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Facilitating tissue collection for translational research 
Jane Rogan 
Business Manager
MCRC Biobanking: The Basic Concept 
Make quality tissue collection and retrieval easy for the researcher 
•Regulatory Framework 
•Sample Collection Logistics 
•Sample Quality 
•Informatics 
•Sample Access
Collaborating Trusts 
MCRC Biobank 
Pennine Acute Hospitals Trust 
The Christie NHS Foundation Trust 
South Manchester NHS Foundation Trust 
Salford Royal NHS Foundation Trust 
HPB 
Breast 
Colorectal Skin Urology Gynaecology Haematological Malignancies 
Lung Breast Head & Neck Colorectal 
Breast Upper GI Urology Neurology
Building a successful Biobank
3% 
15% 
1% 
7% 
11% 
11% 
1% 
18% 
33% 
Collections By Disease Type - Solid Tumours 
Brain 
Breast 
Sarcoma 
Skin 
Colorectal 
Upper GI 
Gynae 
Urology 
Lung 
Donations from over 6000 patients
47% 
11% 
10% 
32% 
Collections By Disease Type - Blood Disorders 
AML 
B-ALL 
MDS 
Other 
Donations from 400 patients
Biobank Project Applications 
1 
13 
5 
4 
5 
2 
11 
6 
3 
1 
4 
8 
23 
Gynae 
Breast 
Colorectal 
Upper GI 
GU 
Lymphoma 
Haematology 
Lung 
Head and neck 
Neuro 
Melanoma 
Mixed Sample Types 
QC/Method Development 
0 
5 
10 
15 
20 
25 
Total Applications: 86 Total Approved: 75 Average Approval Time: 30 working days (median)
The “Six-Pack” 
1.Fresh Frozen Diseased Tissue 
2.Fresh Frozen Non-involved Tissue 
3.FFPE Disease Tissue 
4.FFPE Non-involved Tissue 
5.Pre-operative Blood sample 
6.Pre-operative Urine sample
Melanoma Tissue Collection Pathway 
Collect Fresh From Theatres 
Fresh Cut-Up in Pathology 
Diagnostic Sample 
Research Sample 
Mouse model of tumour 
Frozen Tissue for Nucleic Acid Extraction 
Fixed Tissue for Staining
Evolving the Collections 
Requirement 
Considerations 
Prospective Fresh Tissue 
•Availability of tissue 
•Staff available for sample delivery 
•Media for keeping samples viable 
Use for Animal Models 
•Specific consent for animal models 
•Size of tumour tissue 
Alternative Sample Types (fluids, plucked hair) 
•Routes / logistics of sample collection 
Serial Blood Collection inc CTCs 
•Biobank Technician presence in clinic 
Past samples (e.g. pre- treatment/primary tumours) 
•Specific consent 
•Requesting blocks from local hospitals 
Sampling tumour in different areas 
•Further input from pathology 
Clinical Trial Sample Collection 
•Space for sample storage 
•Different protocols for each trial
Biobank Projects by Type 
17 
39 
10 
8 
Fresh Tissue 
Banked Samples 
Archive FFPE/TMA 
Prospective Protocol 
Total Approved Projects By Type 
0 
2 
4 
6 
8 
10 
12 
14 
16 
Fresh Tissue 
Banked Samples 
Archive FFPE/TMA 
Prospective Protocol 
Active Projects By Type (Total 33*)
Tissue Microarrays 
•Current disease areas include prostate, bladder, lung 
•Link to clinical databases 
•Recently obtained Section 251 Support which allows the Biobank to link archival samples to clinical data 
•Support through Surgical Oncology Research Theme – Data Manager employed
External Projects utilising Biobank Resource 
•Stratified Medicine Programme – Phase 2 
–Lung focus 
–Biopsy samples from late stage patients 
•100k Genome Project 
–Lung, Colorectal, Prostate 
•TracerX 
–Facilitating sample collection 
•MesoBank 
–Mesothelioma
Research Biopsies 
•Working with clinical teams to introduce sample collection as a research only procedure 
•How tumours change over time 
•Comparing primary and metastatic tumours in patients 
•Research into why patients are relapsing on targeted treatments 
•Pilot to being in Malignant Melanoma - 2014
Key Success Drivers 
•Established network model with existing infrastructure and pathways for sample collection 
•Excellent clinical engagement across all cancer disease types 
•Robust governance framework for tissue and data 
•Proven track record of providing quality samples 
•Research needs drive the sample collection, not the other way round
Thank you 
http://www.mcrc.manchester.ac.uk/biobank/

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Let's Talk Research Annual Conference - 24th-25th September 2014 (Jane Rogan)

  • 1. Facilitating tissue collection for translational research Jane Rogan Business Manager
  • 2. MCRC Biobanking: The Basic Concept Make quality tissue collection and retrieval easy for the researcher •Regulatory Framework •Sample Collection Logistics •Sample Quality •Informatics •Sample Access
  • 3. Collaborating Trusts MCRC Biobank Pennine Acute Hospitals Trust The Christie NHS Foundation Trust South Manchester NHS Foundation Trust Salford Royal NHS Foundation Trust HPB Breast Colorectal Skin Urology Gynaecology Haematological Malignancies Lung Breast Head & Neck Colorectal Breast Upper GI Urology Neurology
  • 5.
