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Abstract
Graphs are the most native format to represent the data, it has built-in structure to store the contextual information and enable
data analysts to get better answers for their queries, data engineers to easily extend their eco-system, and data scientists to build
enhanced models. We can make informed decisions. In this presentation, you will learn about the evolution of the Graphs with a
review on knowledge graphs, path finding, clustering, and recommendation algorithms, how they are built and their use cases.
Also, we will review the challenges we face as processing more data comes with a cost, and how they are solved in different faces
of the machine learning lifecycle.
Evolution of Graph
Algorithms – Benefits
and Challenges
By Ebru Cucen
@ebrucucen
2/12/2021
Throughout this talk, I will show graphs in two representations with
- Left Hand Side : the data
- Right Hand Side : the schema
Goal
Graphs are
the most
native data
format
Graphs are
useful for all
roles in the
data habitat
Graphs
opened a
new era in
ML
Historical Timeline
Euler’s
Koninsberg
bridge
“Graph”
introduced
PageRank
Google’s
Knowledge
Graph
Semantic Web
Facebook’s
Entities
Graph
Yahoo’s
Knowledge
Graph
Gori, GNN
McCulloch-Pitts
Neural Nets
DeepMind
Kipf,GCN
1878
1735 1998 1999 2013
2012
2005 2016
2010
1943
Interest in Research
*Title and Abstract search at Dimensions.ai
“Graph” and “Neural” and “Network” *
“Graph” and “Network” *
Roles
Data Analysts
Data/ML Engineers
Data Scientists
# Knowledge Graphs
Let’s ask
https://cacm.acm.org/magazines/2019/8/238342-industry-scale-knowledge-graphs/fulltext
Users
- Ebay
- Product recommendation: node and link similarity
- Microsoft
- Bing Knowledge Graph: Q&A
- Academic Graph
- LinkedIn Graph
- IBM
- Watson Discovery
- Extend core Knowledge Graph
- Facebook
- Social Network Analysis
World Avatar
https://www.sciencedirect.com/science/article/abs/pii/S0098135419301589
http://dx.doi.org/10.1016/j.compchemeng.2019.106586
# Graph Algorithms
Basic Cypher Queries
MATCH p=(t:Talk)-[r:IS_GIVEN_BY]->(s:Speaker)
WHERE s.name= “Geoffrey” AND s.surname= “Hinton” RETURN p
Basic Cypher Queries
MATCH p=(g:Guest)-[r:ATTENDS]->(t:Talk)
WHERE s.name= “A” AND s.surname= “Hinton” RETURN p
Basic Cypher Queries
MATCH p=(s:Speaker)<-[:IS_GIVEN_BY]-(t:Talk)<-[:ATTENDS]-(g:Guest)
WHERE s.name="Geoffrey" and s.surname="Hinton"
RETURN p
Demo
Hume visualisation
E2E Process
What is the shortest path from Victoria to Liverpool Street Station?
Inherently Graph
Use cases
● Telephone network
● Internet packet routing
● Manufacturing
https://www.sciencedirect.com/science/article/abs/pii/S1570826818300672
Inherently Graph
Use cases
● Telephone network
● Internet packet routing
● Manufacturing
● Human Brain
● Neural nets are networks
# Graph Neural Networks
ML - 101
X
Input
=Layer 0
Output
1ST
Layer=Z[1]
Z ŷ
y = mx + b
ML - 101 - Forward Propagation
x1
x2
Input
=Layer 0
Output
1ST
Layer=Z[1]
Z1
ŷ
Z2
y = w1
x1
+ w2
x2
+ b
ML - 101 Backward Propagation
x1
x2
Input
=Layer 0
Output
1ST
Layer=Z[1]
Z1
ŷ
Z2
y = w1
x1
+ w2
x2
+ b
ML - 101 Model & Prediction
x1
x2
Input
=Layer 0
Output
1ST
Layer=Z[1]
Z1
Z2
ŷ
X =
x1 # of Beds
x2 PostCode
y = House sales price
Neural Networks - 101
x1
x2
Input
=Layer 0
Output
1ST
Layer=Z[1]
X =
z1
1
z1
2
z1
3
a1
1
a1
2
a1
3
a2
z2
ŷ
a3
z3
a2
z2
z1
4
2ND
Layer=Z[2]
3RD
Layer=Z[3]
X1
X2
a1
4
Neural Networks - 101
x1
x2
Input
=Layer 0
Output
1ST
Layer=Z[1]
X =
z1
1
z1
2
z1
3
a1
1
a1
2
a1
3
a2
z2
ŷ
a3
z3
a2
z2
a
2
z2
2ND
Layer=Z[2]
3RD
Layer=Z[3]
X1
X2
z= ∑Wi
xi
+ b
z= ∑Wx1
+ ∑Wx2
+ b
X =
a= σ(Z)
Z[1]
=
z11
z12
z21
z22
z31
z32
z41
z42
X1
X2
Layer 0 Output
1 Layer=Z[1]
a2
ŷ
Challenge
Karate Club
Karate Club
- Adjacency List
- Adjacency Matrix
N1 N2 N3
N1
N2
N3
Representing Graphs
https://distill.pub/2021/gnn-intro/
https://github.com/distillpub/post--gnn-intro
Clustering
Original Graph
https://arxiv.org/pdf/1609.02907.pdf
Greedy Clustering
https://doi.ieeecomputersociety.org/10.1109/TKDE.2007.190689
GCN
GCN
- Kipf(2007)*
https://arxiv.org/abs/1609.02907
GCN
GCN
- Kipf(2007)*
https://pytorch-geometric.readthedocs.io/en/latest/modules/nn.html
https://arxiv.org/abs/1609.02907
Torch.Geometric GCNConv
Karate club with GCN
Final Output
Karate club with GCN
Put original graph
Calculating Loss Function
Node/Edge/Graph classification
Zi
=f(hi
) Zij
=f(hi
,hj
,eij
) ZG
=f(∑i
hi)
Calculating Loss Function
Node/Edge/Graph classification
Zi
=f(hi
) Zij
=f(hi
,hj
,eij
) ZG
=f(∑i
hi)
Random Walks
- Drunk person walking
- Equal probability of paths to adjacent nodes
- Max uncertainty (local entropy)
- Measure structure of graph
- Sampling
# Summary
Conclusion
• Graph is the most native data format with built-in
semantic
• Graph opened a new era in machine learning none
of us can ignore
• Graph is very useful for all roles for E2E process
# Questions

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Evolution of Graph Algorithms – Benefits and Challenges