide farmers more power in the information management sector and to implement tools supporting the transition towards sustainable agri-food systems. Here we present the experience of H2020 CAPSELLA project (www.capsella.eu) in developing new models of participatory innovation in biodiversity-based agriculture working with open software, open data and open hardware. Currently there are a lot of stakeholders involved in the data collection and management in agriculture (companies, organizations, public authorities, farmers). However the accessible on all these data is still questionable. In this context open data has become and should more widely used within the agricultural data environment. The context under which open data should be used and analyzed in agro-food sector is presented together with some so far success stories. When: DAY 1 - PARALLEL SESSION 1
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Text and Data Mining (TDM) is a natural ‘next step’ in open science. It can lead to new and unexpected discoveries and increase the impact of publications and repositories. This workshop showcases examples of successful TDM and infrastructural solutions for researchers. We will also discuss what is needed to make most of infrastructures and how publishers and repositories can open up their content.
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OSFair2017 training | Machine accessibility of Open Access scientific publica...
Petr Knoth talks about machine accessibility of Open Access scientific publications from publisher systems via ResourceSync
Training title:TDM unlocking a goldmine of information
Training overview:
Text and Data Mining (TDM) is a natural ‘next step’ in open science. It can lead to new and unexpected discoveries and increase the impact of publications and repositories. This workshop showcases examples of successful TDM and infrastructural solutions for researchers. We will also discuss what is needed to make most of infrastructures and how publishers and repositories can open up their content.
DAY 2 - PARALLEL SESSION 4 & 5
OSFair2017 training | Explore, model, analyze and visualize systematic resear...
Natalia manola presents OpenAIRE analytics (using text & data mining)
Training title:TDM unlocking a goldmine of information
Training overview:
Text and Data Mining (TDM) is a natural ‘next step’ in open science. It can lead to new and unexpected discoveries and increase the impact of publications and repositories. This workshop showcases examples of successful TDM and infrastructural solutions for researchers. We will also discuss what is needed to make most of infrastructures and how publishers and repositories can open up their content.
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Deep Software Variability and Frictionless Reproducibility
Deep Software Variability and Frictionless ReproducibilityUniversity of Rennes, INSA Rennes, Inria/IRISA, CNRS
The ability to recreate computational results with minimal effort and actionable metrics provides a solid foundation for scientific research and software development. When people can replicate an analysis at the touch of a button using open-source software, open data, and methods to assess and compare proposals, it significantly eases verification of results, engagement with a diverse range of contributors, and progress. However, we have yet to fully achieve this; there are still many sociotechnical frictions.
Inspired by David Donoho's vision, this talk aims to revisit the three crucial pillars of frictionless reproducibility (data sharing, code sharing, and competitive challenges) with the perspective of deep software variability.
Our observation is that multiple layers — hardware, operating systems, third-party libraries, software versions, input data, compile-time options, and parameters — are subject to variability that exacerbates frictions but is also essential for achieving robust, generalizable results and fostering innovation. I will first review the literature, providing evidence of how the complex variability interactions across these layers affect qualitative and quantitative software properties, thereby complicating the reproduction and replication of scientific studies in various fields.
I will then present some software engineering and AI techniques that can support the strategic exploration of variability spaces. These include the use of abstractions and models (e.g., feature models), sampling strategies (e.g., uniform, random), cost-effective measurements (e.g., incremental build of software configurations), and dimensionality reduction methods (e.g., transfer learning, feature selection, software debloating).
I will finally argue that deep variability is both the problem and solution of frictionless reproducibility, calling the software science community to develop new methods and tools to manage variability and foster reproducibility in software systems.
Exposé invité Journées Nationales du GDR GPL 2024
Nucleophilic Addition of carbonyl compounds.pptx
Nucleophilic addition is the most important reaction of carbonyls. Not just aldehydes and ketones, but also carboxylic acid derivatives in general.
Carbonyls undergo addition reactions with a large range of nucleophiles.
Comparing the relative basicity of the nucleophile and the product is extremely helpful in determining how reversible the addition reaction is. Reactions with Grignards and hydrides are irreversible. Reactions with weak bases like halides and carboxylates generally don’t happen.
Electronic effects (inductive effects, electron donation) have a large impact on reactivity.
Large groups adjacent to the carbonyl will slow the rate of reaction.
Neutral nucleophiles can also add to carbonyls, although their additions are generally slower and more reversible. Acid catalysis is sometimes employed to increase the rate of addition.
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Workshop abstract:
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License: CC-BY, unless otherwise noted
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Presentation Abstract:
What are the barriers to Open Science, and how do they impact upon different demographics? Open Science is supposed to be about inclusivity, equality, and rigour. But is the way it is implemented meeting these ideals, or simply creating a new set of barriers to scholarship? Younger researchers are basically trying to survive within a hyper-competitive academic system. They are beset on all sides by systemic control and inertia, power dynamics, and fear. What they want to do for science is not always what is best for their career. This creates a system of social barriers that cannot be overcome by mandates and policies that do little to address these structural biases.