  • 6. 3% 15% 1% 7% 11% 11% 1% 18% 33% Collections By Disease Type - Solid Tumours Brain Breast Sarcoma Skin Colorectal Upper GI Gynae Urology Lung Donations from over 6000 patients
  • 7. 47% 11% 10% 32% Collections By Disease Type - Blood Disorders AML B-ALL MDS Other Donations from 400 patients
  • 8. Biobank Project Applications 1 13 5 4 5 2 11 6 3 1 4 8 23 Gynae Breast Colorectal Upper GI GU Lymphoma Haematology Lung Head and neck Neuro Melanoma Mixed Sample Types QC/Method Development 0 5 10 15 20 25 Total Applications: 86 Total Approved: 75 Average Approval Time: 30 working days (median)
  • 9. The “Six-Pack” 1.Fresh Frozen Diseased Tissue 2.Fresh Frozen Non-involved Tissue 3.FFPE Disease Tissue 4.FFPE Non-involved Tissue 5.Pre-operative Blood sample 6.Pre-operative Urine sample
  • 10. Melanoma Tissue Collection Pathway Collect Fresh From Theatres Fresh Cut-Up in Pathology Diagnostic Sample Research Sample Mouse model of tumour Frozen Tissue for Nucleic Acid Extraction Fixed Tissue for Staining
  • 11. Evolving the Collections Requirement Considerations Prospective Fresh Tissue •Availability of tissue •Staff available for sample delivery •Media for keeping samples viable Use for Animal Models •Specific consent for animal models •Size of tumour tissue Alternative Sample Types (fluids, plucked hair) •Routes / logistics of sample collection Serial Blood Collection inc CTCs •Biobank Technician presence in clinic Past samples (e.g. pre- treatment/primary tumours) •Specific consent •Requesting blocks from local hospitals Sampling tumour in different areas •Further input from pathology Clinical Trial Sample Collection •Space for sample storage •Different protocols for each trial
  • 12. Biobank Projects by Type 17 39 10 8 Fresh Tissue Banked Samples Archive FFPE/TMA Prospective Protocol Total Approved Projects By Type 0 2 4 6 8 10 12 14 16 Fresh Tissue Banked Samples Archive FFPE/TMA Prospective Protocol Active Projects By Type (Total 33*)
  • 13. Tissue Microarrays •Current disease areas include prostate, bladder, lung •Link to clinical databases •Recently obtained Section 251 Support which allows the Biobank to link archival samples to clinical data •Support through Surgical Oncology Research Theme – Data Manager employed
  • 14. External Projects utilising Biobank Resource •Stratified Medicine Programme – Phase 2 –Lung focus –Biopsy samples from late stage patients •100k Genome Project –Lung, Colorectal, Prostate •TracerX –Facilitating sample collection •MesoBank –Mesothelioma
  • 15. Research Biopsies •Working with clinical teams to introduce sample collection as a research only procedure •How tumours change over time •Comparing primary and metastatic tumours in patients •Research into why patients are relapsing on targeted treatments •Pilot to being in Malignant Melanoma - 2014
  • 16. Key Success Drivers •Established network model with existing infrastructure and pathways for sample collection •Excellent clinical engagement across all cancer disease types •Robust governance framework for tissue and data •Proven track record of providing quality samples •Research needs drive the sample collection, not the other way round