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Often obscured in the shadow of their husbands, educated American women in the beginning of the 20th century had to reinvent themselves in order to find a worthy occupation that would befit their skills and aspirations. The first women archaeologists at the American School strove to gain a position worthy of the excellent training they had received in the American Women’s colleges. Stereotypes pushed them to the exploration of more “domestic” topics, minor objects like the cataloguing of small finds, as well as to administrative and organizational duties. It is instructive that the first woman ever to direct an excavation on mainland Greece, Hetty Goldman, believed that the only reason she had been allowed to excavate at Halae was to get her as far from Athens as possible; so hostile to women excavators was the tone at the American School in 1911. Twenty years later, despite the fact that women were outshining the men who took the exams to win fellowships at the American School, it was proposed to establish a fixed ratio of fellowships between men and women, one that would award many more to men.
More: www.opensciencefair.eu/speakers/maria-georgopoulou
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Presentation abstract
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"Never doubt that a small group of committed citizens can change the world; indeed, it is the only thing that ever has" - Margaret Mead.
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Deep Software Variability and Frictionless Reproducibility
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The ability to recreate computational results with minimal effort and actionable metrics provides a solid foundation for scientific research and software development. When people can replicate an analysis at the touch of a button using open-source software, open data, and methods to assess and compare proposals, it significantly eases verification of results, engagement with a diverse range of contributors, and progress. However, we have yet to fully achieve this; there are still many sociotechnical frictions.
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I will then present some software engineering and AI techniques that can support the strategic exploration of variability spaces. These include the use of abstractions and models (e.g., feature models), sampling strategies (e.g., uniform, random), cost-effective measurements (e.g., incremental build of software configurations), and dimensionality reduction methods (e.g., transfer learning, feature selection, software debloating).
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Carbonyls undergo addition reactions with a large range of nucleophiles.
Comparing the relative basicity of the nucleophile and the product is extremely helpful in determining how reversible the addition reaction is. Reactions with Grignards and hydrides are irreversible. Reactions with weak bases like halides and carboxylates generally don’t happen.
Electronic effects (inductive effects, electron donation) have a large impact on reactivity.
Large groups adjacent to the carbonyl will slow the rate of reaction.
Neutral nucleophiles can also add to carbonyls, although their additions are generally slower and more reversible. Acid catalysis is sometimes employed to increase the rate of addition.
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ESR spectroscopy in liquid food and beverages.pptx
With increasing population, people need to rely on packaged food stuffs. Packaging of food materials requires the preservation of food. There are various methods for the treatment of food to preserve them and irradiation treatment of food is one of them. It is the most common and the most harmless method for the food preservation as it does not alter the necessary micronutrients of food materials. Although irradiated food doesn’t cause any harm to the human health but still the quality assessment of food is required to provide consumers with necessary information about the food. ESR spectroscopy is the most sophisticated way to investigate the quality of the food and the free radicals induced during the processing of the food. ESR spin trapping technique is useful for the detection of highly unstable radicals in the food. The antioxidant capability of liquid food and beverages in mainly performed by spin trapping technique.
Orion Air Quality Monitoring Systems - CWS
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
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OSFair2017 Workshop | Open data and infrastructures to support sustainable agri-food systems
- 1. OPEN DATA AND INFRASTRUCTURES TO SUPPORT SUSTAINABLE AGRI-FOOD SYSTEMS Mariateresa Lazzaro m.lazzaro@santannapisa.it Institute of Life Sciences, Scuola Superiore Sant’Anna (Pisa)
- 2. ‘When it comes to realising the full potential for open data, it is important to start with real world problems, and to engage with problem owners, and not simply focus on the data.’ Open Data Institute – GODAN: Global Open Data for Agriculture and Nutrition, 2015
- 3. The experience of CAPSELLA community Support open data driven participatory innovation in agriculture
- 4. ICT supporting biodiversity based agriculture Collective Awareness PlatformS for Environmentally sound Land management based on data technoLogies and Agrobiodiversity CAPS…
- 5. < FARMERS KNOWLEDGE >
- 6. CAPSELLA platform: our infrastructure Platform structure Metadata catalogue
- 7. Data FROM and TO the communities Agri-food Biodiversity DATA ├Develop a number of community- driven data powered ICT solutions ├Run pilots with communities ├Co-innovation with stakeholders
- 8. CAPSELLA experience with open data: Example 1 Cities in stars
- 9. Back to real challenges…
- 10. Communities involved CAPSELLA experience with open data: Example 2
- 11. RICH PICTURE EMERGING ISSUES PRIORITIES IN CAPSELLA SOIL HEALTH Data recording and sharing Participatory methodology Their challenge
- 12. SOIL HEALTH Selected challenge SPADE TEST - Qualitative method - Fast and free of charge - No need of technical support - Increases farmer awareness
- 13. SOILHEALTH.CAPSELLA.EU CAPSELLA PLATFORM SPADE TEST FUNCTION Desktop - tablet - smartphone Multilingual
- 15. Simulation of Soil Organic Matter Dynamics Data TO communities
- 16. Simulation of Soil Organic Matter Dynamics Data TO communities
- 17. Data FROM and TO the communities
- 18. Empower local knowledge with external information Facilitating local knowledge with information based on open data
- 19. www.capsella.eu @Capsella12 http://www.facebook.com/capsellaproject/ http://www.linkedin.com/groups/8524214 CAPSELLA @EFITA2017, July 2017, Montpellier Mariateresa Lazzaro m.lazzaro@santannapisa.it Institute of Life Sciences, Scuola Superiore Sant’Anna (Pisa)